; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016760 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016760
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr12:40977606..40979933
RNA-Seq ExpressionLag0016760
SyntenyLag0016760
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033753.1 protein Ycf2-like [Cucumis melo var. makuwa]8.7e-3246.75Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------NEGFVYAILAWAYEVIPTLSAPPTNYARKIR
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LES+L+P  +     W+           + GF++ ILAWAYEVIPTLS PP  +A KI 
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------NEGFVYAILAWAYEVIPTLSAPPTNYARKIR

Query:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
        N VPR+INW +DTQ +W++L  K+F SP+LEV P+  T +++ MPYF PF+E E
Subjt:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]7.6e-2839.13Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------------------------------------N
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LES+L+P+QE P   W+                                          
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------------------------------------N

Query:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
         GF++ ILAWAYEVIPTLS PP  +  +I N VPR+IN  +DTQ +W++L  K+F SP+LEV P+  T  E+ MP+F PF+E E
Subjt:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]9.9e-2839.46Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR-----------------------------------------
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LES+L+P+QE     W+                                          
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR-----------------------------------------

Query:  NEGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
          GF++ ILAWAYEVIPTLS PP  +A +I N VPR+INW +DTQ +W++L  K+F SP+LEV P+  T  E+ MP+F PF E E
Subjt:  NEGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]5.4e-2639.13Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLW-----------------------------NRN-----------
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LE +L+P+QE     W                             NR            
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLW-----------------------------NRN-----------

Query:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
         GF++ ILAWAYEVIPTLS PP  +A +I N VPR+INW +D Q +W++L  K+F S +LEV P+  T  E+ MP+F PF+E E
Subjt:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]3.6e-3046.75Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQE----------KPRKLWNRNEGFVYAILAWAYEVIPTLSAPPTNYARKIR
        R K  YF   K + R+ LNI+F       + D +KMA+LY LES+L+P+QE             K W+ + G  + IL WAYEVIPTLS PP   A +I 
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQE----------KPRKLWNRNEGFVYAILAWAYEVIPTLSAPPTNYARKIR

Query:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
        N VPR+INW +DTQ +W++L  K+F SP+LEV P+  T  E+ MPYF PF+E E
Subjt:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

TrEMBL top hitse value%identityAlignment
A0A5A7STD7 Protein Ycf2-like4.2e-3246.75Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------NEGFVYAILAWAYEVIPTLSAPPTNYARKIR
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LES+L+P  +     W+           + GF++ ILAWAYEVIPTLS PP  +A KI 
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------NEGFVYAILAWAYEVIPTLSAPPTNYARKIR

Query:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
        N VPR+INW +DTQ +W++L  K+F SP+LEV P+  T +++ MPYF PF+E E
Subjt:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

A0A5A7U047 Protein Ycf2-like3.7e-2839.13Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------------------------------------N
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LES+L+P+QE P   W+                                          
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR----------------------------------------N

Query:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
         GF++ ILAWAYEVIPTLS PP  +  +I N VPR+IN  +DTQ +W++L  K+F SP+LEV P+  T  E+ MP+F PF+E E
Subjt:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

A0A5D3CEX9 Protein Ycf2-like4.8e-2839.46Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR-----------------------------------------
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LES+L+P+QE     W+                                          
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNR-----------------------------------------

Query:  NEGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
          GF++ ILAWAYEVIPTLS PP  +A +I N VPR+INW +DTQ +W++L  K+F SP+LEV P+  T  E+ MP+F PF E E
Subjt:  NEGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

A0A5D3DCN3 Protein Ycf2-like2.6e-2639.13Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLW-----------------------------NRN-----------
        R K  YF+  K V R+ LN++F     G + D +KMA+LY LE +L+P+QE     W                             NR            
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLW-----------------------------NRN-----------

Query:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
         GF++ ILAWAYEVIPTLS PP  +A +I N VPR+INW +D Q +W++L  K+F S +LEV P+  T  E+ MP+F PF+E E
Subjt:  EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

A0A5D3E3E8 Protein Ycf2-like1.8e-3046.75Show/hide
Query:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQE----------KPRKLWNRNEGFVYAILAWAYEVIPTLSAPPTNYARKIR
        R K  YF   K + R+ LNI+F       + D +KMA+LY LES+L+P+QE             K W+ + G  + IL WAYEVIPTLS PP   A +I 
Subjt:  RFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQE----------KPRKLWNRNEGFVYAILAWAYEVIPTLSAPPTNYARKIR

