; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016808 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016808
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:41461829..41464030
RNA-Seq ExpressionLag0016808
SyntenyLag0016808
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]5.4e-11635.49Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        M CI+T TFSVL  G P G I+P RGL+QG PLS YLFL+  EG S L+  A  RG+L GV  +  +PSV+HLLFADDS++F KA   + + ++ L  TY
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV
        E ++G+ IN++KSA+    S N  R  F  +  +LNV  V+   +YLG+P+   + + + F  + +K+ K + GW+  L S AGKEILIK+V QAIP+Y 
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV

Query:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP
        +S F+ PK L                                              FNQAL+AKQ WRIL  P SLV+R+ R +Y PS   LEA++G +P
Subjt:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP

Query:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH
        SF+W+SL WG+ELL++G+R RVG+G SI  + D W+P  S F+ +    +     V D  T SG WN  LL +     ++D I +IP+  L   D  +WH
Subjt:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH

Query:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKV------WDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS
        Y++ G Y+VKSGYRL     +E+   S  P  +V      W  +W LK+P+K+KFF W+    FLP    L  R +     CP C    ES+ H ++ C 
Subjt:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKV------WDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS

Query:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANE----RRNRSSS-----
         AKE+WR +   ++ E    + F + W AL    S +E  L A  CW +W  +N+ I + K          + K   EF  AN        R SS     
Subjt:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANE----RRNRSSS-----

Query:  -FWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKS
          W+         S  G+ V+ R+  G  + AC + +++S+     EL A I+G+ FA+ +  +  ++E D     N +    E     G L++ +    
Subjt:  -FWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKS

Query:  LSGEEIAFSFVPRDCNNSVADAIAKKA
         +   +   + PR C N VA  +A+ A
Subjt:  LSGEEIAFSFVPRDCNNSVADAIAKKA

PRQ55763.1 putative RNA-directed DNA polymerase [Rosa chinensis]6.0e-11534.42Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        M C+TT ++S ++NG P+G ++PSRGL+QGD +S YLFL+ AE LS LI +A   G++ GV     +P +SHL FADDS +F KA   E   +K +   Y
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS
        E  SG+ INF+KS + F K++   ++  L++ L V +V     YLG+P+ +S SKS+ F F+  K+RK  QGWR    S AGKEI+IK+V Q+IP+YV+S
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS

Query:  IFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSF
         F+ PK L                                              FNQAL+AKQ WRI+  PNSL++RL + KYFP+   ++A+     S+
Subjt:  IFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSF

Query:  LWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFI--TESGAWNESLLIEAVGIDDIDIIRRIPIDLRKS-DSFMWH
         WKS+L+GRELL +G+R +VGNG  IA + D W+P    FRP+       + L  D +   E   W+  LL E     ++++I  IP+ LR+  D ++WH
Subjt:  LWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFI--TESGAWNESLLIEAVGIDDIDIIRRIPIDLRKS-DSFMWH

Query:  YDKYGKYTVKSGYRL--FMKNIIERASSSSNPM---GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSK
        +DK G Y VKSGY +   +    ERAS S+ P+   GK W +VW  ++P KV+ F W+ L+G LPT+  L  +       C  C  A E   H    CS 
Subjt:  YDKYGKYTVKSGYRL--FMKNIIERASSSSNPM---GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSK

Query:  AKEIWRLTFCH----DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANERRNRSS----SFW
            W L        D++      W ++    + ++++     L  V  W IW ++NN + +  +      +QW  K+L E+ + +  R + S    + W
Subjt:  AKEIWRLTFCH----DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANERRNRSS----SFW

Query:  --------KINVDAAW--DASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLV
                KIN+D ++  ++   GI V+ RDD+GS + A  +   +       E +A   G+  A+  E  + ++E+DC      LNQ+ E  +E+G ++
Subjt:  --------KINVDAAW--DASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLV

Query:  DNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKAK
        D+ +    S   I  S V R+  N VA+ +A  A+
Subjt:  DNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKAK

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]8.3e-11735.69Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        M CI+T TFS+L  G P G I+P RGL+QG PLS YLFL+  EG S L+  A  RG+L GV  +   PSV+HLLFADDS++F KA       ++ L  TY
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV
        E +SG+ IN++KSA  F  S N  R  F  +  +LNV  V+    YLG+P+   + + + F  + +K+ K + GW+  L S AGKEIL+K+V QAIP+Y 
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV

Query:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP
        +S F+ PK L                                              FNQAL+AKQ WRIL  P SLV+R+ R +Y PS   LEA++G +P
Subjt:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP

Query:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH
        SF+W+SL WG+ELL++G+R RVGNG SI  + D W+P  S F+ +    +    LV D  T SG WN  LL +     ++D   +IP+  L   D  +WH
Subjt:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH

Query:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPM------GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS
        Y++ G Y+VKSGYRL     +E+   S  P        K W  +W LK+P+K+KFF W+    FLP    L  R +     CP C    ES+ H ++ C 
Subjt:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPM------GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS

Query:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANER----RNRSSS-----
         AKE+WR +   ++ E    + F + W AL    S +E  L A  CW +W  +N+ I + K          + K   EF  AN        R SS     
Subjt:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANER----RNRSSS-----

Query:  ---------FWKINVDAAWDA--SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIG
                  +KINVD A  +  S  G+ V+ R+  G  + AC + + +S+     EL A I+G+ FA+ +  +  ++E D     N +    E     G
Subjt:  ---------FWKINVDAAWDA--SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIG

Query:  TLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKA
         L++ +     +   +   + PR   N VA  +A+ A
Subjt:  TLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKA

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.8e-11934.65Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        MSCITT  FSVLING P G I P RGL+QG PLS YLF+L AE  S L+++A     + G L      +++HLLFADDSLVF KA+ ++  ++K +   Y
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS
           SG+  NF KS++ F    + ++   + SI  +  V     YLG+P  L R+K   F  V  K+   +  W   LFS  GKEILIK+V QA+P+Y +S
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS

Query:  IFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSF
        +FK PK L                                              FNQALVAKQ WR++ +PNSL++R+++ +Y+ + +   A++G +PSF
Subjt:  IFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSF

Query:  LWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPIDL-RKSDSFMWHYD
        +W+S+LWG +++ +G+R R+G+G+ +  ++D WIPR + F+P+    +  + +VAD I     W    L +    +DI+ I +I +   ++ D  +WH+D
Subjt:  LWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPIDL-RKSDSFMWHYD

Query:  KYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRL
        K G+Y+VKSGY+L +         SSN   ++W I W L +P KVK F W+AL+  LPT  NL  R       C  C + VE++ H L  C  A++IW L
Subjt:  KYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRL

Query:  TFCHDLLERDFNHWFEDRWIALCEILSRD---ELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANERRN----------------RS
                +D N   +D + A+ E+ SR    E  L+ V CW IW  +N  I + K       +      L  + R ++  N                 S
Subjt:  TFCHDLLERDFNHWFEDRWIALCEILSRD---ELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANERRN----------------RS

Query:  SSFWKINVDAAWDA--SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIR
         +  K+NVDAA        G+  I RD  G IL    +         +AE +AI  G++ A  +  S L+VE+DC +   LLN       EI  ++ ++R
Subjt:  SSFWKINVDAAWDA--SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIR

Query:  RKSLSGEEIAFSFVPRDCNNSVADAIAKKAKRD
        R+S   +++ FSF+PR C N+ A A+AK A R+
Subjt:  RKSLSGEEIAFSFVPRDCNNSVADAIAKKAKRD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.2e-12537.94Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        + CI+T  FS+ +NG P G   PSRG++QGDPLS YLFLL AEGLS LI+  N  G L+G+    ++ S++HLLFADDSL+F ++ ESE + ++ LL +Y
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS
           SG+CINF+KSA+LF  +++ +R+ +L  ILNV  V   G+YLG+PS  +R + +                R+  +   G+    K  G         
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS

Query:  IFKFPKSLGFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCL
           F    GFNQALVAK VWR L  PN LVS++L+ KYF   S+L+A      S+ WK  LWGR+LL +G+R RVGNG +I  F DPW+PR + F+PL  
Subjt:  IFKFPKSLGFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCL

Query:  NLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDIVWQLKVPSKV
        N       VA FIT  G W+ + +  +   +D D+I  +PI      DS++WHYDK G Y+V+SGY+L+M       S+S+N  G  W+ +W+L VP+K+
Subjt:  NLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDIVWQLKVPSKV

Query:  KFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCH-DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGD
        K F W++    +PT  NL +RG+     C +C    ESI H  F C +A++IWR  F     L  + N  F + W +L E L   +L L A+T W IW D
Subjt:  KFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCH-DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGD

Query:  KNNHIHDIKIPPPGIRSQWILKYLDEFDRA-----------NER------RNRSSSFWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPM
        +N+ IH  ++ P   + +W+  +LD   +A           N R      R  SS   K+N DAA   +ST    I RD   S++ A    +     P +
Subjt:  KNNHIHDIKIPPPGIRSQWILKYLDEFDRA-----------NER------RNRSSSFWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPM

Query:  AELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAK
        AE++ I++G++FA +   + L VE+D L A  L+  +     +    V  I+  +     I+FS   R CN + A  +AK
Subjt:  AELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAK

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein2.6e-11635.49Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        M CI+T TFSVL  G P G I+P RGL+QG PLS YLFL+  EG S L+  A  RG+L GV  +  +PSV+HLLFADDS++F KA   + + ++ L  TY
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV
        E ++G+ IN++KSA+    S N  R  F  +  +LNV  V+   +YLG+P+   + + + F  + +K+ K + GW+  L S AGKEILIK+V QAIP+Y 
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV

Query:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP
        +S F+ PK L                                              FNQAL+AKQ WRIL  P SLV+R+ R +Y PS   LEA++G +P
Subjt:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP

Query:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH
        SF+W+SL WG+ELL++G+R RVG+G SI  + D W+P  S F+ +    +     V D  T SG WN  LL +     ++D I +IP+  L   D  +WH
Subjt:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH

Query:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKV------WDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS
        Y++ G Y+VKSGYRL     +E+   S  P  +V      W  +W LK+P+K+KFF W+    FLP    L  R +     CP C    ES+ H ++ C 
Subjt:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKV------WDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS

Query:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANE----RRNRSSS-----
         AKE+WR +   ++ E    + F + W AL    S +E  L A  CW +W  +N+ I + K          + K   EF  AN        R SS     
Subjt:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANE----RRNRSSS-----

Query:  -FWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKS
          W+         S  G+ V+ R+  G  + AC + +++S+     EL A I+G+ FA+ +  +  ++E D     N +    E     G L++ +    
Subjt:  -FWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKS

Query:  LSGEEIAFSFVPRDCNNSVADAIAKKA
         +   +   + PR C N VA  +A+ A
Subjt:  LSGEEIAFSFVPRDCNNSVADAIAKKA

A0A2P6SAP1 Putative RNA-directed DNA polymerase2.9e-11534.42Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        M C+TT ++S ++NG P+G ++PSRGL+QGD +S YLFL+ AE LS LI +A   G++ GV     +P +SHL FADDS +F KA   E   +K +   Y
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS
        E  SG+ INF+KS + F K++   ++  L++ L V +V     YLG+P+ +S SKS+ F F+  K+RK  QGWR    S AGKEI+IK+V Q+IP+YV+S
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS

Query:  IFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSF
         F+ PK L                                              FNQAL+AKQ WRI+  PNSL++RL + KYFP+   ++A+     S+
Subjt:  IFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSF

Query:  LWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFI--TESGAWNESLLIEAVGIDDIDIIRRIPIDLRKS-DSFMWH
         WKS+L+GRELL +G+R +VGNG  IA + D W+P    FRP+       + L  D +   E   W+  LL E     ++++I  IP+ LR+  D ++WH
Subjt:  LWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFI--TESGAWNESLLIEAVGIDDIDIIRRIPIDLRKS-DSFMWH

Query:  YDKYGKYTVKSGYRL--FMKNIIERASSSSNPM---GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSK
        +DK G Y VKSGY +   +    ERAS S+ P+   GK W +VW  ++P KV+ F W+ L+G LPT+  L  +       C  C  A E   H    CS 
Subjt:  YDKYGKYTVKSGYRL--FMKNIIERASSSSNPM---GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSK

Query:  AKEIWRLTFCH----DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANERRNRSS----SFW
            W L        D++      W ++    + ++++     L  V  W IW ++NN + +  +      +QW  K+L E+ + +  R + S    + W
Subjt:  AKEIWRLTFCH----DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANERRNRSS----SFW

Query:  --------KINVDAAW--DASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLV
                KIN+D ++  ++   GI V+ RDD+GS + A  +   +       E +A   G+  A+  E  + ++E+DC      LNQ+ E  +E+G ++
Subjt:  --------KINVDAAW--DASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLV

Query:  DNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKAK
        D+ +    S   I  S V R+  N VA+ +A  A+
Subjt:  DNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKAK

A0A5E4FZN9 PREDICTED: retrotransposon4.0e-11735.69Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        M CI+T TFS+L  G P G I+P RGL+QG PLS YLFL+  EG S L+  A  RG+L GV  +   PSV+HLLFADDS++F KA       ++ L  TY
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV
        E +SG+ IN++KSA  F  S N  R  F  +  +LNV  V+    YLG+P+   + + + F  + +K+ K + GW+  L S AGKEIL+K+V QAIP+Y 
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV

Query:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP
        +S F+ PK L                                              FNQAL+AKQ WRIL  P SLV+R+ R +Y PS   LEA++G +P
Subjt:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP

Query:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH
        SF+W+SL WG+ELL++G+R RVGNG SI  + D W+P  S F+ +    +    LV D  T SG WN  LL +     ++D   +IP+  L   D  +WH
Subjt:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH

Query:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPM------GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS
        Y++ G Y+VKSGYRL     +E+   S  P        K W  +W LK+P+K+KFF W+    FLP    L  R +     CP C    ES+ H ++ C 
Subjt:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPM------GKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS

Query:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANER----RNRSSS-----
         AKE+WR +   ++ E    + F + W AL    S +E  L A  CW +W  +N+ I + K          + K   EF  AN        R SS     
Subjt:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANER----RNRSSS-----

Query:  ---------FWKINVDAAWDA--SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIG
                  +KINVD A  +  S  G+ V+ R+  G  + AC + + +S+     EL A I+G+ FA+ +  +  ++E D     N +    E     G
Subjt:  ---------FWKINVDAAWDA--SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIG

Query:  TLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKA
         L++ +     +   +   + PR   N VA  +A+ A
Subjt:  TLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAKKA

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-12537.94Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        + CI+T  FS+ +NG P G   PSRG++QGDPLS YLFLL AEGLS LI+  N  G L+G+    ++ S++HLLFADDSL+F ++ ESE + ++ LL +Y
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS
           SG+CINF+KSA+LF  +++ +R+ +L  ILNV  V   G+YLG+PS  +R + +                R+  +   G+    K  G         
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLS

Query:  IFKFPKSLGFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCL
           F    GFNQALVAK VWR L  PN LVS++L+ KYF   S+L+A      S+ WK  LWGR+LL +G+R RVGNG +I  F DPW+PR + F+PL  
Subjt:  IFKFPKSLGFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCL

Query:  NLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDIVWQLKVPSKV
        N       VA FIT  G W+ + +  +   +D D+I  +PI      DS++WHYDK G Y+V+SGY+L+M       S+S+N  G  W+ +W+L VP+K+
Subjt:  NLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDIVWQLKVPSKV

Query:  KFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCH-DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGD
        K F W++    +PT  NL +RG+     C +C    ESI H  F C +A++IWR  F     L  + N  F + W +L E L   +L L A+T W IW D
Subjt:  KFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCH-DLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGD

Query:  KNNHIHDIKIPPPGIRSQWILKYLDEFDRA-----------NER------RNRSSSFWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPM
        +N+ IH  ++ P   + +W+  +LD   +A           N R      R  SS   K+N DAA   +ST    I RD   S++ A    +     P +
Subjt:  KNNHIHDIKIPPPGIRSQWILKYLDEFDRA-----------NER------RNRSSSFWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPM

Query:  AELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAK
        AE++ I++G++FA +   + L VE+D L A  L+  +     +    V  I+  +     I+FS   R CN + A  +AK
Subjt:  AELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAK

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)2.6e-11635.49Show/hide
Query:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY
        M CI+T TFSVL  G P G I+P RGL+QG PLS YLFL+  EG S L+  A  RG+L GV  +  +PSV+HLLFADDS++F KA   + + ++ L  TY
Subjt:  MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTY

Query:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV
        E ++G+ IN++KSA+    S N  R  F  +  +LNV  V+   +YLG+P+   + + + F  + +K+ K + GW+  L S AGKEILIK+V QAIP+Y 
Subjt:  EAISGECINFNKSAILFPKSMNVDRKGF--LSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYV

Query:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP
        +S F+ PK L                                              FNQAL+AKQ WRIL  P SLV+R+ R +Y PS   LEA++G +P
Subjt:  LSIFKFPKSL---------------------------------------------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSP

Query:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH
        SF+W+SL WG+ELL++G+R RVG+G SI  + D W+P  S F+ +    +     V D  T SG WN  LL +     ++D I +IP+  L   D  +WH
Subjt:  SFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPI-DLRKSDSFMWH

Query:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKV------WDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS
        Y++ G Y+VKSGYRL     +E+   S  P  +V      W  +W LK+P+K+KFF W+    FLP    L  R +     CP C    ES+ H ++ C 
Subjt:  YDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKV------WDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCS

Query:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANE----RRNRSSS-----
         AKE+WR +   ++ E    + F + W AL    S +E  L A  CW +W  +N+ I + K          + K   EF  AN        R SS     
Subjt:  KAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANE----RRNRSSS-----

