; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017089 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017089
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:88486..89811
RNA-Seq ExpressionLag0017089
SyntenyLag0017089
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW19720.1 Mitotic checkpoint protein BUB3.2 [Vitis vinifera]1.7e-1025.55Show/hide
Query:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS--------------------------QSVSFTAKLWLDN---
        +ET++ ++    V S+   R++ W++LD   +AG + ++W + V+E      G++SIS                          + ++    LW D    
Subjt:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS--------------------------QSVSFTAKLWLDN---

Query:  RGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQ---LNGGQPRLDSR-MSSWIILTLKRRWISGGILRNRVAGMVTNSWKKLRVVKTKE
         GDFN+VR+  +  N  + S  M+ F+ FI  +EL+D P+  G    + G    L +R +S    + L      GG+ + +      N W ++     K 
Subjt:  RGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQ---LNGGQPRLDSR-MSSWIILTLKRRWISGGILRNRVAGMVTNSWKKLRVVKTKE

Query:  WNKENVDKATCKKNDTLGRIDCIDNLE
        WNKE++   + KKN    ++   DNLE
Subjt:  WNKENVDKATCKKNDTLGRIDCIDNLE

RVW42591.1 hypothetical protein CK203_085379 [Vitis vinifera]4.6e-1129.24Show/hide
Query:  KKGSSIQKRKNREVTNLLRTWEKEVGDISEND-------VEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENV
        K+G+    RK RE+  L+ T   + G + + D       +  K   DLV       +ET++ ++    V S+   R++ W++LD   SAG + +MW +NV
Subjt:  KKGSSIQKRKNREVTNLLRTWEKEVGDISEND-------VEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENV

Query:  IEVANSILGAYSISQSVSFTAKLWLDN---RGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQL--NGGQ-----PRLD---------S
        +E     +G  S  Q V      W D     GDFN VR+  E+ N  + S  M+ F+ FI  +EL+D  +  G    +GG+      RLD          
Subjt:  IEVANSILGAYSISQSVSFTAKLWLDN---RGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQL--NGGQ-----PRLD---------S

Query:  RMSSWIILTLKRRWISGGILRNRVAGMVTNS------WKKLRVVK--TKEWNKENVDKATCKKNDTLGRIDCIDNLE
        RM   + + L R       +     GM T         KKL+ +K   K WNKE V   T +K+  L  ++  D+LE
Subjt:  RMSSWIILTLKRRWISGGILRNRVAGMVTNS------WKKLRVVK--TKEWNKENVDKATCKKNDTLGRIDCIDNLE

RVX18883.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera]1.0e-1032.26Show/hide
Query:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQSVSF--TAKLWLDNRGDFNLVRWLDERLNANKTSRCMKWFN
        +ET+ +K DR  VSS+W  R+  W+ L    ++G I  +W  N +     +LG++SIS   +      LW+    DFN++R   E+L  ++ +  M+ F+
Subjt:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQSVSF--TAKLWLDNRGDFNLVRWLDERLNANKTSRCMKWFN

Query:  KFIITYELLDLPMDNGQLNGGQPR
         FI   ELLD P+ N       P+
Subjt:  KFIITYELLDLPMDNGQLNGGQPR

XP_023889533.1 uncharacterized protein LOC112001591 [Quercus suber]3.5e-1127.96Show/hide
Query:  REVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQSV-
        R+V NLLR W+                CD+V       +E++LD  + S V S+W S  + W  LD +++AG + +MW + V E  +S++G++SIS  + 
Subjt:  REVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQSV-

Query:  -------------------SFTAKLWLD-------------NRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQ
                           S    +W +               GDFN++R+  ERL  N  S  +  F+ FI  + L+DLP+  G+
Subjt:  -------------------SFTAKLWLD-------------NRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQ

XP_023905831.1 uncharacterized protein LOC112017605 [Quercus suber]1.0e-1027.66Show/hide
Query:  KNREVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS--
        K   V NLLR W+                CD+V       +ET+LD    + V S+W S  + W  LD +++AG + +MW   V E+ +S++G++SIS  
Subjt:  KNREVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS--

Query:  ------------------QSVSFTAKLWLD-------------NRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQ
                             S    +W +               GDFN++R+  ERL  N  S  +  F+ FI  + L+DLP+  G+
Subjt:  ------------------QSVSFTAKLWLD-------------NRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQ

