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Lag0016852 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016852
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUbiquitin-like protein ATG12
Genome locationchr12:41864426..41866833
RNA-Seq ExpressionLag0016852
SyntenyLag0016852
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000422 - autophagy of mitochondrion (biological process)
GO:0006501 - C-terminal protein lipidation (biological process)
GO:0044804 - autophagy of nucleus (biological process)
GO:0034045 - phagophore assembly site membrane (cellular component)
GO:0034274 - Atg12-Atg5-Atg16 complex (cellular component)
InterPro domainsIPR007242 - Ubiquitin-like protein Atg12
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151012.1 ubiquitin-like protein ATG12 [Cucumis sativus]4.3e-4396.84Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESSSSA KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_008464001.1 PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]9.5e-4395.79Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESS+SA KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_022955552.1 ubiquitin-like protein ATG12 [Cucurbita moschata]9.5e-4395.79Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MASMESSSSA KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_022980759.1 ubiquitin-like protein ATG12 [Cucurbita maxima]4.7e-4293.68Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MASMESS+S+ KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_038878493.1 ubiquitin-like protein ATG12 [Benincasa hispida]1.5e-4397.89Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MAS ESSSSA KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

TrEMBL top hitse value%identityAlignment
A0A0A0LIA6 Ubiquitin-like protein ATG122.1e-4396.84Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESSSSA KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A1S3CKI1 Ubiquitin-like protein ATG124.6e-4395.79Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESS+SA KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A6J1DGR5 Ubiquitin-like protein ATG128.7e-4294.74Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MAS ESSSS  KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A6J1GTZ1 Ubiquitin-like protein ATG124.6e-4395.79Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MASMESSSSA KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A6J1J054 Ubiquitin-like protein ATG122.3e-4293.68Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MASMESS+S+ KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

SwissProt top hitse value%identityAlignment
A2YAG8 Ubiquitin-like protein ATG125.6e-3070.24Show/hide
Query:  KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE +IDLYNNFGIDG+LVVNYA SMAWG
Subjt:  KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q1SF86 Ubiquitin-like protein ATG122.4e-3676.84Show/hide
Query:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MA+ ES +S  KVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + R++LFV+VNSAFSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q69NP0 Ubiquitin-like protein ATG125.6e-3070.24Show/hide
Query:  KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE +IDLYNNFGIDG+LVVNYA SMAWG
Subjt:  KVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q8S924 Ubiquitin-like protein ATG12A2.6e-3577.08Show/hide
Query:  MASMESS-SSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MA+  SS SS  KVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  MASMESS-SSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q9LVK3 Ubiquitin-like protein ATG12B1.4e-3373.63Show/hide
Query:  ESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        ES +S  K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  ESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Arabidopsis top hitse value%identityAlignment
AT1G54210.1 Ubiquitin-like superfamily protein1.9e-3677.08Show/hide
Query:  MASMESS-SSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MA+  SS SS  KVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  MASMESS-SSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

AT1G54210.2 Ubiquitin-like superfamily protein4.3e-0943.75Show/hide
Query:  MASMESS-SSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MA+  SS SS  KVVV LRATG APILKQ+KFK                                            NFG DGKLVVNYACSMAWG
Subjt:  MASMESS-SSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

AT3G13970.1 Ubiquitin-like superfamily protein1.0e-3473.63Show/hide
Query:  ESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        ES +S  K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  ESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTATGGAGTCGTCTAGTTCTGCTCCAAAAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCTGGAACAGA
CAAATTTATTAAAGTTATTGATTACATACGTCGGTCAATTCAACGAGACACCTTGTTTGTGTTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATC
TATATAATAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTATGGAGTCGTCTAGTTCTGCTCCAAAAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCTGGAACAGA
CAAATTTATTAAAGTTATTGATTACATACGTCGGTCAATTCAACGAGACACCTTGTTTGTGTTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATC
TATATAATAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA
Protein sequenceShow/hide protein sequence
MASMESSSSAPKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG