; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:41446031..41448495
RNA-Seq ExpressionLag0016807
SyntenyLag0016807
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-5748.58Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL +L+ F P L+DATSLLT I+ DAD++F+    S+IASH S   +ATLQ+S R F  YSVDH +S ++SL++ H A+ +G  FSSM+I V E+  +M
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRHR---LRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR
        ILR++        L   L L P Q E  G+  + KFFT+NS+  R+I++ +P + +  + +  T ++VKF I +  I   KE G C IVGYEG  ET+  
Subjt:  ILRFQLSRHR---LRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR

Query:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYFP
        IT  PM+FFL  +Y+ANR+WFYKTT+S+S I VPAFG+Y QYV+YFP
Subjt:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYFP

XP_022958857.1 uncharacterized protein LOC111460011 [Cucurbita moschata]1.6e-6655.28Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL RL  F P L++ATS+L  I+N+ADLKFS++KFS+I S+ S   +AT Q+SHRFFA Y VD  HS R+SLQ+ + A++ G  FSSMTI   ET SRM
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR
        +L+F+ S H   ++ +VL L PSQEE+ G+  HD+FF+I S+DFR+I+ G+P +PN SI +++T S+VKF   +   I  KE GRC IVGYEG  E  ++
Subjt:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR

Query:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF
        I L+P  FF  LSY A R+WFYKT DSR  IF+PAFGL AQYVIYF
Subjt:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]1.1e-6756.1Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL RL  F P L +ATSLL  I+N+ADLKFS++KFS+I S+ S   +AT Q+SHRFFA YSVD  HS R+SLQ+ + A+++G  FSSMTI   ET SRM
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR
        +L+F+ S H   ++ +VL L PSQEE+ G+  HD+FF+I S+DFR+I+ G+P +PN SI +++T S+VKF   +   I  KE GRC I+GYEG  E  ++
Subjt:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR

Query:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF
        I L+P  FF  LSY A R+WFYKT DSR  IFVPAFGL AQYVIYF
Subjt:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF

XP_023548334.1 uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo]1.8e-6756.1Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL RL  F P L++ATS+L  I+++ADLKFS++KFS+I S+ SL  +AT Q+SHRFFA Y VD  HS R+SLQ+ + A++ G  FSSMTI   ET SRM
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR
        +L+F+ S H   ++ +VL L PSQEE+ G+  HD+FF+I S+DFR+IV G+P +PN SI +++T SQVKF   +   I  KE GRC IVGYEG  E  ++
Subjt:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR

Query:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF
        I L+P  FF  LSY A R+WFYKT DSR  IF+PAFGL AQYVIYF
Subjt:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]2.7e-5046.34Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL RL++F P    ATS L  IA +AD+KF+   FSI  S++    +A L +++  F  Y VD+ H+ RISL++ H A+ +G    SMTI +   +++M
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRH--RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYRI
        ILRF+ S H  ++R  L+L PSQEED G+  + KFF+I+S+  R ++R +P +   SIC+T T SQVKF I +  I+  KE   C IVGYEG  ET+  I
Subjt:  ILRFQLSRH--RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYRI

Query:  TLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYFP
         L+PMLFFL  ++   R+WFYKTT    A+ VP+FG Y+QYVI FP
Subjt:  TLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYFP

TrEMBL top hitse value%identityAlignment
A0A1S3CL88 uncharacterized protein LOC1035022501.8e-4746.67Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIAND-ADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSR
        MFL +L++F P L+DATS L  I+ D ADLKF+ +KF IIASHRS   IATLQ+S ++F  +SVD+ HS ++SL++ H A+ +G  F+SMTI + +  ++
Subjt:  MFLFRLESFHPALVDATSLLTHIAND-ADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSR

Query:  MILRFQLSRHRLRQV---LTLLPSQEEDFGKTIHD----KFFTINSRDFREIVRGVPPYPNYS-ICITVTDSQVKFFIGALAIIFRKEEGR-CTIVGYEG
        MILRF      ++ +   LTL P Q ED     H+    K+F + S+  R I++ +P + N S I + VT+S+VKF I +  II    EGR C I G+E 
Subjt:  MILRFQLSRHRLRQV---LTLLPSQEEDFGKTIHD----KFFTINSRDFREIVRGVPPYPNYS-ICITVTDSQVKFFIGALAIIFRKEEGR-CTIVGYEG