TrEMBL top hitse value%identityAlignment
A0A2N9ER93 Reverse transcriptase domain-containing protein5.3e-1331.1Show/hide
Query:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS--------------------QSVSFTAKLWLDNR--------
        +ET+LDK+D   + SIW +R +AW++LD VN+AG + ++W + V+E+A+  +G +S+S                        F    W + R        
Subjt:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS--------------------QSVSFTAKLWLDNR--------

Query:  -----GDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMD-------NGQLNGGQPRLD
             GDFN+VR+  ERL  ++ S  M  F+ FI    L+DLP+        NG  N    R+D
Subjt:  -----GDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMD-------NGQLNGGQPRLD

A0A2N9G357 Uncharacterized protein6.9e-1331.22Show/hide
Query:  RKNREVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS-
        RK   V NLLR W                 CD+V       +ET+LD +D   V S+WS+ +I W  ++ VN+AG I +MW + V++  +S +G +S+S 
Subjt:  RKNREVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS-

Query:  -----------------------QSVSFTAKL----------WLDNRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNG
                               Q  +F A+L          W    GDFN+VR+  ER++ N+ S  M  F+ FI T +L+DLP++ G
Subjt:  -----------------------QSVSFTAKL----------WLDNRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNG

A0A2N9GPQ4 Uncharacterized protein1.8e-1326.73Show/hide
Query:  EKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQSVSFTAKL--WLDN--RGDFNLVRWLDERLNANKTSRCMK
        E+ET+LD I R  V S+W   H+ W+      ++G I +MW   V+E  +  +G +S+S      A    W  +   GDFN++R+  ERL A++ +  M 
Subjt:  EKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQSVSFTAKL--WLDN--RGDFNLVRWLDERLNANKTSRCMK

Query:  WFNKFIITYELLDLPMDNGQLNGGQPRLDSRMS--SWIILTLKRRWISGGILRNRVAGMVTNSWKKLRVVKTKEWNKENVDKATCKKNDTLGRIDCIDNL
         F++FI +  L+D+P++ G+      R    MS   W + +         +     + ++    K L+ +  K+WN+E       K+   + ++D +D +
Subjt:  WFNKFIITYELLDLPMDNGQLNGGQPRLDSRMS--SWIILTLKRRWISGGILRNRVAGMVTNSWKKLRVVKTKEWNKENVDKATCKKNDTLGRIDCIDNL

Query:  EE
         E
Subjt:  EE

A0A2N9GTU2 Reverse transcriptase domain-containing protein5.3e-1331.61Show/hide
Query:  RKNREVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQ
        +K   V NLLR W                 CD+V       +ET+LD +D   + S+W S+++ W+ LD  N+AG I +MW   V+E  ++++G +S+S 
Subjt:  RKNREVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQ

Query:  SVSFTAKLWLDNRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNG
                +    GDFN +R   ERL  N+ +  M  F+ +I +  L+DLP+  G
Subjt:  SVSFTAKLWLDNRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNG

A0A2N9HYC0 Protein kinase domain-containing protein5.3e-1325.88Show/hide
Query:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS------------------------------QSVSFTAKLW--
        +ET+L  + +  + S+W  R++ WL+LD V ++G I +MW + V++  +  +G +S+S                              + ++  A  W  
Subjt:  KETRLDKIDRSHVSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSIS------------------------------QSVSFTAKLW--

Query:  -LDNRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQLNGGQPRLDSRMSSWIILTLKRRWISGGILRNRVAGMVTNSWKKLRVVKTKE
             GDFN+VR+  ER+ A   S  M+ F  FI +  LLDLPMD G  +G            ++     +W +        + ++    K L+ V  + 
Subjt:  -LDNRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQLNGGQPRLDSRMSSWIILTLKRRWISGGILRNRVAGMVTNSWKKLRVVKTKE

