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Lag0016818 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016818
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:41562351..41562785
RNA-Seq ExpressionLag0016818
SyntenyLag0016818
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]1.2e-0429.71Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL
        E  A+W K+I + +G+  N      +T  S + PW+ +    NL  +  V  VG+G    FWE+          + P L  + ++++ +  S    + LL
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL

Query:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK
         SW+   RR+LNE E  E A L  LL     F+S++ K
Subjt:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK

KAG7020776.1 hypothetical protein SDJN02_17464, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-0548.33Show/hide
Query:  MDLEVSYEKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITV
        MD   + EKDAIWRK+I  K+  SR N K G  +L SSK PWK + + K+L+Y +I  T+
Subjt:  MDLEVSYEKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITV

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]6.3e-0631.97Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSMEPLLT--
        E  ++W K+I +K+G+  N          SS+ PWK +     L        VGNG    FWE+  L+  P     P L  + +  + +  S     T  
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSMEPLLT--

Query:  -SWNLQLRRHLNEAESNEWASL
         SWN   RR+LNEAE  E A L
Subjt:  -SWNLQLRRHLNEAESNEWASL

XP_026453629.1 uncharacterized protein LOC113354505 [Papaver somniferum]4.1e-0530.77Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSP-----HCRSMEP
        E +A WR +I  K G S+       +      G W+ +    +  YK I+ T+G GN T FWE+  L   P     P+L  + ++++      + R  E 
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSP-----HCRSMEP

Query:  LLTSWNLQLRRHLNEAESNEWASLSHLLSS
          ++WNL LRR L++ E  E  +LSH L +
Subjt:  LLTSWNLQLRRHLNEAESNEWASLSHLLSS

XP_028122358.1 uncharacterized protein LOC114319532 [Camellia sinensis]5.4e-0529.71Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK----LYQAKNLI----YKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM
        EKDA+WRKII +K+ +  N+  P           WK    + + +N +      N+ I VG+GN T FW++            P+L  +   +    RS+
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK----LYQAKNLI----YKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM

Query:  EPLLT---SWNLQLRRHLNEAESNEWASLSHLLSSFSS
                +WN Q RR L + E  E + L+ LL+S S+
Subjt:  EPLLT---SWNLQLRRHLNEAESNEWASLSHLLSSFSS

TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 25.8e-0529.71Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL
        E  A+W K+I + +G+  N      +T  S + PW+ +    NL  +  V  VG+G    FWE+          + P L  + ++++ +  S    + LL
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL

Query:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK
         SW+   RR+LNE E  E A L  LL     F+S++ K
Subjt:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK

A0A540M4H0 zf-RVT domain-containing protein3.1e-0631.97Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSMEPLLT--
        E  ++W K+I +K+G+  N          SS+ PWK +     L        VGNG    FWE+  L+  P     P L  + +  + +  S     T  
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSMEPLLT--

Query:  -SWNLQLRRHLNEAESNEWASL
         SWN   RR+LNEAE  E A L
Subjt:  -SWNLQLRRHLNEAESNEWASL

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)5.8e-0529.71Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL
        E  A+W K+I + +G+  N      +T  S + PW+ +    NL  +  V  VG+G    FWE+          + P L  + ++++ +  S    + LL
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL

Query:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK
         SW+   RR+LNE E  E A L  LL     F+S++ K
Subjt:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK

A0A5H2XKI7 VIRB2-interacting protein 25.8e-0529.71Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL
        E  A+W K+I + +G+  N      +T  S + PW+ +    NL  +  V  VG+G    FWE+          + P L  + ++++ +  S    + LL
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL

Query:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK
         SW+   RR+LNE E  E A L  LL     F+S++ K
Subjt:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK

A0A5H2Y6K0 VIRB2-interacting protein 25.8e-0529.71Show/hide
Query:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL
        E  A+W K+I + +G+  N      +T  S + PW+ +    NL  +  V  VG+G    FWE+          + P L  + ++++ +  S    + LL
Subjt:  EKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWK-LYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSM---EPLL

Query:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK
         SW+   RR+LNE E  E A L  LL     F+S++ K
Subjt:  TSWNLQLRRHLNEAESNEWASLSHLLSS---FSSKMRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGAGGTTTCATATGAAAAAGATGCTATTTGGAGGAAGATTATTGTTGCAAAATTTGGGGTCTCCAGGAACAACCTTAAACCAGGGAAATCTACCTTGTATTC
CTCAAAGGGTCCATGGAAGCTATATCAAGCTAAAAACCTGATTTACAAAAACATTGTTATTACAGTGGGCAATGGAAACACTACTCTGTTCTGGGAGGAGTTTGGCTTGG
ATCCTCAACCTTCGGACTCAATTTCCCCATCTTTATCACCTATCCCTAAAGAAAGAAGCCCACATTGCAGATCTATGGAACCCCTCCTCACAAGCTGGAACCTACAGCTT
AGAAGACATTTGAATGAAGCTGAATCGAATGAATGGGCTAGTTTATCCCACCTTCTATCCTCCTTCTCATCAAAGATGAGGAAGACAAATGGCTTGGTCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGGAGGTTTCATATGAAAAAGATGCTATTTGGAGGAAGATTATTGTTGCAAAATTTGGGGTCTCCAGGAACAACCTTAAACCAGGGAAATCTACCTTGTATTC
CTCAAAGGGTCCATGGAAGCTATATCAAGCTAAAAACCTGATTTACAAAAACATTGTTATTACAGTGGGCAATGGAAACACTACTCTGTTCTGGGAGGAGTTTGGCTTGG
ATCCTCAACCTTCGGACTCAATTTCCCCATCTTTATCACCTATCCCTAAAGAAAGAAGCCCACATTGCAGATCTATGGAACCCCTCCTCACAAGCTGGAACCTACAGCTT
AGAAGACATTTGAATGAAGCTGAATCGAATGAATGGGCTAGTTTATCCCACCTTCTATCCTCCTTCTCATCAAAGATGAGGAAGACAAATGGCTTGGTCCCTTGA
Protein sequenceShow/hide protein sequence
MDLEVSYEKDAIWRKIIVAKFGVSRNNLKPGKSTLYSSKGPWKLYQAKNLIYKNIVITVGNGNTTLFWEEFGLDPQPSDSISPSLSPIPKERSPHCRSMEPLLTSWNLQL
RRHLNEAESNEWASLSHLLSSFSSKMRKTNGLVP