Query:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE
        N VPR+INW +DTQ +W++L  K+F SP+LEV P+  T  E+ MPYF PF+E E
Subjt:  NTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCCGATAAAAATGTATCGAAGCGATCGAGCCAAAGGTTAAAAGCGGCTGGAGTGACGCCCGGAAAGAAACACCCCCCACAGACATCCCCCATCACGTTGGACAG
CGCCCAAGAGTCCGAGGGTGAGGAAGCCGAAATGAGCACTGTCGATTCGGAGGAAAACGACACAAGCGATGGCACGGACGGAGACCATTCAGAAAACGACGATTTTACCA
CGAGCGATAGTGGAGACGAGGAACCGAGCAAGAAAAACCGAAGAGTAGACAGAAAGGGTTCGAAGGCCGACAAACGAAAGGGCAAGAGGGAACAAAAAGATGAAATTGAG
GAGGTTGAGCACACCAGAGCGGACGATGACTACTTCATGCCGCTCTCGAAACGCAGCAAAGCTCTGAAAATTAATCTCTGCACCAAAGCCGACATTATGGACCACATCCG
CCGGACATTGGGTGATAAATACAAGCTGCAGGAGTGTTCAAGATTTAAGGCCGAGTATTTTGATGAAGGCAAGGGAGTAAAAAGGAAGACTCTCAACATCATATTCAAAG
CAATAAAGCACGGTGTTGAGTCAGACCTAGTAAAGATGGCCCAGCTATATTGTTTGGAGAGCTACCTACTCCCCCGGCAAGAGAAGCCGCGGAAGCTGTGGAATAGGAAT
GAGGGGTTTGTGTATGCCATCCTAGCATGGGCATACGAGGTAATCCCGACCCTTAGCGCCCCGCCAACCAACTATGCACGGAAGATACGGAACACAGTCCCCCGCTTGAT
TAATTGGGAATCAGACACACAACTTGAATGGAGGGAACTGCATGCCAAAATCTTCCAATCCCCATCGCTGGAAGTCGTGCCGTTGGAACCAACAGATGTGGAAATGCGGA
TGCCGTACTTCCAACCATTCGTAGAGGATGAGATGACAGCACGTAGATTAGCCGGCGGCGGGGGACACCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATCCGATAAAAATGTATCGAAGCGATCGAGCCAAAGGTTAAAAGCGGCTGGAGTGACGCCCGGAAAGAAACACCCCCCACAGACATCCCCCATCACGTTGGACAG
CGCCCAAGAGTCCGAGGGTGAGGAAGCCGAAATGAGCACTGTCGATTCGGAGGAAAACGACACAAGCGATGGCACGGACGGAGACCATTCAGAAAACGACGATTTTACCA
CGAGCGATAGTGGAGACGAGGAACCGAGCAAGAAAAACCGAAGAGTAGACAGAAAGGGTTCGAAGGCCGACAAACGAAAGGGCAAGAGGGAACAAAAAGATGAAATTGAG
GAGGTTGAGCACACCAGAGCGGACGATGACTACTTCATGCCGCTCTCGAAACGCAGCAAAGCTCTGAAAATTAATCTCTGCACCAAAGCCGACATTATGGACCACATCCG
CCGGACATTGGGTGATAAATACAAGCTGCAGGAGTGTTCAAGATTTAAGGCCGAGTATTTTGATGAAGGCAAGGGAGTAAAAAGGAAGACTCTCAACATCATATTCAAAG
CAATAAAGCACGGTGTTGAGTCAGACCTAGTAAAGATGGCCCAGCTATATTGTTTGGAGAGCTACCTACTCCCCCGGCAAGAGAAGCCGCGGAAGCTGTGGAATAGGAAT
GAGGGGTTTGTGTATGCCATCCTAGCATGGGCATACGAGGTAATCCCGACCCTTAGCGCCCCGCCAACCAACTATGCACGGAAGATACGGAACACAGTCCCCCGCTTGAT
TAATTGGGAATCAGACACACAACTTGAATGGAGGGAACTGCATGCCAAAATCTTCCAATCCCCATCGCTGGAAGTCGTGCCGTTGGAACCAACAGATGTGGAAATGCGGA
TGCCGTACTTCCAACCATTCGTAGAGGATGAGATGACAGCACGTAGATTAGCCGGCGGCGGGGGACACCTGTAG
Protein sequenceShow/hide protein sequence
MTSDKNVSKRSSQRLKAAGVTPGKKHPPQTSPITLDSAQESEGEEAEMSTVDSEENDTSDGTDGDHSENDDFTTSDSGDEEPSKKNRRVDRKGSKADKRKGKREQKDEIE
EVEHTRADDDYFMPLSKRSKALKINLCTKADIMDHIRRTLGDKYKLQECSRFKAEYFDEGKGVKRKTLNIIFKAIKHGVESDLVKMAQLYCLESYLLPRQEKPRKLWNRN
EGFVYAILAWAYEVIPTLSAPPTNYARKIRNTVPRLINWESDTQLEWRELHAKIFQSPSLEVVPLEPTDVEMRMPYFQPFVEDEMTARRLAGGGGHL