; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016679 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016679
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr12:40231950..40232351
RNA-Seq ExpressionLag0016679
SyntenyLag0016679
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.1e-1742.25Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSETFNSKP--VEA
        M P+P I  VFSL+IQE Q+ +   ++P   + + L +A +     +   R  + +R  CS+C IKGH  DKCYK H YPP YK RNS +  + P   + 
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSETFNSKP--VEA

Query:  NVVTQPQS-------NFFSSLKQTQYSQLIEMLNTHLQAAKT
        N V    S       +FFSSL   QYSQL+ +LN HLQAA T
Subjt:  NVVTQPQS-------NFFSSLKQTQYSQLIEMLNTHLQAAKT

KAA8517066.1 hypothetical protein F0562_017116 [Nyssa sinensis]1.4e-1537.5Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA----------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSET
        M+PIP I +VFSLI+QE Q+   +  S +S++  T+  A            S+  N++  +  +  R  C+HC I GH +D+CYK+H YPP YKFR++  
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA----------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSET

Query:  FN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHL
         N  +  V  +     QSN    F  +L   QY QL+ ML+THL
Subjt:  FN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHL

KAA8523936.1 hypothetical protein F0562_010359 [Nyssa sinensis]1.1e-1534.67Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN
        M+P+P I +VFSLI+QE Q+   +  S +S++  T+  A             + S+  N++  +  +  +  C+HC I+GH +D+CYK+H YPP YKFR+
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN

Query:  SETFNSKPVEANVVTQ--PQSN----FFSSLKQTQYSQLIEMLNTHLQAA
        +  FN+   + +       QSN    F  +L   QY QL+ ML+THL ++
Subjt:  SETFNSKPVEANVVTQ--PQSN----FFSSLKQTQYSQLIEMLNTHLQAA

KAA8535110.1 hypothetical protein F0562_030113 [Nyssa sinensis]2.4e-1534.67Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN
        M+P+P I +VFSLI+QE Q+   +  S +S++  T+  A             + S+  N++  +  +  ++ C HC I+GH +D+CYK+H YPP YKFR+
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN

Query:  SETFN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHLQAA
        +   N  +  V  +     QSN    F  +L   QY QL+ ML+THL ++
Subjt:  SETFN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHLQAA

XP_022145891.1 uncharacterized protein LOC111015239 [Momordica charantia]7.1e-2042.77Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN-----------SE
        M+PIP + KVFSL+IQE ++ A   I+P   + + + VAE S++ +  +FRR +N R  C+HC ++GH +DKCYKLH YPP Y+  N           + 
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN-----------SE

Query:  TFNSKPVEANVVT------------QPQSN----FFSSLKQTQYSQLIEMLNTHLQAAK
        T +S  V AN V+            Q  SN    FF+SL  +QYSQL+EML +HLQAAK
Subjt:  TFNSKPVEANVVT------------QPQSN----FFSSLKQTQYSQLIEMLNTHLQAAK

TrEMBL top hitse value%identityAlignment
A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 85.5e-1842.25Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSETFNSKP--VEA
        M P+P I  VFSL+IQE Q+ +   ++P   + + L +A +     +   R  + +R  CS+C IKGH  DKCYK H YPP YK RNS +  + P   + 
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSETFNSKP--VEA

Query:  NVVTQPQS-------NFFSSLKQTQYSQLIEMLNTHLQAAKT
        N V    S       +FFSSL   QYSQL+ +LN HLQAA T
Subjt:  NVVTQPQS-------NFFSSLKQTQYSQLIEMLNTHLQAAKT

A0A5J4ZHF9 Uncharacterized protein6.7e-1637.5Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA----------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSET
        M+PIP I +VFSLI+QE Q+   +  S +S++  T+  A            S+  N++  +  +  R  C+HC I GH +D+CYK+H YPP YKFR++  
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA----------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSET

Query:  FN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHL
         N  +  V  +     QSN    F  +L   QY QL+ ML+THL
Subjt:  FN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHL

A0A5J5A1K4 Retrotrans_gag domain-containing protein5.1e-1634.67Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN
        M+P+P I +VFSLI+QE Q+   +  S +S++  T+  A             + S+  N++  +  +  +  C+HC I+GH +D+CYK+H YPP YKFR+
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN

Query:  SETFNSKPVEANVVTQ--PQSN----FFSSLKQTQYSQLIEMLNTHLQAA
        +  FN+   + +       QSN    F  +L   QY QL+ ML+THL ++
Subjt:  SETFNSKPVEANVVTQ--PQSN----FFSSLKQTQYSQLIEMLNTHLQAA

A0A5J5AXR3 Uncharacterized protein1.1e-1534.67Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN
        M+P+P I +VFSLI+QE Q+   +  S +S++  T+  A             + S+  N++  +  +  ++ C HC I+GH +D+CYK+H YPP YKFR+
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVA-------------EASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN

Query:  SETFN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHLQAA
        +   N  +  V  +     QSN    F  +L   QY QL+ ML+THL ++
Subjt:  SETFN--SKPVEANVVTQPQSN----FFSSLKQTQYSQLIEMLNTHLQAA

A0A6J1CXR2 uncharacterized protein LOC1110152393.4e-2042.77Show/hide
Query:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN-----------SE
        M+PIP + KVFSL+IQE ++ A   I+P   + + + VAE S++ +  +FRR +N R  C+HC ++GH +DKCYKLH YPP Y+  N           + 
Subjt:  MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRN-----------SE

Query:  TFNSKPVEANVVT------------QPQSN----FFSSLKQTQYSQLIEMLNTHLQAAK
        T +S  V AN V+            Q  SN    FF+SL  +QYSQL+EML +HLQAAK
Subjt:  TFNSKPVEANVVT------------QPQSN----FFSSLKQTQYSQLIEMLNTHLQAAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTATTCCTGACATTACTAAGGTGTTTTCGCTGATTATTCAAGAACATCAGAGAATTGCGGGTAGTTATATTTCGCCTACTTCCTCTAATCAGATAACTCTTCT
TGTTGCTGAAGCCTCTGAGAAACAAAACAATAATCGTTTTAGAAGGAATGAAAATCAAAGGATCGTGTGTTCTCATTGCAATATTAAGGGTCATGCACTGGATAAATGCT
ATAAGTTGCACATATATCCACCTAGCTACAAGTTTCGAAACTCCGAGACGTTTAATTCTAAGCCTGTTGAAGCCAATGTAGTCACTCAGCCTCAGTCGAATTTTTTCTCC
AGCCTCAAACAAACTCAGTATAGTCAATTGATTGAAATGCTCAACACTCACTTACAAGCAGCTAAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTATTCCTGACATTACTAAGGTGTTTTCGCTGATTATTCAAGAACATCAGAGAATTGCGGGTAGTTATATTTCGCCTACTTCCTCTAATCAGATAACTCTTCT
TGTTGCTGAAGCCTCTGAGAAACAAAACAATAATCGTTTTAGAAGGAATGAAAATCAAAGGATCGTGTGTTCTCATTGCAATATTAAGGGTCATGCACTGGATAAATGCT
ATAAGTTGCACATATATCCACCTAGCTACAAGTTTCGAAACTCCGAGACGTTTAATTCTAAGCCTGTTGAAGCCAATGTAGTCACTCAGCCTCAGTCGAATTTTTTCTCC
AGCCTCAAACAAACTCAGTATAGTCAATTGATTGAAATGCTCAACACTCACTTACAAGCAGCTAAAACATAG
Protein sequenceShow/hide protein sequence
MNPIPDITKVFSLIIQEHQRIAGSYISPTSSNQITLLVAEASEKQNNNRFRRNENQRIVCSHCNIKGHALDKCYKLHIYPPSYKFRNSETFNSKPVEANVVTQPQSNFFS
SLKQTQYSQLIEMLNTHLQAAKT