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Lag0016919 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016919
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAM32A
Genome locationchr12:42367569..42367886
RNA-Seq ExpressionLag0016919
SyntenyLag0016919
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068186.1 protein FAM32A [Cucumis melo var. makuwa]4.1e-3983.65Show/hide
Query:  MMFVNLPISLVVNVGGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPK
        MM   +   LVVNVGGSAASGE PS+ NEEEI++A KSTE+GKV HYDDHLTP ERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPK
Subjt:  MMFVNLPISLVVNVGGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPK

Query:  VGPG
        VGPG
Subjt:  VGPG
XP_004144416.1 protein FAM32A [Cucumis sativus]2.3e-3790Show/hide
Query:  GGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        GGSAASGE PS+ NEEEID+A KSTE+GKV HYDDHLTP ERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPKVGPG
Subjt:  GGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
XP_008465099.1 PREDICTED: protein FAM32A [Cucumis melo]8.6e-3788.89Show/hide
Query:  GGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        GGSAASGE PS+ NEEEI++A KSTE+GKV HYDDHLTP ERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPKVGPG
Subjt:  GGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
XP_022956102.1 protein FAM32A [Cucurbita moschata]1.2e-3587.91Show/hide
Query:  GGSAASGETPSEVN-EEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        GGSAASGE P + N EEEID+A KSTEDGKV HYDDHLTP E+RYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPKVGPG
Subjt:  GGSAASGETPSEVN-EEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
XP_022980751.1 protein FAM32A-like [Cucurbita maxima]1.2e-3587.91Show/hide
Query:  GGSAASGETPSEVNEE-EIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        GGSAASGE P + NEE EID+A KSTEDGKV HYDDHLTP E+RYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPKVGPG
Subjt:  GGSAASGETPSEVNEE-EIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
TrEMBL top hitse value%identityAlignment
A0A0A0LE92 Uncharacterized protein5.3e-4084.62Show/hide
Query:  MMFVNLPISLVVNVGGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPK
        MM   +   LVVNVGGSAASGE PS+ NEEEID+A KSTE+GKV HYDDHLTP ERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPK
Subjt:  MMFVNLPISLVVNVGGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPK

Query:  VGPG
        VGPG
Subjt:  VGPG
A0A1S3CN03 protein FAM32A4.2e-3788.89Show/hide
Query:  GGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        GGSAASGE PS+ NEEEI++A KSTE+GKV HYDDHLTP ERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPKVGPG
Subjt:  GGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
A0A5D3DC76 Protein FAM32A2.0e-3983.65Show/hide
Query:  MMFVNLPISLVVNVGGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPK
        MM   +   LVVNVGGSAASGE PS+ NEEEI++A KSTE+GKV HYDDHLTP ERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPK
Subjt:  MMFVNLPISLVVNVGGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPK

Query:  VGPG
        VGPG
Subjt:  VGPG
A0A6J1GVE6 protein FAM32A6.0e-3687.91Show/hide
Query:  GGSAASGETPSEVN-EEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        GGSAASGE P + N EEEID+A KSTEDGKV HYDDHLTP E+RYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPKVGPG
Subjt:  GGSAASGETPSEVN-EEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
A0A6J1IS50 protein FAM32A-like6.0e-3687.91Show/hide
Query:  GGSAASGETPSEVNEE-EIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        GGSAASGE P + NEE EID+A KSTEDGKV HYDDHLTP E+RYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMS+HYDIPKVGPG
Subjt:  GGSAASGETPSEVNEE-EIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
SwissProt top hitse value%identityAlignment
A6QR31 Protein FAM32A5.7e-0741.51Show/hide
Query:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
        D  TP +  + + +E+  + R+ KKA+K+H+ R++DFN++L  +++HYDIPKV
Subjt:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
B2RYG1 Protein FAM32A5.7e-0741.51Show/hide
Query:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
        D  TP +  + + +E+  + R+ KKA+K+H+ R++DFN++L  +++HYDIPKV
Subjt:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
Q5R9E5 Protein FAM32A5.7e-0741.51Show/hide
Query:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
        D  TP +  + + +E+  + R+ KKA+K+H+ R++DFN++L  +++HYDIPKV
Subjt:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
Q6GQN4 Protein FAM32A-like4.3e-0738.36Show/hide
Query:  EEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
        EE++  +E   E+G    Y D  TP +  + + +E+  + R+ KKA+K+H+ R++DFN++L  +++HYDIPKV
Subjt:  EEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
Q9Y421 Protein FAM32A5.7e-0741.51Show/hide
Query:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
        D  TP +  + + +E+  + R+ KKA+K+H+ R++DFN++L  +++HYDIPKV
Subjt:  DHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKV
Arabidopsis top hitse value%identityAlignment
AT1G16810.1 unknown protein3.3e-2669.51Show/hide
Query:  EVNEEEIDDAEKSTEDGKV---LHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        E  +EE++ +EK++ED K+   L  DDHLTP ERRYIEQK+R+DV +LAK+ANKSHR+RI+DFNQYLANMS+HYDIPKVGPG
Subjt:  EVNEEEIDDAEKSTEDGKV---LHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
AT1G16810.2 unknown protein3.3e-2669.51Show/hide
Query:  EVNEEEIDDAEKSTEDGKV---LHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG
        E  +EE++ +EK++ED K+   L  DDHLTP ERRYIEQK+R+DV +LAK+ANKSHR+RI+DFNQYLANMS+HYDIPKVGPG
Subjt:  EVNEEEIDDAEKSTEDGKV---LHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGTTTGTGAATCTACCTATCTCTTTGGTGGTAAATGTAGGTGGAAGTGCTGCAAGTGGTGAAACGCCAAGTGAAGTGAACGAGGAAGAAATAGATGACGCCGA
AAAGTCAACAGAGGATGGGAAGGTTCTTCATTATGATGATCATCTAACACCAGTGGAAAGACGTTATATTGAACAGAAGGAGAGAATTGATGTTCATAGACTAGCCAAGA
AGGCTAATAAATCTCATCGTGACCGTATCCAGGACTTTAATCAATATCTGGCAAACATGAGTGATCATTATGACATTCCCAAAGTTGGTCCAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGTTTGTGAATCTACCTATCTCTTTGGTGGTAAATGTAGGTGGAAGTGCTGCAAGTGGTGAAACGCCAAGTGAAGTGAACGAGGAAGAAATAGATGACGCCGA
AAAGTCAACAGAGGATGGGAAGGTTCTTCATTATGATGATCATCTAACACCAGTGGAAAGACGTTATATTGAACAGAAGGAGAGAATTGATGTTCATAGACTAGCCAAGA
AGGCTAATAAATCTCATCGTGACCGTATCCAGGACTTTAATCAATATCTGGCAAACATGAGTGATCATTATGACATTCCCAAAGTTGGTCCAGGCTGA
Protein sequenceShow/hide protein sequence
MMMFVNLPISLVVNVGGSAASGETPSEVNEEEIDDAEKSTEDGKVLHYDDHLTPVERRYIEQKERIDVHRLAKKANKSHRDRIQDFNQYLANMSDHYDIPKVGPG