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Lag0016747 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016747
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionclassical arabinogalactan protein 25
Genome locationchr12:40861702..40862127
RNA-Seq ExpressionLag0016747
SyntenyLag0016747
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575045.1 hypothetical protein SDJN03_25684, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4373.76Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK                    SS FQELSPDIAPLLPS+G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSP GLPGSFAAPK+LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_022138732.1 classical arabinogalactan protein 25 [Momordica charantia]6.5e-4881.12Show/hide
Query:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP
        MASFWYCSALIMAFMAS LLALP  SL NPKSSTI SASPS  T T+ P+P SPFQELSP+IAPLLPS G +IPSATGSIPTIPSNPSPPNPDEFEAP P
Subjt:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP

Query:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        D SALSPFGLPGSFA P ALPW  NSLLLL+G AL+ FSL LH
Subjt:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_022958905.1 classical arabinogalactan protein 25-like [Cucurbita moschata]5.4e-4273.05Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMA MASPLLALPSLPNPK                    SS FQELSPDIAPLLPS+G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSP GLPGSFAAPK LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_023006472.1 classical arabinogalactan protein 25-like [Cucurbita maxima]5.4e-4275.18Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK       SPS             FQELSPDIAPLLPSTG +IPSATGSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSPFGLPGSFAAPK LP   NS LLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_023547783.1 classical arabinogalactan protein 25-like [Cucurbita pepo subsp. pepo]2.2e-4374.47Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK                    SS FQELSPDIAPLLPS+G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSPFGLPGSFAAPK LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

TrEMBL top hitse value%identityAlignment
A0A1S3C8K2 classical arabinogalactan protein 252.4e-4072.03Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD
        MASFWYCSA+IM FMASPLLALPS+PN                   PKPSSPFQELSP+IAPLLPSTG  IPSATG SIPTIPSNPSPPNPD+FEA GPD
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD

Query:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH
        SSALSPFGLPGSFA P +LP   N  LLLL+GLAL  FS+HLH
Subjt:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH

A0A5A7SSC0 Classical arabinogalactan protein 252.4e-4072.03Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD
        MASFWYCSA+IM FMASPLLALPS+PN                   PKPSSPFQELSP+IAPLLPSTG  IPSATG SIPTIPSNPSPPNPD+FEA GPD
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD

Query:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH
        SSALSPFGLPGSFA P +LP   N  LLLL+GLAL  FS+HLH
Subjt:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH

A0A6J1CBZ0 classical arabinogalactan protein 253.2e-4881.12Show/hide
Query:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP
        MASFWYCSALIMAFMAS LLALP  SL NPKSSTI SASPS  T T+ P+P SPFQELSP+IAPLLPS G +IPSATGSIPTIPSNPSPPNPDEFEAP P
Subjt:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP

Query:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        D SALSPFGLPGSFA P ALPW  NSLLLL+G AL+ FSL LH
Subjt:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

A0A6J1H4T0 classical arabinogalactan protein 25-like2.6e-4273.05Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMA MASPLLALPSLPNPK                    SS FQELSPDIAPLLPS+G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSP GLPGSFAAPK LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

A0A6J1KVY5 classical arabinogalactan protein 25-like2.6e-4275.18Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK       SPS             FQELSPDIAPLLPSTG +IPSATGSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSPFGLPGSFAAPK LP   NS LLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

SwissProt top hitse value%identityAlignment
Q6NN00 Classical arabinogalactan protein 251.5e-0744.68Show/hide
Query:  FLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL
        F++ +S     S  Q+LSP+IAPLLPS G ++PS  GS  TIPS+PSPP+PD  +   PD  A SPF  P   ++P   P  P++ +LL  L +
Subjt:  FLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL

Arabidopsis top hitse value%identityAlignment
AT5G18690.1 arabinogalactan protein 251.1e-0844.68Show/hide
Query:  FLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL
        F++ +S     S  Q+LSP+IAPLLPS G ++PS  GS  TIPS+PSPP+PD  +   PD  A SPF  P   ++P   P  P++ +LL  L +
Subjt:  FLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTTTTGGTATTGTTCAGCACTCATTATGGCTTTCATGGCCTCACCTTTGCTTGCTTTACCATCTCTACCCAATCCAAAATCCTCCACCATCAACTCAGCCTC
GCCATCATTTTTGACCGCCACCAGTCCTCCCAAGCCCAGCTCGCCTTTTCAAGAACTCTCCCCTGACATTGCTCCATTGTTGCCTTCTACAGGCGCTAGCATTCCTTCTG
CAACTGGTTCTATTCCCACCATTCCCTCTAACCCCAGCCCTCCAAATCCAGACGAGTTCGAGGCGCCTGGCCCTGATTCATCCGCCCTCTCGCCATTTGGCCTACCGGGT
TCCTTCGCGGCACCTAAAGCCCTGCCTTGGTCTCCAAATTCGCTTCTTCTTCTATCTGGCTTAGCACTATATGGCTTCTCTCTGCACTTACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCTTTTGGTATTGTTCAGCACTCATTATGGCTTTCATGGCCTCACCTTTGCTTGCTTTACCATCTCTACCCAATCCAAAATCCTCCACCATCAACTCAGCCTC
GCCATCATTTTTGACCGCCACCAGTCCTCCCAAGCCCAGCTCGCCTTTTCAAGAACTCTCCCCTGACATTGCTCCATTGTTGCCTTCTACAGGCGCTAGCATTCCTTCTG
CAACTGGTTCTATTCCCACCATTCCCTCTAACCCCAGCCCTCCAAATCCAGACGAGTTCGAGGCGCCTGGCCCTGATTCATCCGCCCTCTCGCCATTTGGCCTACCGGGT
TCCTTCGCGGCACCTAAAGCCCTGCCTTGGTCTCCAAATTCGCTTCTTCTTCTATCTGGCTTAGCACTATATGGCTTCTCTCTGCACTTACATTGA
Protein sequenceShow/hide protein sequence
MASFWYCSALIMAFMASPLLALPSLPNPKSSTINSASPSFLTATSPPKPSSPFQELSPDIAPLLPSTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPG
SFAAPKALPWSPNSLLLLSGLALYGFSLHLH