Query:  GVETQYRITLHPMLFFLKLSYRANRLWFYKT-TDSRSAIFVPAFGLYAQYVIYFP
         VETQ++I L PM+FFL  +Y+ANR+WFYKT  ++ + + VPA+G++ QYVIYFP
Subjt:  GVETQYRITLHPMLFFLKLSYRANRLWFYKT-TDSRSAIFVPAFGLYAQYVIYFP

A0A6J1DM64 uncharacterized protein LOC1110222791.2e-4846.15Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MF  RL      L +ATS+L  ++N AD  FS   FSII  + S    ATLQ+S  FF+ YSVD     R+ + +   A+ EG  F SMT+  Q   + M
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRHR--LRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYRI
        ILRF+   +   L++ LTL  SQ +D G    +KFF+I+S DFR I+R +  Y +  I  T+TDSQV+F+I    I+  KE G C I GY+G  E Q+++
Subjt:  ILRFQLSRHR--LRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYRI

Query:  TLHPMLFFLKLSYRANRLWFYKTTDSRSAIF-VPAFGLYAQYVIYFP
        +L PMLFF+ LSY++ R+WF KTT+SRS +  VPAF  YAQYVIYFP
Subjt:  TLHPMLFFLKLSYRANRLWFYKTTDSRSAIF-VPAFGLYAQYVIYFP

A0A6J1H2Z8 uncharacterized protein LOC1114600117.6e-6755.28Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL RL  F P L++ATS+L  I+N+ADLKFS++KFS+I S+ S   +AT Q+SHRFFA Y VD  HS R+SLQ+ + A++ G  FSSMTI   ET SRM
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR
        +L+F+ S H   ++ +VL L PSQEE+ G+  HD+FF+I S+DFR+I+ G+P +PN SI +++T S+VKF   +   I  KE GRC IVGYEG  E  ++
Subjt:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR

Query:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF
        I L+P  FF  LSY A R+WFYKT DSR  IF+PAFGL AQYVIYF
Subjt:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF

A0A6J1KIW5 uncharacterized protein LOC1114948749.3e-4942.91Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL RL++F P LVD TS L  IA ++D+ F+     +  S  S   IATLQ+ H+ F  YSV+  H  RISL++LH A+ +    S+MTI + E  + M
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRH--RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYRI
        +LRF+   H  +LR    LLP QE+   +  + K   ++SRD R++++ +P +   S+C+TVT S+V+F I +  +IF+KE+GRC I+G++G   T++RI
Subjt:  ILRFQLSRH--RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYRI

Query:  TLHPMLFFLKLSYRANRLWFYKT-TDSRSAIFVPAFGLYAQYVIYFP
         L+PMLFFL L+Y    +WF+KT T++   +  P F ++AQYVIYFP
Subjt:  TLHPMLFFLKLSYRANRLWFYKT-TDSRSAIFVPAFGLYAQYVIYFP

A0A6J1KZ05 uncharacterized protein LOC1114988875.2e-6856.1Show/hide
Query:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM
        MFL RL  F P L +ATSLL  I+N+ADLKFS++KFS+I S+ S   +AT Q+SHRFFA YSVD  HS R+SLQ+ + A+++G  FSSMTI   ET SRM
Subjt:  MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRM

Query:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR
        +L+F+ S H   ++ +VL L PSQEE+ G+  HD+FF+I S+DFR+I+ G+P +PN SI +++T S+VKF   +   I  KE GRC I+GYEG  E  ++
Subjt:  ILRFQLSRH---RLRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYR

Query:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF
        I L+P  FF  LSY A R+WFYKT DSR  IFVPAFGL AQYVIYF
Subjt:  ITLHPMLFFLKLSYRANRLWFYKTTDSRSAIFVPAFGLYAQYVIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGTTCAGGCTTGAAAGCTTTCATCCAGCTCTTGTAGATGCAACCTCCCTTCTTACTCATATTGCCAATGATGCCGACCTGAAATTCTCGACGACGAAGTTCTC
GATAATCGCGTCGCATCGTTCCCTTCCCGTCATTGCAACGCTGCAGGTTTCGCATCGATTCTTCGCCGAGTATTCCGTCGATCACAAACATAGTTGGAGAATCTCCCTCC
AAACCCTCCATGCTGCCGTATTCGAAGGCACATGTTTTTCTTCAATGACCATCCAAGTTCAAGAAACCCTAAGCCGCATGATCCTTAGATTTCAACTTTCAAGGCATCGA
TTGCGTCAAGTATTGACATTGTTGCCTTCACAAGAGGAAGATTTTGGCAAAACTATACATGACAAATTCTTCACGATCAATTCACGTGATTTTAGAGAGATCGTGAGAGG
AGTACCTCCCTACCCAAATTATTCAATTTGTATTACTGTAACGGATTCACAAGTCAAGTTCTTTATTGGAGCTTTGGCGATTATTTTTCGTAAAGAGGAGGGACGATGCA
CCATTGTAGGCTATGAAGGAGGAGTTGAAACCCAATACCGAATCACTCTCCATCCTATGTTATTTTTCCTTAAATTGAGTTATCGAGCAAATAGGCTATGGTTTTATAAG
ACAACTGATTCTCGTAGTGCAATCTTTGTCCCAGCCTTTGGATTGTATGCTCAATATGTGATCTATTTTCCATTAAGGTCCCTACGTTTCAAAATCGGACAATCAAGTCC
CTACTGTTTCGGAAATGTTTCTATTGAGTCCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGTTCAGGCTTGAAAGCTTTCATCCAGCTCTTGTAGATGCAACCTCCCTTCTTACTCATATTGCCAATGATGCCGACCTGAAATTCTCGACGACGAAGTTCTC
GATAATCGCGTCGCATCGTTCCCTTCCCGTCATTGCAACGCTGCAGGTTTCGCATCGATTCTTCGCCGAGTATTCCGTCGATCACAAACATAGTTGGAGAATCTCCCTCC
AAACCCTCCATGCTGCCGTATTCGAAGGCACATGTTTTTCTTCAATGACCATCCAAGTTCAAGAAACCCTAAGCCGCATGATCCTTAGATTTCAACTTTCAAGGCATCGA
TTGCGTCAAGTATTGACATTGTTGCCTTCACAAGAGGAAGATTTTGGCAAAACTATACATGACAAATTCTTCACGATCAATTCACGTGATTTTAGAGAGATCGTGAGAGG
AGTACCTCCCTACCCAAATTATTCAATTTGTATTACTGTAACGGATTCACAAGTCAAGTTCTTTATTGGAGCTTTGGCGATTATTTTTCGTAAAGAGGAGGGACGATGCA
CCATTGTAGGCTATGAAGGAGGAGTTGAAACCCAATACCGAATCACTCTCCATCCTATGTTATTTTTCCTTAAATTGAGTTATCGAGCAAATAGGCTATGGTTTTATAAG
ACAACTGATTCTCGTAGTGCAATCTTTGTCCCAGCCTTTGGATTGTATGCTCAATATGTGATCTATTTTCCATTAAGGTCCCTACGTTTCAAAATCGGACAATCAAGTCC
CTACTGTTTCGGAAATGTTTCTATTGAGTCCCTCTAG
Protein sequenceShow/hide protein sequence
MFLFRLESFHPALVDATSLLTHIANDADLKFSTTKFSIIASHRSLPVIATLQVSHRFFAEYSVDHKHSWRISLQTLHAAVFEGTCFSSMTIQVQETLSRMILRFQLSRHR
LRQVLTLLPSQEEDFGKTIHDKFFTINSRDFREIVRGVPPYPNYSICITVTDSQVKFFIGALAIIFRKEEGRCTIVGYEGGVETQYRITLHPMLFFLKLSYRANRLWFYK
TTDSRSAIFVPAFGLYAQYVIYFPLRSLRFKIGQSSPYCFGNVSIESL