Query:  -FWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKS
          W+         S  G+ V+ R+  G  + AC + +++S+     EL A I+G+ FA+ +  +  ++E D     N +    E     G L++ +    
Subjt:  -FWKINVDAAWDASSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKS

Query:  LSGEEIAFSFVPRDCNNSVADAIAKKA
         +   +   + PR C N VA  +A+ A
Subjt:  LSGEEIAFSFVPRDCNNSVADAIAKKA

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657507.5e-2023.14Show/hide
Query:  VPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLSIFKFPKSL--------------------------------------
        +P    R     F  +L ++   M GWR    S AG+  L K+V  ++P + +S    P+S+                                      
Subjt:  VPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLSIFKFPKSL--------------------------------------

Query:  -------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQL---GYSPSFLWKSLLWG-RELLSQGIRRRVGNGESIACFQDPWIPRKSLF--
                 N+AL++K  WR+L   NSL + +L+ KY   G I +++      S S  W+S+  G R+++S G+    G+G+ I  + D W+  K L   
Subjt:  -------GFNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQL---GYSPSFLWKSLLWG-RELLSQGIRRRVGNGESIACFQDPWIPRKSLF--

Query:  ----RPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPIDL--RKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDI
            RP   + V ++    D       W+ + +      +    +R + +DL     D   W + + G+++V+S Y +   + + R +     M   ++ 
Subjt:  ----RPLCLNLVFSQALVADFITESGAWNESLLIEAVGIDDIDIIRRIPIDL--RKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDI

Query:  VWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIW
        +W+++VP +VK F W      + T    H R +     C +C   VES+ H L  C     IW
Subjt:  VWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIW

P92555 Uncharacterized mitochondrial protein AtMg012501.1e-1355.88Show/hide
Query:  LINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDS
        +ING P+G + PSRGL+QGDPLS YLF+L  E LS L   A  +G L G+  S +SP ++HLLFADD+
Subjt:  LINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDS

P93295 Uncharacterized mitochondrial protein AtMg003109.2e-1847.19Show/hide
Query:  FNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPL
        FNQAL+AKQ +RI+  P++L+SRLLR +YFP  S++E  +G  PS+ W+S++ GRELLS+G+ R +G+G     + D WI  ++   PL
Subjt:  FNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPL

Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.2e-0832.31Show/hide
Query:  VWQLKVPSKVKFFCWKALRGFLPTRVNL----HIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCHDL-LERDFNHWFE-DRWIALCEILSRD
        VW      K  F  W +    LPTR  L    HI+  D    C +C++  ES DH LFSC  A ++WRL F      +R F  W E   W+      +  
Subjt:  VWQLKVPSKVKFFCWKALRGFLPTRVNL----HIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCHDL-LERDFNHWFE-DRWIALCEILSRD

Query:  ELRLIA--VTCWAIWGDKNNHIH-DIKIPP
         LR ++     + IW  +NN +H +++I P
Subjt:  ELRLIA--VTCWAIWGDKNNHIH-DIKIPP

AT3G09510.1 Ribonuclease H-like superfamily protein1.0e-3526.94Show/hide
Query:  LRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGA---WNESLLIEAVGI
        ++ +YF   SIL+A++    S+ W SLL G  LL +G R  +G+G++I    D  +      RPL     + +  + +     G+   W++S + + V  
Subjt:  LRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGA---WNESLLIEAVGI

Query:  DDIDIIRRIPI-DLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDI---VWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFT
         D   I RI +   +K D  +W+Y+  G+YTV+SGY L   +      + + P G + D+   +W L +  K+K F W+AL   L T   L  RGM I  
Subjt:  DDIDIIRRIPI-DLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDI---VWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFT

Query:  GCPMCSMAVESIDHCLFSCSKAKEIWRLT----FCHDLLERDFNHWFEDRWIALCEILSRDELRLIAV-TCWAIWGDKNNHIHDIKIPPPGIRSQWILKY
         CP C    ESI+H LF+C  A   WRL+      + L+  DF     +    + +    D  +L+ V   W IW  +NN + +     P   S+ +L  
Subjt:  GCPMCSMAVESIDHCLFSCSKAKEIWRLT----FCHDLLERDFNHWFEDRWIALCEILSRDELRLIAV-TCWAIWGDKNNHIHDIKIPPPGIRSQWILKY

Query:  LDE---------------------FDRANERRNRSSSFWKINVDAAWDA---SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSL
          E                      +   E RN  +++ K N DA +D     +TG  +I R+  G+ +      L  +  P  AE KA++  ++     
Subjt:  LDE---------------------FDRANERRNRSSSFWKINVDAAWDA---SSTGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSL

Query:  EGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAK
          +++ +E DC    NL+N  S   + +   +++I   +     I F F+ R   N +A  +AK
Subjt:  EGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIAK

AT4G29090.1 Ribonuclease H-like superfamily protein1.7e-4626.42Show/hide
Query:  LSIFKFPKSLG------FNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRK
        LS +K    +G      FN AL+ KQ+WR+L+ P SL++++ + +YF     L A LG  PSF+WKS+   +E+L QG R  VGNGE I  ++  W+  K
Subjt:  LSIFKFPKSLG------FNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRK

Query:  SLFRPLCLNLVFSQAL--------VADFITESG-AWNESLLIEAVGIDDIDIIRRI-PIDLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASS---S
             L +  V  Q          V+D I ESG  W + ++       +  +I  + P   R  DS+ W Y   G YTVKSGY +  + I +R+S    S
Subjt:  SLFRPLCLNLVFSQAL--------VADFITESG-AWNESLLIEAVGIDDIDIIRRI-PIDLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASS---S

Query:  SNPMGKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCHDLLERDFNHWFEDRWIALCEI
           +  ++  +W+ +   K++ F WK L   LP    L  R +   + C  C    E+++H LF C+ A+  W ++     L      W +  ++ L  +
Subjt:  SNPMGKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDHCLFSCSKAKEIWRLTFCHDLLERDFNHWFEDRWIALCEI

Query:  LS--------RDELRLIAVTCWAIWGDKNN--------HIHDIKIPPPGIRSQWILKYLDEFDRANERRNRSS---------SFWKINVDAAW--DASST
         +            +L+    W +W ++N         +  ++         +W ++   E      + NRSS          + K N DA W  D    
Subjt:  LS--------RDELRLIAVTCWAIWGDKNN--------HIHDIKIPPPGIRSQWILKYLDEFDRANERRNRSS---------SFWKINVDAAW--DASST

Query:  GIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCN
        GI  + R+++G +     ++L        AEL+A+   V      + + ++ E+D      +LN D EIW  +   + +++R      E+ F F+PR+  
Subjt:  GIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCN

Query:  NSVADAIAKKA
        N++A+ +A+++
Subjt:  NSVADAIAKKA

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.5e-1947.19Show/hide
Query:  FNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPL
        FNQAL+AKQ +RI+  P++L+SRLLR +YFP  S++E  +G  PS+ W+S++ GRELLS+G+ R +G+G     + D WI  ++   PL
Subjt:  FNQALVAKQVWRILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPL

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)7.5e-1555.88Show/hide
Query:  LINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDS
        +ING P+G + PSRGL+QGDPLS YLF+L  E LS L   A  +G L G+  S +SP ++HLLFADD+
Subjt:  LINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTATCACTACCCCTACCTTTTCTGTCCTGATAAACGGGATTCCTAAAGGAGAGATAATTCCTAGTAGGGGCTTGCAGCAAGGTGACCCCCTGTCGTCGTACCT
CTTCTTGCTTGTAGCAGAGGGCCTATCTTTTTTAATCTCCGAAGCTAATGCTAGAGGTAATTTGTCAGGGGTCCTTTGTTCCCCATCGAGCCCAAGTGTTTCCCATTTGC
TGTTTGCTGACGACAGCTTGGTCTTCTGCAAGGCCAATGAATCCGAGTTAGTTCATATGAAAGCCCTTTTGTCTACCTATGAAGCTATCTCAGGGGAATGCATAAACTTC
AATAAGTCTGCAATCTTATTTCCTAAAAGTATGAATGTGGATAGGAAAGGTTTCTTGAGCAGCATCCTTAATGTTAATCAGGTTAAAGATCTAGGGTCCTATCTGGGGGT
TCCTTCATCTTTGTCTAGGAGTAAGTCAAAGGACTTTGCTTTTGTTCTCAACAAAATCAGGAAGTCTATGCAAGGCTGGAGGAGATCTCTTTTCTCAATTGCGGGGAAAG
AGATTTTGATCAAAAGTGTTGGACAGGCCATCCCATCTTATGTTCTGAGTATTTTCAAGTTCCCTAAAAGCCTCGGCTTCAACCAAGCCCTTGTGGCTAAACAGGTCTGG
CGAATCCTTGCTTTTCCTAACTCTTTGGTTTCCAGGCTTTTGAGGGATAAATACTTCCCCTCGGGCTCTATTTTGGAGGCTCAATTGGGATACTCTCCTTCTTTTCTTTG
GAAAAGCCTTTTATGGGGTCGAGAGCTTTTAAGCCAAGGCATTCGCAGGAGGGTGGGCAATGGCGAATCCATTGCTTGTTTTCAGGATCCATGGATTCCAAGAAAGTCCT
TATTCAGGCCTTTGTGCTTGAATCTTGTTTTCTCCCAAGCGTTGGTAGCTGATTTTATCACAGAATCTGGAGCTTGGAACGAAAGTTTGCTAATTGAAGCTGTTGGTATT
GATGACATTGATATAATCAGGCGAATCCCTATAGATCTAAGGAAGTCTGATAGCTTTATGTGGCATTATGACAAATATGGAAAATACACAGTGAAGAGTGGTTACCGATT
GTTTATGAAGAACATAATTGAAAGGGCTTCCTCGAGCAGTAATCCTATGGGGAAAGTCTGGGACATCGTTTGGCAGCTCAAAGTTCCCTCGAAGGTCAAATTTTTCTGCT
GGAAAGCTCTGAGGGGTTTCCTTCCTACCAGAGTCAATCTACATATTCGAGGAATGGATATTTTTACTGGTTGCCCTATGTGTTCTATGGCTGTTGAATCTATTGATCAC
TGTTTATTTTCTTGTTCAAAAGCTAAAGAGATTTGGAGGCTTACCTTCTGCCATGATCTTCTGGAGAGGGACTTTAATCACTGGTTTGAAGATAGGTGGATCGCCCTTTG
TGAAATCCTTTCTAGAGATGAGCTCAGATTAATCGCAGTGACATGCTGGGCTATCTGGGGAGATAAAAATAACCATATTCATGATATAAAAATTCCCCCTCCTGGCATTC
GCAGTCAATGGATTTTGAAATACCTGGATGAATTTGATCGAGCTAATGAGAGACGGAATAGGTCTTCCTCGTTCTGGAAAATCAATGTTGATGCGGCCTGGGATGCCTCC
TCTACTGGTATCAGAGTGATTTGCCGAGATGATAGGGGAAGTATCTTGGGTGCTTGTTGTCAATCTCTGAATTCATCTTTCCCTCCTCCCATGGCAGAGCTGAAGGCTAT
CATAAAAGGGGTTGAGTTTGCATTGTCTTTGGAGGGAAGCAAACTGATGGTGGAGACGGATTGTCTTCAAGCCTTTAATCTGTTGAATCAAGACTCTGAAATCTGGAATG
AAATAGGAACTTTGGTTGATAATATTCGAAGAAAGTCTTTGTCTGGTGAAGAAATTGCTTTCTCATTTGTTCCTCGTGATTGTAATAATTCAGTGGCAGACGCTATTGCT
AAGAAAGCCAAGCGTGATAAGTGTATCTTCTTGGTCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTATCACTACCCCTACCTTTTCTGTCCTGATAAACGGGATTCCTAAAGGAGAGATAATTCCTAGTAGGGGCTTGCAGCAAGGTGACCCCCTGTCGTCGTACCT
CTTCTTGCTTGTAGCAGAGGGCCTATCTTTTTTAATCTCCGAAGCTAATGCTAGAGGTAATTTGTCAGGGGTCCTTTGTTCCCCATCGAGCCCAAGTGTTTCCCATTTGC