Query:  WNKENVDKATCKKNDTLGRIDCIDNLEE
        WNKE       +KND   +I  +D +EE
Subjt:  WNKENVDKATCKKNDTLGRIDCIDNLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTTAGAGGCTCAATGAACTCAGAGGTTGACTTAAATGGGATCGACAGTATGGTTGGTCAGTCGATAGATAACCTAAAGGCTTTGGCCATTATCCCGCCAGAAAA
ACAACCTCTGTATCATATCGATTTTGGGTTCAAATTCAAGAAAGGTAGCTCTATACAGAAAAGAAAGAATAGAGAGGTGACAAACCTCCTCAGAACGTGGGAAAAGGAAG
TTGGAGACATCTCAGAGAACGATGTAGAAGAAAAGGGATATTGCGATTTAGTTGGTAGCTTAAACAAGGTCGAAAAGGAAACTAGGCTTGATAAAATTGATAGAAGTCAT
GTGAGCTCCATTTGGAGCTCGAGGCACATAGCTTGGTTGACTTTAGATGTTGTCAATTCGGCGGGACGTATTTTCATCATGTGGAAAGAGAATGTCATCGAAGTGGCGAA
CTCGATCTTAGGGGCCTACTCCATCTCTCAGAGTGTATCTTTTACGGCAAAACTGTGGCTGGATAACAGGGGGGACTTTAATTTGGTTAGATGGCTGGATGAAAGATTGA
ATGCTAACAAAACCTCCAGATGTATGAAGTGGTTTAACAAATTCATAATCACTTATGAGCTTTTAGATCTGCCAATGGATAACGGGCAGTTAAATGGGGGCCAACCCCGT
TTAGATTCGAGAATGTCTAGTTGGATCATCCTAACTTTAAAAAGAAGATGGATCAGTGGTGGAATACTGAGAAATCGAGTGGCTGGGATGGTTACAAATTCATGGAAAAA
GCTGAGAGTTGTGAAAACTAAAGAGTGGAACAAAGAAAATGTTGATAAGGCAACATGTAAGAAAAATGATACCCTAGGTCGAATTGACTGCATTGACAACTTAGAAGAGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTTAGAGGCTCAATGAACTCAGAGGTTGACTTAAATGGGATCGACAGTATGGTTGGTCAGTCGATAGATAACCTAAAGGCTTTGGCCATTATCCCGCCAGAAAA
ACAACCTCTGTATCATATCGATTTTGGGTTCAAATTCAAGAAAGGTAGCTCTATACAGAAAAGAAAGAATAGAGAGGTGACAAACCTCCTCAGAACGTGGGAAAAGGAAG
TTGGAGACATCTCAGAGAACGATGTAGAAGAAAAGGGATATTGCGATTTAGTTGGTAGCTTAAACAAGGTCGAAAAGGAAACTAGGCTTGATAAAATTGATAGAAGTCAT
GTGAGCTCCATTTGGAGCTCGAGGCACATAGCTTGGTTGACTTTAGATGTTGTCAATTCGGCGGGACGTATTTTCATCATGTGGAAAGAGAATGTCATCGAAGTGGCGAA
CTCGATCTTAGGGGCCTACTCCATCTCTCAGAGTGTATCTTTTACGGCAAAACTGTGGCTGGATAACAGGGGGGACTTTAATTTGGTTAGATGGCTGGATGAAAGATTGA
ATGCTAACAAAACCTCCAGATGTATGAAGTGGTTTAACAAATTCATAATCACTTATGAGCTTTTAGATCTGCCAATGGATAACGGGCAGTTAAATGGGGGCCAACCCCGT
TTAGATTCGAGAATGTCTAGTTGGATCATCCTAACTTTAAAAAGAAGATGGATCAGTGGTGGAATACTGAGAAATCGAGTGGCTGGGATGGTTACAAATTCATGGAAAAA
GCTGAGAGTTGTGAAAACTAAAGAGTGGAACAAAGAAAATGTTGATAAGGCAACATGTAAGAAAAATGATACCCTAGGTCGAATTGACTGCATTGACAACTTAGAAGAGT
AG
Protein sequenceShow/hide protein sequence
MPFRGSMNSEVDLNGIDSMVGQSIDNLKALAIIPPEKQPLYHIDFGFKFKKGSSIQKRKNREVTNLLRTWEKEVGDISENDVEEKGYCDLVGSLNKVEKETRLDKIDRSH
VSSIWSSRHIAWLTLDVVNSAGRIFIMWKENVIEVANSILGAYSISQSVSFTAKLWLDNRGDFNLVRWLDERLNANKTSRCMKWFNKFIITYELLDLPMDNGQLNGGQPR
LDSRMSSWIILTLKRRWISGGILRNRVAGMVTNSWKKLRVVKTKEWNKENVDKATCKKNDTLGRIDCIDNLEE