; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016893 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016893
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description40S ribosomal protein SA
Genome locationchr12:42119614..42121011
RNA-Seq ExpressionLag0016893
SyntenyLag0016893
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606673.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1283.67Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YGAAPLVASDQWAGQISDAQWG  DVVPPPV AAAV PPV +VEWA E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
XP_004144441.1 40S ribosomal protein SA isoform X1 [Cucumis sativus]2.2e-1175.51Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YG APLVASDQWAGQISDAQWGA D++P P AA  V PPVSNVEW  E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
XP_022949415.1 40S ribosomal protein SA-like [Cucurbita moschata]7.6e-1283.67Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YGAAPLVASDQWAGQISDAQWG  DVVPPPV AAAV PPV +VEWA E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
XP_022998206.1 40S ribosomal protein SA-like [Cucurbita maxima]2.0e-1285.71Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YGAAPLVASDQWAGQISDAQWG  DVVPPPV AAAV PPVS+VEWA E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
XP_031738662.1 40S ribosomal protein SA isoform X2 [Cucumis sativus]2.2e-1175.51Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YG APLVASDQWAGQISDAQWGA D++P P AA  V PPVSNVEW  E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
TrEMBL top hitse value%identityAlignment
A0A0A0L946 40S ribosomal protein SA1.1e-1175.51Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YG APLVASDQWAGQISDAQWGA D++P P AA  V PPVSNVEW  E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
A0A6J1GCP6 40S ribosomal protein SA3.7e-1283.67Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YGAAPLVASDQWAGQISDAQWG  DVVPPPV AAAV PPV +VEWA E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
A0A6J1GVZ0 40S ribosomal protein SA2.4e-1179.59Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        ++GAAPLV SDQWAGQISDAQWGA DVVPPP  AA V PPVSNVEW+ E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
A0A6J1IX68 40S ribosomal protein SA2.4e-1179.59Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        ++GAAPLV SDQWAGQISDAQWGA DVVPPP  AA V PPVSNVEW+ E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
A0A6J1K9M4 40S ribosomal protein SA9.7e-1385.71Show/hide
Query:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
        +YGAAPLVASDQWAGQISDAQWG  DVVPPPV AAAV PPVS+VEWA E
Subjt:  NYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTATTTACTTGGAAAAGAATTATGGTGCTGCTCCGCTTGTTGCATCAGATCAATGGGCTGGACAAATTTCTGATGCTCAGTGGGGTGCCTCTGATGTGGTTCC
ACCACCTGTAGCAGCTGCTGCAGTTGCTCCACCTGTTTCGAATGTCGAGTGGGCCCCTGAGACAGGTAAAGTAAAAATGCATCGTCAGTCTCCTGAAACTGAAGAAAAAT
GTGTTCTTTCAAGGAATCAACATATGAATATTGAAGAAGTTCAATATGGAGTAGTGAAAGAGTATGAATGCTCCAATGATTCAGAAAGAGAAGTTGTAGAAGGCCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTATTTACTTGGAAAAGAATTATGGTGCTGCTCCGCTTGTTGCATCAGATCAATGGGCTGGACAAATTTCTGATGCTCAGTGGGGTGCCTCTGATGTGGTTCC
ACCACCTGTAGCAGCTGCTGCAGTTGCTCCACCTGTTTCGAATGTCGAGTGGGCCCCTGAGACAGGTAAAGTAAAAATGCATCGTCAGTCTCCTGAAACTGAAGAAAAAT
GTGTTCTTTCAAGGAATCAACATATGAATATTGAAGAAGTTCAATATGGAGTAGTGAAAGAGTATGAATGCTCCAATGATTCAGAAAGAGAAGTTGTAGAAGGCCGATAG
Protein sequenceShow/hide protein sequence
MKIIYLEKNYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAVAPPVSNVEWAPETGKVKMHRQSPETEEKCVLSRNQHMNIEEVQYGVVKEYECSNDSEREVVEGR