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Lag0016624 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016624
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZnMc domain-containing protein
Genome locationchr12:39649128..39649645
RNA-Seq ExpressionLag0016624
SyntenyLag0016624
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599050.1 Metalloendoproteinase 3-MMP, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2275.34Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCGIADIING SSMNSG + + HNATRFHSVSHYSFFPGRPRWP  RR LTY FAPEN L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

KAG7029995.1 Metalloendoproteinase 2-MMP, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-2275.34Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCGIADIING SSMNSG + + HNATRFHSVSHYSFFPGRPRWP  RR LTY FAPEN L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

XP_022946065.1 metalloendoproteinase 5-MMP-like [Cucurbita moschata]4.1e-2275.34Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCGIADIING SSMNSG + + HNATRFHSVSHYSFFPGRPRWP  RR LTY FAPEN L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

XP_022999578.1 metalloendoproteinase 2-MMP [Cucurbita maxima]4.1e-2275.34Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCGIADIING SSMNSG + + HNATRFHSVSHYSFFPGRPRWP  RR LTY FAPEN L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

XP_038889498.1 metalloendoproteinase 2-MMP [Benincasa hispida]2.4e-2273.97Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCGI DIIN +SSMNSGK T GH+AT FHSVSHYSFFPGRP WP+ RR+LTY FAPEN LSD+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

TrEMBL top hitse value%identityAlignment
A0A2I4DZR6 metalloendoproteinase 2-MMP-like6.3e-2163.51Show/hide
Query:  ARCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        +RCG+ DI+NG+++MNSGK T   N+T FH+VSHYSFFPG PRWP  +R LTY F PENQLS+DVK VF R  +
Subjt:  ARCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

A0A2P5BCN4 Peptidase M10A2.4e-2067.57Show/hide
Query:  RCGIADIINGTSSMNSGK-TTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCG ADI+NGT++MNSGK TT   N+TRFH+V H+SFFPG P WP  RR LTY F PEN+LSD+VKAVFGR  +
Subjt:  RCGIADIINGTSSMNSGK-TTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

A0A6A1V9G6 Metalloendoproteinase 11.7e-2165.75Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCG+ DI+NG++SMNSGKTT   N+T+FH+VSHY+FF G+PRWP ++R LTY F PENQLSDDVK+VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

A0A6J1G2R8 metalloendoproteinase 5-MMP-like2.0e-2275.34Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCGIADIING SSMNSG + + HNATRFHSVSHYSFFPGRPRWP  RR LTY FAPEN L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

A0A6J1KK37 metalloendoproteinase 2-MMP2.0e-2275.34Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCGIADIING SSMNSG + + HNATRFHSVSHYSFFPGRPRWP  RR LTY FAPEN L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP3.2e-1447.95Show/hide
Query:  RCGIADIINGTSSMNSGKT---TMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGR
        RCG  D++NGTS M+ G+     +  + T  H+V  Y+ FPG PRWP +RR LTY F P+N L+++VK+VF R
Subjt:  RCGIADIINGTSSMNSGKT---TMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGR

O23507 Metalloendoproteinase 1-MMP4.0e-0436.14Show/hide
Query:  SLPDSARCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQL----SDDVKAVFGRVLS
        SLP   RCG++D            T M  N    H+ +HY++F G+P+W  +R  LTY  +  ++L    S+DVK VF R  S
Subjt:  SLPDSARCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQL----SDDVKAVFGRVLS

Q5XF51 Metalloendoproteinase 3-MMP6.3e-1853.25Show/hide
Query:  RCGIADIINGTSSMNSGKTT----MGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCG  D++NGTS+M+SG+ T          RFH+V HYSFFPG PRWP +RR LTY F P N L+++VK+VF R  +
Subjt:  RCGIADIINGTSSMNSGKTT----MGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

Q9ZUJ5 Metalloendoproteinase 5-MMP1.2e-1349.32Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCG  D+I+G S MN GK           +   YSFFPG+PRWP  +R LTY FAP+N L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein4.5e-1953.25Show/hide
Query:  RCGIADIINGTSSMNSGKTT----MGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCG  D++NGTS+M+SG+ T          RFH+V HYSFFPG PRWP +RR LTY F P N L+++VK+VF R  +
Subjt:  RCGIADIINGTSSMNSGKTT----MGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

AT1G59970.1 Matrixin family protein8.7e-1549.32Show/hide
Query:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS
        RCG  D+I+G S MN GK           +   YSFFPG+PRWP  +R LTY FAP+N L+D+VK VF R  +
Subjt:  RCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGRVLS

AT1G70170.1 matrix metalloproteinase2.3e-1547.95Show/hide
Query:  RCGIADIINGTSSMNSGKT---TMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGR
        RCG  D++NGTS M+ G+     +  + T  H+V  Y+ FPG PRWP +RR LTY F P+N L+++VK+VF R
Subjt:  RCGIADIINGTSSMNSGKT---TMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVKAVFGR

AT4G16640.1 Matrixin family protein2.8e-0536.14Show/hide
Query:  SLPDSARCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQL----SDDVKAVFGRVLS
        SLP   RCG++D            T M  N    H+ +HY++F G+P+W  +R  LTY  +  ++L    S+DVK VF R  S
Subjt:  SLPDSARCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQL----SDDVKAVFGRVLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTCTTCCCCAACGTCTCCTCAATCCCAGACTGGCTAAACAAAACCAAGTGCGCTTGGGACGAATTCCAGAAGCTCAAAGGTTGCCGCCCTGGCTACCTCGACT
ACAAGACTCTCTCCCAGATTCAGCTCGATGCGGCATCGCCGACATAATCAACGGAACAAGTTCCATGAATTCCGGGAAGACCACCATGGGACATAACGCCACTCGCTTTC
ACTCTGTTTCTCACTACTCTTTCTTCCCCGGCCGCCCGCGCTGGCCGGCGGATCGACGGTATTTGACCTATGGGTTTGCACCGGAGAATCAGCTTTCTGATGACGTCAAG
GCAGTCTTTGGACGAGTTTTGTCCTATTTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGTCTTCCCCAACGTCTCCTCAATCCCAGACTGGCTAAACAAAACCAAGTGCGCTTGGGACGAATTCCAGAAGCTCAAAGGTTGCCGCCCTGGCTACCTCGACT
ACAAGACTCTCTCCCAGATTCAGCTCGATGCGGCATCGCCGACATAATCAACGGAACAAGTTCCATGAATTCCGGGAAGACCACCATGGGACATAACGCCACTCGCTTTC
ACTCTGTTTCTCACTACTCTTTCTTCCCCGGCCGCCCGCGCTGGCCGGCGGATCGACGGTATTTGACCTATGGGTTTGCACCGGAGAATCAGCTTTCTGATGACGTCAAG
GCAGTCTTTGGACGAGTTTTGTCCTATTTTGTTTAA
Protein sequenceShow/hide protein sequence
MQSLPQRLLNPRLAKQNQVRLGRIPEAQRLPPWLPRLQDSLPDSARCGIADIINGTSSMNSGKTTMGHNATRFHSVSHYSFFPGRPRWPADRRYLTYGFAPENQLSDDVK
AVFGRVLSYFV