; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016763 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016763
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase Topors
Genome locationchr12:40995536..40997211
RNA-Seq ExpressionLag0016763
SyntenyLag0016763
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593954.1 E3 ubiquitin-protein ligase Topors, partial [Cucurbita argyrosperma subsp. sororia]1.5e-12184.47Show/hide
Query:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA
        M  S REPARKL GENFV KVISPAICGETCPICL+ELEDRTA VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKI LSSRSFRKERLP LNCA
Subjt:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA

Query:  DKLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK
        D L+IG+GSSRT+AR      RNELSRDRRSERPLTWRRSFGRRG ESVP +VIA RKLQWRASIYDRRIQ  PSSVRSCL +N++GS G  EAILERIK
Subjt:  DKLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        PWIQREL+AIL DPDPTIIVHLVTSLF ARLE PSSQL+AE+DFLSPLR FLYEKTD F HELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

XP_022930345.1 E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita moschata]2.5e-12184.79Show/hide
Query:  KPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCAD
        K S  EPARKLNGENFV KVISPAICGETCPICL+ELEDR A VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKI LSSRSFRKERLP LNCAD
Subjt:  KPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCAD

Query:  KLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKP
         L+IG+GSSRT+AR      RNELSRDRRSERPLTWRRSFGRRG ESVP +VIA RKLQWRASIYDRRIQ VPSSVRSCL +N++GS G  EAILERIKP
Subjt:  KLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKP

Query:  WIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        WIQREL+AIL DPDPTIIVHLVTSLF ARLE PSSQL+AE+DFLSPLR FLYEKTD F HELR
Subjt:  WIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

XP_022999966.1 E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita maxima]1.7e-12284.85Show/hide
Query:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA
        MK S  EPARKLNGENFV KVISPAICG+TCPICL+ELEDRTA VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWF KINLSSRSFRKERLP LNCA
Subjt:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA

Query:  DKLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK
        D L+IG+GSSRT+AR      RNELSRDRRSERPLTWRRSFGRRG ESVP +VIA RKLQWRASIYDRRIQ VPSSVRSCL +N++GS G  EAILERIK
Subjt:  DKLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        PWIQREL+AIL DPDPTIIVHLVTSLF ARLE PSSQL+AE+DFLSPLR FLYEKTD F HELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

XP_038875512.1 E3 ubiquitin-protein ligase Topors isoform X1 [Benincasa hispida]5.6e-12183.71Show/hide
Query:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA
        MKPS REPA KLNGENF+SKVISPAICGETCPICL EL+DRTA VLTTCIHAYC+GCIRKWSNLKRTCPLCNAQFDSWF+KINLSSRSFR ERL TLNC 
Subjt:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA

Query:  DKLEIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK
        DKL+IGVGSSRT+ARG     RNEL+R+RRSER LTWRRSFGRRG ESVPA+V+A R+LQWRASIY+R IQ +PSSVRSCLELNI GSRG+ EAILERIK
Subjt:  DKLEIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        PWI+RELQAILEDPDPTIIVHLV SLF ARLE PS QL+AEDDFLSPLR FL+EKTD F HELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

XP_038875513.1 E3 ubiquitin-protein ligase Topors isoform X2 [Benincasa hispida]5.6e-12183.71Show/hide
Query:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA
        MKPS REPA KLNGENF+SKVISPAICGETCPICL EL+DRTA VLTTCIHAYC+GCIRKWSNLKRTCPLCNAQFDSWF+KINLSSRSFR ERL TLNC 
Subjt:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA

Query:  DKLEIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK
        DKL+IGVGSSRT+ARG     RNEL+R+RRSER LTWRRSFGRRG ESVPA+V+A R+LQWRASIY+R IQ +PSSVRSCLELNI GSRG+ EAILERIK
Subjt:  DKLEIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        PWI+RELQAILEDPDPTIIVHLV SLF ARLE PS QL+AEDDFLSPLR FL+EKTD F HELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

TrEMBL top hitse value%identityAlignment
A0A0A0KCD1 RING-type domain-containing protein1.5e-11677.94Show/hide
Query:  SIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCADKL
        S REPARKLNGENF++KVISPAICGETCPICL+ELEDRTA VLTTCIHAYC+ CIRKWSNLKRTCPLCNAQFDSWF+KINLSS+SFRKERL T NC+DKL
Subjt:  SIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCADKL

Query:  EIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKPWI
        ++GVGSS+ +ARG     R EL+R+RRSER LTWRRSFGRRG +S+PA+V+ +RK QWRASIY+R IQ VPSSVRSCLELN+ GSRG  E ILERIKPWI
Subjt:  EIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKPWI

Query:  QRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELRFLEYLSSGSPL
        QRELQ ILEDPDPTIIVHLV SLF AR+E  SSQL+AEDDFLSPLR FL+EKTD F HELR      +GSPL
Subjt:  QRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELRFLEYLSSGSPL

A0A1S3C7X8 E3 ubiquitin-protein ligase Topors1.3e-11878.7Show/hide
Query:  MKP--SIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLN
        MKP  S REPARKLNGENF++KVISPAICGETCPICL+ELEDRTA VLTTCIHAYC+GCIRKWSNLKRTCPLCNAQFDSWF+KINLSS+SFRKERL T N
Subjt:  MKP--SIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLN

Query:  CADKLEIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILER
        C++KL++GVGSS+T+ARG     R EL+R+RRSER LTWRRSFGRRG +S+PA+V+ +RKLQWRASIY+R IQ VPSSVRSCLELNI G+RG  E ILER
Subjt:  CADKLEIGVGSSRTNARG-----RNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILER

Query:  IKPWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELRFLEYLSSGSPL
        IKPWIQRELQ ILEDPDPTIIVHLV SLF ARLE  SSQL+AEDDFLSPLR FL+EKTD F HELR      +GSPL
Subjt:  IKPWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELRFLEYLSSGSPL

A0A6J1CAG7 E3 ubiquitin-protein ligase Topors3.5e-11379.55Show/hide
Query:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA
        MKP+ REP RKLN ENFVSKVISPAICGETCPICL+EL+D T  VLT+CIHAYCV CIRKWS LKRTCPLCNAQF+SWFSKIN SS SFRKE LPTLNC 
Subjt:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA

Query:  DKLEIGVGSSRTNA-----RGRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK
        DKL  GVGSSR ++     R RNEL+R RRSE PLTWRRSFGRRGSE VPA+VIAQRKLQWRASIY+R IQ VPSSVR   ELNISGS G+ EAILE+IK
Subjt:  DKLEIGVGSSRTNA-----RGRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        PWIQRELQAILEDPDPTIIVHLVTSLF +RLE PSSQL+ EDDFL  L  FLYEKTD F HELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

A0A6J1EQ79 E3 ubiquitin-protein ligase Topors isoform X11.2e-12184.79Show/hide
Query:  KPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCAD
        K S  EPARKLNGENFV KVISPAICGETCPICL+ELEDR A VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKI LSSRSFRKERLP LNCAD
Subjt:  KPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCAD

Query:  KLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKP
         L+IG+GSSRT+AR      RNELSRDRRSERPLTWRRSFGRRG ESVP +VIA RKLQWRASIYDRRIQ VPSSVRSCL +N++GS G  EAILERIKP
Subjt:  KLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKP

Query:  WIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        WIQREL+AIL DPDPTIIVHLVTSLF ARLE PSSQL+AE+DFLSPLR FLYEKTD F HELR
Subjt:  WIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

A0A6J1KEK6 E3 ubiquitin-protein ligase Topors isoform X18.4e-12384.85Show/hide
Query:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA
        MK S  EPARKLNGENFV KVISPAICG+TCPICL+ELEDRTA VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWF KINLSSRSFRKERLP LNCA
Subjt:  MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCA

Query:  DKLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK
        D L+IG+GSSRT+AR      RNELSRDRRSERPLTWRRSFGRRG ESVP +VIA RKLQWRASIYDRRIQ VPSSVRSCL +N++GS G  EAILERIK
Subjt:  DKLEIGVGSSRTNAR-----GRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR
        PWIQREL+AIL DPDPTIIVHLVTSLF ARLE PSSQL+AE+DFLSPLR FLYEKTD F HELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELR

SwissProt top hitse value%identityAlignment
P08393 E3 ubiquitin-protein ligase ICP01.4e-0536.17Show/hide
Query:  GETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQ
        G+ C +C  E+          C+H +C+ C++ W  L+ TCPLCNA+
Subjt:  GETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQ

P28284 E3 ubiquitin-protein ligase ICP01.5e-0435.56Show/hide
Query:  GETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCN
        G+ C +C  E+          C+H +C+ C++ W  L+ TCPLCN
Subjt:  GETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCN

Q5BIY5 RING finger protein 1452.6e-0438.78Show/hide
Query:  ETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDS
        + C IC    +D  + V+T C H +  GC++KW  ++ TCPLC+ Q  S
Subjt:  ETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDS

Q6NKR1 RING-H2 finger protein ATL282.0e-0440Show/hide
Query:  GETCPICLKELEDRTAV-VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFD
        G  C ICL E  D   V ++T C H +   CI  W  L +TCP+C  + D
Subjt:  GETCPICLKELEDRTAV-VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFD

Q7XTV7 Probable E3 ubiquitin-protein ligase HIP12.6e-0433.82Show/hide
Query:  SIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLC
        S  E  + L    F S  +  ++  E C IC +E  D   +    C H + VGC+R+W  +K TCP+C
Subjt:  SIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLC

Arabidopsis top hitse value%identityAlignment
AT1G18770.1 RING/U-box superfamily protein2.4e-0534.85Show/hide
Query:  PARKLNGENFVSKV--ISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLC
        PA KL  ++   K+  ++ +  GE C ICL+E  +   VV   C H +   C+ KW     +CPLC
Subjt:  PARKLNGENFVSKV--ISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLC

AT1G72220.1 RING/U-box superfamily protein9.2e-0543.18Show/hide
Query:  CPICLKEL-EDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNA
        CP+CL E  ED +  +L  C HA+ + CI  W +    CPLC A
Subjt:  CPICLKEL-EDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNA

AT2G35420.1 RING/U-box superfamily protein1.4e-0540Show/hide
Query:  GETCPICLKELEDRTAV-VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFD
        G  C ICL E  D   V ++T C H +   CI  W  L +TCP+C  + D
Subjt:  GETCPICLKELEDRTAV-VLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFD

AT2G39100.1 RING/U-box superfamily protein2.7e-5747.43Show/hide
Query:  FVSKVISPAICGETCPICLKEL-EDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCADKLEIGVGS----SR
        F  + I PA+ G++CPICL+ L E R+A V+T C H YC+ CIRKWS+ KR CPLCN +FDSWF   + +SR + KE+LP L   + L     +     R
Subjt:  FVSKVISPAICGETCPICLKEL-EDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCADKLEIGVGS----SR

Query:  TNARGRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKPWIQRELQAILEDPDP
           R R+ L       RPL WRRSFGR G  SVP +VI QRKLQWRASIY ++++ V    R  LEL+++ +  +   I ERI+PWI+RELQA+L DPDP
Subjt:  TNARGRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKPWIQRELQAILEDPDP

Query:  TIIVHLVTSLFEARLETPSSQLDAE-----DDFLSPLRTFLYEKTDFFLHELR
        ++IVH  ++LF  RLE  +++   +     +D +S LR FL +K D F HELR
Subjt:  TIIVHLVTSLFEARLETPSSQLDAE-----DDFLSPLRTFLYEKTDFFLHELR

