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Lag0016927 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016927
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr12:42450813..42451322
RNA-Seq ExpressionLag0016927
SyntenyLag0016927
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057564.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]2.0e-2751.56Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        MR F + I E +LLE+PL+NGKFTWS+ G   S SL+DRF ++  WD  F ++R SR+ R  SDH P+  EAG F+WGPSPFRF NSWL    C QII +
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SLSQDSSYGWAGFVIAYQCPLSSLEQSL
        SL+  +   W GFVI     L SL+ +L
Subjt:  SLSQDSSYGWAGFVIAYQCPLSSLEQSL

KAA0063413.1 hypothetical protein E6C27_scaffold508G00500 [Cucumis melo var. makuwa]8.5e-2657.8Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        MR FN  ID+  LLE+PL+NG FTWS  G   + SLIDRFFISK WD  FENSR +RQ    SDHFPL  EAG+  WGPSPFRF NSW     CV +I +
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SLSQDSSYG
        S  Q +  G
Subjt:  SLSQDSSYG

TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]2.0e-2754.78Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        MR FN  ID L + ELPL NG+ TWS+ G   S SL+D FFI K WD I ENSR  R+  ++SDHFPL  EAG+ +WGPSPFRF NSWL   +C +II  
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SLSQDSSYGWAGFVI
          +  S   WAGFV+
Subjt:  SLSQDSSYGWAGFVI

TYK03825.1 exodeoxyribonuclease-like [Cucumis melo var. makuwa]1.2e-2452.94Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        M +FNK+I+ + L+E+P+ NG++TW + G  SS SL +RFFI+K WD +F+NSR S + R  S+H PL  +AG   WGPSPFRF NSWL   DC Q+IA 
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SL
        +L
Subjt:  SL

XP_038904301.1 uncharacterized protein LOC120090656 [Benincasa hispida]6.9e-2853.15Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        M  FNK I    LLE PL+NG+FTWS+ GD +S SL+D F +S +W+ +F+NSR +RQ R++SDHFPL  EAG F+WGPS FRF NSWLN  +  ++I  
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SLSQDSSYGWA
        SL +  ++ WA
Subjt:  SLSQDSSYGWA

TrEMBL top hitse value%identityAlignment
A0A5A7UR38 Transposon TX1 uncharacterized9.8e-2851.56Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        MR F + I E +LLE+PL+NGKFTWS+ G   S SL+DRF ++  WD  F ++R SR+ R  SDH P+  EAG F+WGPSPFRF NSWL    C QII +
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SLSQDSSYGWAGFVIAYQCPLSSLEQSL
        SL+  +   W GFVI     L SL+ +L
Subjt:  SLSQDSSYGWAGFVIAYQCPLSSLEQSL

A0A5D3BHE3 Uncharacterized protein9.8e-2854.78Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        MR FN  ID L + ELPL NG+ TWS+ G   S SL+D FFI K WD I ENSR  R+  ++SDHFPL  EAG+ +WGPSPFRF NSWL   +C +II  
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SLSQDSSYGWAGFVI
          +  S   WAGFV+
Subjt:  SLSQDSSYGWAGFVI

A0A5D3BXH7 Exodeoxyribonuclease-like5.9e-2552.94Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        M +FNK+I+ + L+E+P+ NG++TW + G  SS SL +RFFI+K WD +F+NSR S + R  S+H PL  +AG   WGPSPFRF NSWL   DC Q+IA 
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SL
        +L
Subjt:  SL

A0A5D3CIL8 Uncharacterized protein4.1e-2657.8Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS
        MR FN  ID+  LLE+PL+NG FTWS  G   + SLIDRFFISK WD  FENSR +RQ    SDHFPL  EAG+  WGPSPFRF NSW     CV +I +
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIAS

Query:  SLSQDSSYG
        S  Q +  G
Subjt:  SLSQDSSYG

A0A6J1DMQ9 uncharacterized protein LOC1110219835.0e-2459.55Show/hide
Query:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWL
        MR FN +I EL+L E+PL+NGKFTWS+ G+DS  SL+D+F +SK WD +F NSR SR  R  SDHFP+  + G+  WGPS FRF+NSWL
Subjt:  MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATCTTTAATAAGGTGATTGATGAGCTTGAACTCCTGGAGTTACCCTTAGCCAATGGAAAATTCACATGGTCCAAATCGGGTGATGATTCTTCACCATCTCTAAT
TGACAGATTTTTTATTTCGAAAAGTTGGGATCTGATTTTTGAGAACTCAAGAACTTCTAGACAGGTTCGATCACTCTCAGATCATTTTCCTCTGCCTTTTGAAGCTGGAA
ATTTTCAGTGGGGTCCTTCACCTTTTCGGTTTTACAATTCTTGGTTGAACCAGTTTGATTGTGTGCAAATTATTGCTTCATCACTATCACAAGATTCTTCTTATGGGTGG
GCAGGTTTTGTTATTGCTTATCAGTGTCCTTTATCTTCTCTTGAGCAAAGCCTTCTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGATCTTTAATAAGGTGATTGATGAGCTTGAACTCCTGGAGTTACCCTTAGCCAATGGAAAATTCACATGGTCCAAATCGGGTGATGATTCTTCACCATCTCTAAT
TGACAGATTTTTTATTTCGAAAAGTTGGGATCTGATTTTTGAGAACTCAAGAACTTCTAGACAGGTTCGATCACTCTCAGATCATTTTCCTCTGCCTTTTGAAGCTGGAA
ATTTTCAGTGGGGTCCTTCACCTTTTCGGTTTTACAATTCTTGGTTGAACCAGTTTGATTGTGTGCAAATTATTGCTTCATCACTATCACAAGATTCTTCTTATGGGTGG
GCAGGTTTTGTTATTGCTTATCAGTGTCCTTTATCTTCTCTTGAGCAAAGCCTTCTGGTGTAG
Protein sequenceShow/hide protein sequence
MRIFNKVIDELELLELPLANGKFTWSKSGDDSSPSLIDRFFISKSWDLIFENSRTSRQVRSLSDHFPLPFEAGNFQWGPSPFRFYNSWLNQFDCVQIIASSLSQDSSYGW
AGFVIAYQCPLSSLEQSLLV