; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017115 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017115
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:314580..315436
RNA-Seq ExpressionLag0017115
SyntenyLag0017115
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON86224.1 hypothetical protein TorRG33x02_179430, partial [Trema orientale]5.8e-0535.21Show/hide
Query:  KNHDLLAKWVCQFQTERDALWRILVAAKYDSLPH---HGLVFISTAKGPWKFIIKQQRLVTNRIKFGVGDG
        +N  L+ KW+C+F  E+DALW  ++ +KY    +     +   +T + PWKFI+KQ  +    + F VG+G
Subjt:  KNHDLLAKWVCQFQTERDALWRILVAAKYDSLPH---HGLVFISTAKGPWKFIIKQQRLVTNRIKFGVGDG

TrEMBL top hitse value%identityAlignment
A0A2N9E179 Reverse transcriptase domain-containing protein3.7e-0540.26Show/hide
Query:  LKDKNHDLLAKWVCQFQTERDALWRILVAAKYDSLPHHGLVFISTAK---GPWKFIIKQQRLVTNRIKFGVGDGALI
        L+  N  LL KW+ +F TER+ALWR ++ AKY ++    +  + T     G WKFI  +       +KF VGDG+LI
Subjt:  LKDKNHDLLAKWVCQFQTERDALWRILVAAKYDSLPHHGLVFISTAK---GPWKFIIKQQRLVTNRIKFGVGDGALI

A0A2N9HGF2 Reverse transcriptase domain-containing protein1.4e-0438.54Show/hide
Query:  LPNGPKFSYPLTKVVSAYTLLKDKNHDLLAKWVCQFQTERDALWRILVAAKYDSLPHHGLVFISTAKGP-----WKFIIKQQRLVTNRIKFGVGDG
        L N  +   PL     A   LK  N  LL KW+ ++ +ER+ALWR++V AKY SL   G     + +GP     WKFI K     +    F VGDG
Subjt:  LPNGPKFSYPLTKVVSAYTLLKDKNHDLLAKWVCQFQTERDALWRILVAAKYDSLPHHGLVFISTAKGP-----WKFIIKQQRLVTNRIKFGVGDG

A0A2N9I2C8 Reverse transcriptase domain-containing protein1.4e-0438.54Show/hide
Query:  LPNGPKFSYPLTKVVSAYTLLKDKNHDLLAKWVCQFQTERDALWRILVAAKYDSLPHHGLVFISTAKGP-----WKFIIKQQRLVTNRIKFGVGDG
        L N  +   PL     A   LK  N  LL KW+ ++ +ER+ALWR++V AKY SL   G     + +GP     WKFI K     +    F VGDG
Subjt:  LPNGPKFSYPLTKVVSAYTLLKDKNHDLLAKWVCQFQTERDALWRILVAAKYDSLPHHGLVFISTAKGP-----WKFIIKQQRLVTNRIKFGVGDG

A0A2N9IMI6 Reverse transcriptase domain-containing protein4.8e-0538.16Show/hide
Query:  NHDLLAKWVCQFQTERDALWRILVAAKYDSLP---HHGLVFISTAKGPWKFIIKQQRLVTNRIKFGVGDGALILHF
        N  LL KW+ +F  ER+ALWR ++ AKY SL      G V        WK I ++  +V++ + F +GDG+++L F
Subjt:  NHDLLAKWVCQFQTERDALWRILVAAKYDSLP---HHGLVFISTAKGPWKFIIKQQRLVTNRIKFGVGDGALILHF

A0A2P5EL14 Uncharacterized protein (Fragment)2.8e-0535.21Show/hide
Query:  KNHDLLAKWVCQFQTERDALWRILVAAKYDSLPH---HGLVFISTAKGPWKFIIKQQRLVTNRIKFGVGDG
        +N  L+ KW+C+F  E+DALW  ++ +KY    +     +   +T + PWKFI+KQ  +    + F VG+G
Subjt:  KNHDLLAKWVCQFQTERDALWRILVAAKYDSLPH---HGLVFISTAKGPWKFIIKQQRLVTNRIKFGVGDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGGATTTCTTGGAGAACATTCTTCTTGCAGAAGGCTTTGGCTCTAAATGGAGACTGTGGAAAGGTGGTGCTGGTGGTTCTGAACAGCACCTTGCCAAATGGGCC
AAAATTCTCCTATCCATTGACTAAGGTGGTTTCGGCCTACACTCTTTTGAAAGACAAAAATCATGATCTTCTGGCCAAATGGGTTTGTCAGTTCCAGACCGAAAGGGACG
CTCTATGGAGAATACTCGTAGCTGCAAAATATGACTCCCTTCCTCACCATGGCTTGGTCTTCATTTCTACAGCTAAAGGTCCATGGAAATTCATTATTAAACAGCAAAGA
CTTGTGACAAACAGAATTAAATTCGGGGTTGGTGATGGTGCGCTTATACTTCATTTTGGTCTCACCAATGGTTGGCTAAAGGTATTCTTGCTTTACACCACCCTCTCCTT
TTTTGCTCTTTCTCATCACGGATTTGCACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGGATTTCTTGGAGAACATTCTTCTTGCAGAAGGCTTTGGCTCTAAATGGAGACTGTGGAAAGGTGGTGCTGGTGGTTCTGAACAGCACCTTGCCAAATGGGCC
AAAATTCTCCTATCCATTGACTAAGGTGGTTTCGGCCTACACTCTTTTGAAAGACAAAAATCATGATCTTCTGGCCAAATGGGTTTGTCAGTTCCAGACCGAAAGGGACG
CTCTATGGAGAATACTCGTAGCTGCAAAATATGACTCCCTTCCTCACCATGGCTTGGTCTTCATTTCTACAGCTAAAGGTCCATGGAAATTCATTATTAAACAGCAAAGA
CTTGTGACAAACAGAATTAAATTCGGGGTTGGTGATGGTGCGCTTATACTTCATTTTGGTCTCACCAATGGTTGGCTAAAGGTATTCTTGCTTTACACCACCCTCTCCTT
TTTTGCTCTTTCTCATCACGGATTTGCACCGTGA
Protein sequenceShow/hide protein sequence
MIGISWRTFFLQKALALNGDCGKVVLVVLNSTLPNGPKFSYPLTKVVSAYTLLKDKNHDLLAKWVCQFQTERDALWRILVAAKYDSLPHHGLVFISTAKGPWKFIIKQQR
LVTNRIKFGVGDGALILHFGLTNGWLKVFLLYTTLSFFALSHHGFAP