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Lag0016928 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016928
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:42472026..42474028
RNA-Seq ExpressionLag0016928
SyntenyLag0016928
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW35206.1 hypothetical protein CK203_101901 [Vitis vinifera]1.9e-1540.16Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPISSRDK-
        K E  +++ +E + WRQKA++KW +EGD N  +FHKVA+GRRN+  I  LENE            EE+L +F  LY+  +     ++G+DWSPIS     
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPISSRDK-

Query:  DWNVLLTKEKGIRADQFLWFSI
         WN  L K++ +R   F W  I
Subjt:  DWNVLLTKEKGIRADQFLWFSI
RVW62473.1 putative mitochondrial protein [Vitis vinifera]3.2e-1548.42Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        K E  +++ +E + W+QKAKIKW +EGD N   FHKVA+GRRNKN I  LENE            EE+LL+F  LYS        ++G+DWSPIS
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
RVW94282.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.2e-1546.32Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        K E  +++ +E + WRQKAK+KW ++GD N  +FHKVA GRRN+N I +LENE            EE+LL+F  LYS        + G+DWSPIS
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
RVX11949.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.2e-1548.42Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        K E  +++ +E + W+QKAKIKW +EGD N   FHKVA+GRRNKN I  LENE            EE+LL+F  LYS   +    ++G+DWSPIS
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
RVX23461.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.1e-1546Show/hide
Query:  ESVNLKAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        + V  K E  +++ +E + WRQKAK+KW ++GD N   FHKVA+GRRNKN I +LENE            EE+LL+F  LYS        ++G+DWSPIS
Subjt:  ESVNLKAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
TrEMBL top hitse value%identityAlignment
A0A438DIM3 Uncharacterized protein9.1e-1640.16Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPISSRDK-
        K E  +++ +E + WRQKA++KW +EGD N  +FHKVA+GRRN+  I  LENE            EE+L +F  LY+  +     ++G+DWSPIS     
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPISSRDK-

Query:  DWNVLLTKEKGIRADQFLWFSI
         WN  L K++ +R   F W  I
Subjt:  DWNVLLTKEKGIRADQFLWFSI
A0A438FRA3 Putative mitochondrial protein1.6e-1548.42Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        K E  +++ +E + W+QKAKIKW +EGD N   FHKVA+GRRNKN I  LENE            EE+LL+F  LYS        ++G+DWSPIS
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
A0A438IC57 Transposon TX1 uncharacterized 149 kDa protein1.6e-1546.32Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        K E  +++ +E + WRQKAK+KW ++GD N  +FHKVA GRRN+N I +LENE            EE+LL+F  LYS        + G+DWSPIS
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
A0A438JSN6 LINE-1 retrotransposable element ORF2 protein2.0e-1548.42Show/hide
Query:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        K E  +++ +E + W+QKAKIKW +EGD N   FHKVA+GRRNKN I  LENE            EE+LL+F  LYS   +    ++G+DWSPIS
Subjt:  KAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
A0A438KQJ0 Transposon TX1 uncharacterized 149 kDa protein5.3e-1646Show/hide
Query:  ESVNLKAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
        + V  K E  +++ +E + WRQKAK+KW ++GD N   FHKVA+GRRNKN I +LENE            EE+LL+F  LYS        ++G+DWSPIS
Subjt:  ESVNLKAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENE------------EEVLLFFFALYSPVAAPCPFLDGVDWSPIS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein6.5e-0645.24Show/hide
Query:  WRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENEEEV
        +RQK++IKW ++GD N  +FHKV    + KNLI +L  +++V
Subjt:  WRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENEEEV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCACAAAAACAATCTCTTCTTTGATATTGGCTTCAACAATGGAAGACGGGAGTTGGATAGAGAGGAGAGTGTGAATTTGAAGGCTGAATTTGTGGATATTGTGAA
CAAGGAAGTCGTGAGTTGGAGGCAGAAAGCCAAAATTAAGTGGGCTAGGGAGGGGGACGGTAATCCAACTTATTTTCACAAAGTGGCAAGTGGTAGGAGGAACAAGAATC
TCATTAACTATCTTGAGAATGAGGAGGAGGTGCTTTTGTTTTTCTTTGCCTTGTATAGCCCAGTGGCAGCTCCTTGCCCTTTTTTGGATGGAGTGGATTGGAGCCCTATC
TCTTCGAGGGACAAAGACTGGAATGTTCTCTTAACTAAGGAAAAGGGGATAAGAGCAGATCAATTTTTATGGTTTTCCATCGCCAAATTATCTTCTCAATTTATGGAGTT
TCACATTTTTGATGACTTCGCTAATATTGTGTTTTTCCTCTGCTTTGTACTCACTGCTGATGTAGGAAACCGATTCCAAAACAGTCCAGTACAGTACCCACACGGGAGCC
TCTATGCTTTTCTTGGAACTTATGGCAAGCCGCATGTTTGCGCTTTTATGGAGTCCCCTGTTGTCGCCGCCTCTCTTTCAGTTCTCCTTCCGCTTGGGTATTTCGTTCGA
CCTCTGTTCTCGCTCTCTCCCTCAGCACTGTTGTACATCAAACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCACAAAAACAATCTCTTCTTTGATATTGGCTTCAACAATGGAAGACGGGAGTTGGATAGAGAGGAGAGTGTGAATTTGAAGGCTGAATTTGTGGATATTGTGAA
CAAGGAAGTCGTGAGTTGGAGGCAGAAAGCCAAAATTAAGTGGGCTAGGGAGGGGGACGGTAATCCAACTTATTTTCACAAAGTGGCAAGTGGTAGGAGGAACAAGAATC
TCATTAACTATCTTGAGAATGAGGAGGAGGTGCTTTTGTTTTTCTTTGCCTTGTATAGCCCAGTGGCAGCTCCTTGCCCTTTTTTGGATGGAGTGGATTGGAGCCCTATC
TCTTCGAGGGACAAAGACTGGAATGTTCTCTTAACTAAGGAAAAGGGGATAAGAGCAGATCAATTTTTATGGTTTTCCATCGCCAAATTATCTTCTCAATTTATGGAGTT
TCACATTTTTGATGACTTCGCTAATATTGTGTTTTTCCTCTGCTTTGTACTCACTGCTGATGTAGGAAACCGATTCCAAAACAGTCCAGTACAGTACCCACACGGGAGCC
TCTATGCTTTTCTTGGAACTTATGGCAAGCCGCATGTTTGCGCTTTTATGGAGTCCCCTGTTGTCGCCGCCTCTCTTTCAGTTCTCCTTCCGCTTGGGTATTTCGTTCGA
CCTCTGTTCTCGCTCTCTCCCTCAGCACTGTTGTACATCAAACATTAA
Protein sequenceShow/hide protein sequence
MVHKNNLFFDIGFNNGRRELDREESVNLKAEFVDIVNKEVVSWRQKAKIKWAREGDGNPTYFHKVASGRRNKNLINYLENEEEVLLFFFALYSPVAAPCPFLDGVDWSPI
SSRDKDWNVLLTKEKGIRADQFLWFSIAKLSSQFMEFHIFDDFANIVFFLCFVLTADVGNRFQNSPVQYPHGSLYAFLGTYGKPHVCAFMESPVVAASLSVLLPLGYFVR
PLFSLSPSALLYIKH