; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016613 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016613
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:39563767..39564123
RNA-Seq ExpressionLag0016613
SyntenyLag0016613
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_040190049.1 extensin-1-like [Rana temporaria]4.0e-0637.61Show/hide
Query:  IMVIPPPKHHGHPTS------------QASWSSQGCGPTSQASWSSHLPSIMVIPPPKHHGHPTSQASWSSHLPSIMVIPPPKHHGHPRGAEVP-NGHPR
        IM  P   HHG PTS             A   S    P S  SW+ H   IM  PP  HHG PT  +SW+ H   IM  PP  HHG P    VP +G P 
Subjt:  IMVIPPPKHHGHPTS------------QASWSSQGCGPTSQASWSSHLPSIMVIPPPKHHGHPTSQASWSSHLPSIMVIPPPKHHGHPRGAEVP-NGHPR

Query:  GAGVRHRKFPSKHHGHP
              R     +HG P
Subjt:  GAGVRHRKFPSKHHGHP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATCCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCAGGGGTGCGGTCCCACCTCCCAAGCATC
ATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCC
CACCTCCCAAGCATCATGGTCATCCCAGGGGTGCGGAAGTTCCCAATGGTCATCCCAGGGGTGCAGGGGTGCGTCATCGGAAGTTCCCAAGCAAGCATCATGGTCATCCC
AAGGGTGCGTACACTGGGAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATCCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCAGGGGTGCGGTCCCACCTCCCAAGCATC
ATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCCCACCTCCCAAGCATCATGGTCATCC
CACCTCCCAAGCATCATGGTCATCCCAGGGGTGCGGAAGTTCCCAATGGTCATCCCAGGGGTGCAGGGGTGCGTCATCGGAAGTTCCCAAGCAAGCATCATGGTCATCCC
AAGGGTGCGTACACTGGGAAAAGATGA
Protein sequenceShow/hide protein sequence
MVILPSIMVIPPPKHHGHPTSQASWSSQGCGPTSQASWSSHLPSIMVIPPPKHHGHPTSQASWSSHLPSIMVIPPPKHHGHPRGAEVPNGHPRGAGVRHRKFPSKHHGHP
KGAYTGKR