AT5G12310.1 RING/U-box superfamily protein1.1e-0541.18Show/hide
Query:  GETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKR--TCPLCNAQFD
        G  C ICL  +  +   ++  C HAYCV CI +W++ K   TCP C   FD
Subjt:  GETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKR--TCPLCNAQFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTTCGATCCGGGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCGTATCGAAGGTAATTTCGCCGGCAATCTGTGGAGAAACCTGCCCAATTTGCCTCAAAGA
ATTGGAGGATCGTACCGCCGTTGTGCTTACAACGTGTATCCACGCCTATTGCGTTGGGTGTATTCGCAAATGGAGCAATTTGAAGCGAACTTGCCCTCTCTGCAACGCTC
AATTCGATTCATGGTTCTCCAAAATCAACCTCTCATCGCGAAGCTTCCGCAAAGAACGATTGCCAACCTTGAATTGTGCCGATAAGCTCGAGATTGGAGTCGGATCATCC
CGGACCAACGCTCGCGGGAGGAATGAATTAAGTAGAGATAGACGGTCGGAAAGACCACTGACATGGCGGCGATCATTCGGACGGCGAGGGTCGGAATCTGTACCTGCTAA
TGTTATTGCCCAACGAAAACTTCAATGGAGAGCAAGTATATACGACCGACGTATACAAACTGTCCCATCTTCGGTCAGATCATGTTTGGAACTGAACATATCAGGAAGTC
GTGGATCCAACGAAGCAATTCTAGAGAGAATCAAACCGTGGATTCAAAGAGAGTTGCAGGCCATCCTTGAGGATCCAGATCCAACAATAATTGTTCATTTGGTTACCTCA
CTATTTGAGGCAAGACTTGAAACTCCTTCCTCACAGCTTGATGCTGAAGATGACTTTCTTTCGCCTTTGCGTACCTTCCTCTATGAAAAGACTGATTTTTTTTTGCATGA
ATTAAGATTTCTTGAGTATCTGAGTTCTGGTAGTCCACTCACAGAAGTAGAAGTATTAAGGGTGTTGTTCACTACTAGATCAGTAATAATACCCAGAGAATTGGCATCCA
GGGATTGCGAGAGCATTGATATCTGCCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTTCGATCCGGGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCGTATCGAAGGTAATTTCGCCGGCAATCTGTGGAGAAACCTGCCCAATTTGCCTCAAAGA
ATTGGAGGATCGTACCGCCGTTGTGCTTACAACGTGTATCCACGCCTATTGCGTTGGGTGTATTCGCAAATGGAGCAATTTGAAGCGAACTTGCCCTCTCTGCAACGCTC
AATTCGATTCATGGTTCTCCAAAATCAACCTCTCATCGCGAAGCTTCCGCAAAGAACGATTGCCAACCTTGAATTGTGCCGATAAGCTCGAGATTGGAGTCGGATCATCC
CGGACCAACGCTCGCGGGAGGAATGAATTAAGTAGAGATAGACGGTCGGAAAGACCACTGACATGGCGGCGATCATTCGGACGGCGAGGGTCGGAATCTGTACCTGCTAA
TGTTATTGCCCAACGAAAACTTCAATGGAGAGCAAGTATATACGACCGACGTATACAAACTGTCCCATCTTCGGTCAGATCATGTTTGGAACTGAACATATCAGGAAGTC
GTGGATCCAACGAAGCAATTCTAGAGAGAATCAAACCGTGGATTCAAAGAGAGTTGCAGGCCATCCTTGAGGATCCAGATCCAACAATAATTGTTCATTTGGTTACCTCA
CTATTTGAGGCAAGACTTGAAACTCCTTCCTCACAGCTTGATGCTGAAGATGACTTTCTTTCGCCTTTGCGTACCTTCCTCTATGAAAAGACTGATTTTTTTTTGCATGA
ATTAAGATTTCTTGAGTATCTGAGTTCTGGTAGTCCACTCACAGAAGTAGAAGTATTAAGGGTGTTGTTCACTACTAGATCAGTAATAATACCCAGAGAATTGGCATCCA
GGGATTGCGAGAGCATTGATATCTGCCCCTAA
Protein sequenceShow/hide protein sequence
MKPSIREPARKLNGENFVSKVISPAICGETCPICLKELEDRTAVVLTTCIHAYCVGCIRKWSNLKRTCPLCNAQFDSWFSKINLSSRSFRKERLPTLNCADKLEIGVGSS
RTNARGRNELSRDRRSERPLTWRRSFGRRGSESVPANVIAQRKLQWRASIYDRRIQTVPSSVRSCLELNISGSRGSNEAILERIKPWIQRELQAILEDPDPTIIVHLVTS
LFEARLETPSSQLDAEDDFLSPLRTFLYEKTDFFLHELRFLEYLSSGSPLTEVEVLRVLFTTRSVIIPRELASRDCESIDICP