TGTTTGCTGACGACAGCTTGGTCTTCTGCAAGGCCAATGAATCCGAGTTAGTTCATATGAAAGCCCTTTTGTCTACCTATGAAGCTATCTCAGGGGAATGCATAAACTTC
AATAAGTCTGCAATCTTATTTCCTAAAAGTATGAATGTGGATAGGAAAGGTTTCTTGAGCAGCATCCTTAATGTTAATCAGGTTAAAGATCTAGGGTCCTATCTGGGGGT
TCCTTCATCTTTGTCTAGGAGTAAGTCAAAGGACTTTGCTTTTGTTCTCAACAAAATCAGGAAGTCTATGCAAGGCTGGAGGAGATCTCTTTTCTCAATTGCGGGGAAAG
AGATTTTGATCAAAAGTGTTGGACAGGCCATCCCATCTTATGTTCTGAGTATTTTCAAGTTCCCTAAAAGCCTCGGCTTCAACCAAGCCCTTGTGGCTAAACAGGTCTGG
CGAATCCTTGCTTTTCCTAACTCTTTGGTTTCCAGGCTTTTGAGGGATAAATACTTCCCCTCGGGCTCTATTTTGGAGGCTCAATTGGGATACTCTCCTTCTTTTCTTTG
GAAAAGCCTTTTATGGGGTCGAGAGCTTTTAAGCCAAGGCATTCGCAGGAGGGTGGGCAATGGCGAATCCATTGCTTGTTTTCAGGATCCATGGATTCCAAGAAAGTCCT
TATTCAGGCCTTTGTGCTTGAATCTTGTTTTCTCCCAAGCGTTGGTAGCTGATTTTATCACAGAATCTGGAGCTTGGAACGAAAGTTTGCTAATTGAAGCTGTTGGTATT
GATGACATTGATATAATCAGGCGAATCCCTATAGATCTAAGGAAGTCTGATAGCTTTATGTGGCATTATGACAAATATGGAAAATACACAGTGAAGAGTGGTTACCGATT
GTTTATGAAGAACATAATTGAAAGGGCTTCCTCGAGCAGTAATCCTATGGGGAAAGTCTGGGACATCGTTTGGCAGCTCAAAGTTCCCTCGAAGGTCAAATTTTTCTGCT
GGAAAGCTCTGAGGGGTTTCCTTCCTACCAGAGTCAATCTACATATTCGAGGAATGGATATTTTTACTGGTTGCCCTATGTGTTCTATGGCTGTTGAATCTATTGATCAC
TGTTTATTTTCTTGTTCAAAAGCTAAAGAGATTTGGAGGCTTACCTTCTGCCATGATCTTCTGGAGAGGGACTTTAATCACTGGTTTGAAGATAGGTGGATCGCCCTTTG
TGAAATCCTTTCTAGAGATGAGCTCAGATTAATCGCAGTGACATGCTGGGCTATCTGGGGAGATAAAAATAACCATATTCATGATATAAAAATTCCCCCTCCTGGCATTC
GCAGTCAATGGATTTTGAAATACCTGGATGAATTTGATCGAGCTAATGAGAGACGGAATAGGTCTTCCTCGTTCTGGAAAATCAATGTTGATGCGGCCTGGGATGCCTCC
TCTACTGGTATCAGAGTGATTTGCCGAGATGATAGGGGAAGTATCTTGGGTGCTTGTTGTCAATCTCTGAATTCATCTTTCCCTCCTCCCATGGCAGAGCTGAAGGCTAT
CATAAAAGGGGTTGAGTTTGCATTGTCTTTGGAGGGAAGCAAACTGATGGTGGAGACGGATTGTCTTCAAGCCTTTAATCTGTTGAATCAAGACTCTGAAATCTGGAATG
AAATAGGAACTTTGGTTGATAATATTCGAAGAAAGTCTTTGTCTGGTGAAGAAATTGCTTTCTCATTTGTTCCTCGTGATTGTAATAATTCAGTGGCAGACGCTATTGCT
AAGAAAGCCAAGCGTGATAAGTGTATCTTCTTGGTCGGTTGA
Protein sequenceShow/hide protein sequence
MSCITTPTFSVLINGIPKGEIIPSRGLQQGDPLSSYLFLLVAEGLSFLISEANARGNLSGVLCSPSSPSVSHLLFADDSLVFCKANESELVHMKALLSTYEAISGECINF
NKSAILFPKSMNVDRKGFLSSILNVNQVKDLGSYLGVPSSLSRSKSKDFAFVLNKIRKSMQGWRRSLFSIAGKEILIKSVGQAIPSYVLSIFKFPKSLGFNQALVAKQVW
RILAFPNSLVSRLLRDKYFPSGSILEAQLGYSPSFLWKSLLWGRELLSQGIRRRVGNGESIACFQDPWIPRKSLFRPLCLNLVFSQALVADFITESGAWNESLLIEAVGI
DDIDIIRRIPIDLRKSDSFMWHYDKYGKYTVKSGYRLFMKNIIERASSSSNPMGKVWDIVWQLKVPSKVKFFCWKALRGFLPTRVNLHIRGMDIFTGCPMCSMAVESIDH
CLFSCSKAKEIWRLTFCHDLLERDFNHWFEDRWIALCEILSRDELRLIAVTCWAIWGDKNNHIHDIKIPPPGIRSQWILKYLDEFDRANERRNRSSSFWKINVDAAWDAS
STGIRVICRDDRGSILGACCQSLNSSFPPPMAELKAIIKGVEFALSLEGSKLMVETDCLQAFNLLNQDSEIWNEIGTLVDNIRRKSLSGEEIAFSFVPRDCNNSVADAIA
KKAKRDKCIFLVG