; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016858 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016858
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamate--tRNA ligase
Genome locationchr12:41907232..41907588
RNA-Seq ExpressionLag0016858
SyntenyLag0016858
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058525.1 putative transmembrane protein [Cucumis melo var. makuwa]7.4e-3778.99Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSS RPLAIVLALASAV LSPLRS+ET  SSGF +PLVLLGLIIAIKTSS CSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VMFILVLSWKNSVQEFLWR
        +M IL LSW++SVQEFLWR
Subjt:  VMFILVLSWKNSVQEFLWR

KAE8637311.1 hypothetical protein CSA_023553, partial [Cucumis sativus]2.3e-3879.83Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSSQRPLAI LALASAVVLSPLRS+ET  SSGF +PLVLLGLI+AIKTSSSCSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VMFILVLSWKNSVQEFLWR
        +M IL LSW++SVQEFLWR
Subjt:  VMFILVLSWKNSVQEFLWR

KAF3958642.1 hypothetical protein CMV_016470 [Castanea mollissima]7.9e-3167.5Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R  ET+ SSGF LP+VL GLIIAIKT+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVMFILVLSWKNSVQEFLWR
        LVM +LVLSW+ SVQEF WR
Subjt:  LVMFILVLSWKNSVQEFLWR

KAG6581812.1 hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4383.9Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILV
        MDSNYG+YTNQ SSQRPLAIVLALASAVVLSPLR +E+R SSGF LPLVLL LIIAIKTSSSCSSMST+R ERDSA LSSDPSWVLKIGSSSWGLAG+L+
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILV

Query:  MFILVLSWKNSVQEFLWR
        M I  LSW++SV+EFLWR
Subjt:  MFILVLSWKNSVQEFLWR

XP_030969466.1 uncharacterized protein LOC115989757 [Quercus lobata]3.0e-3067.5Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R +ET+ SSGF LP+VL GLIIAIKT+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVMFILVLSWKNSVQEFLWR
        LVM +LVLSW+ SVQEF WR
Subjt:  LVMFILVLSWKNSVQEFLWR

TrEMBL top hitse value%identityAlignment
A0A0A0LEN3 Uncharacterized protein1.1e-3879.83Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSSQRPLAI LALASAVVLSPLRS+ET  SSGF +PLVLLGLI+AIKTSSSCSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VMFILVLSWKNSVQEFLWR
        +M IL LSW++SVQEFLWR
Subjt:  VMFILVLSWKNSVQEFLWR

A0A2N9IBH6 Uncharacterized protein1.5e-3065Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPLRS--------FETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT Q SSQR +A+VL+L SA+VLSPL +        +ET+ SSGF LP+VL+GLIIAI+T+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPLRS--------FETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVMFILVLSWKNSVQEFLWR
        LVM +LVLSW+ SVQEF WR
Subjt:  LVMFILVLSWKNSVQEFLWR

A0A5A7UY99 Putative transmembrane protein3.6e-3778.99Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSS RPLAIVLALASAV LSPLRS+ET  SSGF +PLVLLGLIIAIKTSS CSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VMFILVLSWKNSVQEFLWR
        +M IL LSW++SVQEFLWR
Subjt:  VMFILVLSWKNSVQEFLWR

A0A6N2MX54 Uncharacterized protein8.0e-2969.91Show/hide
Query:  NQNSSQRPLAIVLALASAVVLSPL----RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILVMFILV
        +QNSSQR LA+VLALASAVVLSPL    R+ ET+ SSGF LP+VL GL+IAI+T+S  SSMS  RG R S   S DPSWVL+IGSSSWGLAG+LVM  LV
Subjt:  NQNSSQRPLAIVLALASAVVLSPL----RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILVMFILV

Query:  LSWKNSVQEFLWR
        LSW++SVQEF WR
Subjt:  LSWKNSVQEFLWR

A0A7N2LMQ6 Uncharacterized protein1.5e-3067.5Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R +ET+ SSGF LP+VL GLIIAIKT+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVMFILVLSWKNSVQEFLWR
        LVM +LVLSW+ SVQEF WR
Subjt:  LVMFILVLSWKNSVQEFLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGACCACTTGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCGCCATTAAGATCCTTTGA
AACCAGATTGAGCTCTGGATTTGCTCTTCCTCTGGTTCTTTTGGGGCTTATAATTGCCATCAAGACATCTTCCTCTTGCTCATCTATGTCCACTGAGAGAGGGGAGAGAG
ATTCTGCAACTCTGTCTTCAGATCCTTCGTGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGATGTTTATTCTTGTGCTTTCTTGGAAAAAT
TCTGTTCAAGAATTCCTTTGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGACCACTTGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCGCCATTAAGATCCTTTGA
AACCAGATTGAGCTCTGGATTTGCTCTTCCTCTGGTTCTTTTGGGGCTTATAATTGCCATCAAGACATCTTCCTCTTGCTCATCTATGTCCACTGAGAGAGGGGAGAGAG
ATTCTGCAACTCTGTCTTCAGATCCTTCGTGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGATGTTTATTCTTGTGCTTTCTTGGAAAAAT
TCTGTTCAAGAATTCCTTTGGAGATAG
Protein sequenceShow/hide protein sequence
MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILVMFILVLSWKN
SVQEFLWR