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Lag0017170 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017170
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr5:726229..726666
RNA-Seq ExpressionLag0017170
SyntenyLag0017170
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649999.1 hypothetical protein Csa_010276, partial [Cucumis sativus]5.0e-5171.03Show/hide
Query:  VFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMG---RDGEEGIETSVLPCFHEFHKVCVDRW
        VFFFFYNN +G R RPR KQATP PR G+SSLR       +  DDC  +ALSS  KAL+GE CCVCLSSMG   RDG++G+ TSVLPC HEFHKVCV+RW
Subjt:  VFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMG---RDGEEGIETSVLPCFHEFHKVCVDRW

Query:  FEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF
        FEECRRTCPICRYSMEGG +      QILTDEMVIWFSSFHTSGF
Subjt:  FEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF

KAG6577791.1 Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5573.65Show/hide
Query:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCV-ALSSPGKALQGERCCVCLSSMG-RDGEEGIETSVLPCFHEFHKVCVD
        MVFNK+FFFFYNN +G R  P LKQATP PR  DSSLR       +TPDDCV ALSSP KAL+GE CCVCLS MG +D +EGI TSVLPC HEFHK+C+D
Subjt:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCV-ALSSPGKALQGERCCVCLSSMG-RDGEEGIETSVLPCFHEFHKVCVD

Query:  RWFEECRRTCPICRYSMEGGENDHKNGT-QILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSMEGG N+H++G+ ++LTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGENDHKNGT-QILTDEMVIWFSSFHTSGF

KAG7015830.1 Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-5573.65Show/hide
Query:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCV-ALSSPGKALQGERCCVCLSSMG-RDGEEGIETSVLPCFHEFHKVCVD
        MVFNK+FFFFYNN +G R  P LKQATP PR  DSSLR        TPDDCV ALSSP KAL+GE CCVCLS MG +D +EGI TSVLPC HEFHK+C+D
Subjt:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCV-ALSSPGKALQGERCCVCLSSMG-RDGEEGIETSVLPCFHEFHKVCVD

Query:  RWFEECRRTCPICRYSMEGGENDHKNGT-QILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSMEGG N+H++G+ ++LTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGENDHKNGT-QILTDEMVIWFSSFHTSGF

XP_022145297.1 E3 ubiquitin-protein ligase SDIR1-like [Momordica charantia]3.1e-5375.34Show/hide
Query:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGER-CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDR
        MVFN+VFFFFY NF+G R RP+LKQ T  P GGDS+LR  V++ES  P DCV LSS GKAL+GE  CCVCLSS+    EEGIETSVLPC HEFHKVCVDR
Subjt:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGER-CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDR

Query:  WFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF
        WFEE RRTCPICRYSMEG    ++NGTQILTDEMVIWFSSFHTSGF
Subjt:  WFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF

XP_038906276.1 E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]6.3e-5473.86Show/hide
Query:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMG-----RDGEEGIETSVLPCFHEFH
        MVFNKVFFFFYNNF+G R R R KQATP P GG+ SLR       +TPDDC  V LSSP KAL+GE CCVCLSSMG     RD   G  TSVLPC HEFH
Subjt:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMG-----RDGEEGIETSVLPCFHEFH

Query:  KVCVDRWFEECRRTCPICRYSMEGGENDHKNGT-QILTDEMVIWFSSFHTSGF
        KVCVDRWFEECRRTCPICRYSMEGG   H++GT QILTDEMVIWFSSFHTSGF
Subjt:  KVCVDRWFEECRRTCPICRYSMEGGENDHKNGT-QILTDEMVIWFSSFHTSGF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W7 RING-type domain-containing protein4.0e-5471.33Show/hide
Query:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMG---RDGEEGIETSVLPCFHEFHKV
        M+FNKVFFFFYNN +G R RPR KQATP PR G+SSLR       +  DDC  +ALSS  KAL+GE CCVCLSSMG   RDG++G+ TSVLPC HEFHKV
Subjt:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMG---RDGEEGIETSVLPCFHEFHKV

Query:  CVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF
        CV+RWFEECRRTCPICRYSMEGG +      QILTDEMVIWFSSFHTSGF
Subjt:  CVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF

A0A1U8JQD6 E3 ubiquitin-protein ligase At4g11680-like6.0e-2645.33Show/hide
Query:  MVFNKVFFFFYNNFVGVR-----DRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKV
        M+ NK+  F Y   VGVR     +  R K+ATPPP    ++  + V E +    +  + S    + +GE CCVCLSSM    EEG ET VLPCFHEFH+V
Subjt:  MVFNKVFFFFYNNFVGVR-----DRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKV

Query:  CVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF
        CVD+W   C++ CPICR+SM   +    +  +  T+EM+IWFSSFH +GF
Subjt:  CVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF

A0A5D3CJ45 E3 ubiquitin-protein ligase RNF137.0e-5170.97Show/hide
Query:  MVFNKVFFFFYNNFVGVRDRP-RLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMGR---DGEEGI--ETSVLPCFHEF
        MVFNKVFFFFYNNF+G R RP R KQATP P GG+SSLR       +  DDC  +ALSS  KAL+GE CCVCLSSMG    DG++G+   TSVLPC HEF
Subjt:  MVFNKVFFFFYNNFVGVRDRP-RLKQATPPPRGGDSSLRLRVKEESVTPDDC--VALSSPGKALQGERCCVCLSSMGR---DGEEGI--ETSVLPCFHEF

Query:  HKVCVDRWFEECRRTCPICRYSME-GGENDHKNGT-QILTDEMVIWFSSFHTSGF
        HKVCV+RWFEECRRTCPICRYSME GG   H++ T QILTDEMVIWFSSFHTSGF
Subjt:  HKVCVDRWFEECRRTCPICRYSME-GGENDHKNGT-QILTDEMVIWFSSFHTSGF

A0A5J5S3V6 RING-type domain-containing protein6.0e-2645.33Show/hide
Query:  MVFNKVFFFFYNNFVGVR-----DRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKV
        M+ NK+  F Y   VGVR     +  R K+ATPPP    ++  + V E +    +  + S    + +GE CCVCLSSM    EEG ET VLPCFHEFH+V
Subjt:  MVFNKVFFFFYNNFVGVR-----DRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKV

Query:  CVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF
        CVD+W   C++ CPICR+SM   +    +  +  T+EM+IWFSSFH +GF
Subjt:  CVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF

A0A6J1CW69 E3 ubiquitin-protein ligase SDIR1-like1.5e-5375.34Show/hide
Query:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGER-CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDR
        MVFN+VFFFFY NF+G R RP+LKQ T  P GGDS+LR  V++ES  P DCV LSS GKAL+GE  CCVCLSS+    EEGIETSVLPC HEFHKVCVDR
Subjt:  MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGER-CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDR

Query:  WFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF
        WFEE RRTCPICRYSMEG    ++NGTQILTDEMVIWFSSFHTSGF
Subjt:  WFEECRRTCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF

SwissProt top hitse value%identityAlignment
Q5XIL0 E3 ubiquitin-protein ligase RNF1679.2e-0837.93Show/hide
Query:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENDHK
        C +CL     + E+G +  +LPC H +H  CVD W  + R+TCPIC+  +  G  D +
Subjt:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENDHK

Q68DV7 E3 ubiquitin-protein ligase RNF437.8e-0740Show/hide
Query:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEN
        C +CL        EG E  V+ C HEFH+ CVD W  +  RTCP+C +++  G++
Subjt:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEN

Q8BP31 RING finger protein 1227.8e-0738.37Show/hide
Query:  VALSSPGKALQ--GERCCVCLSSM-GRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMV
        V L    K LQ  G+ C VCL    G+D     E  VLPC H FH+ C+ +W  E R  CP+C   +  G  +      IL DE+V
Subjt:  VALSSPGKALQ--GERCCVCLSSM-GRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENDHKNGTQILTDEMV

Q91XF4 E3 ubiquitin-protein ligase RNF1677.1e-0839.66Show/hide
Query:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENDHK
        C +CL     + E+G +  VLPC H +H  CVD W  + R+TCPIC+  +  G  D +
Subjt:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENDHK

Q9H6Y7 E3 ubiquitin-protein ligase RNF1675.4e-0839.68Show/hide
Query:  KALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEND
        K  Q + C +CL     + E+G +  VLPC H +H  CVD W  + R+TCPIC+  +  G  D
Subjt:  KALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEND

Arabidopsis top hitse value%identityAlignment
AT3G51325.1 RING/U-box superfamily protein1.5e-1343.53Show/hide
Query:  GKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRR-TCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFH
        G+  + E C VCL  M  + ++ I++  LPC HEFH +CVD WF   R+  CP+CR+S           T +LTDE+++WFSSFH
Subjt:  GKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRR-TCPICRYSMEGGENDHKNGTQILTDEMVIWFSSFH

AT3G61180.1 RING/U-box superfamily protein1.2e-0740Show/hide
Query:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYS-MEGGE
        C +CL +     E+G+E   LPC H FH +CVD+W      TCP+C+++ ++ GE
Subjt:  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYS-MEGGE

AT4G32600.1 RING/U-box superfamily protein9.5e-0829.84Show/hide
Query:  DRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPG----------KALQGER--CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRR
        D  + + ATP       + + ++K+     DD  + +S G          +A+ GE   CC+CL+    +     E   LPC H FHK CVD+W  +   
Subjt:  DRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPG----------KALQGER--CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRR

Query:  TCPICRYSMEGGENDHKNGTQILT
        +CP+C+ S  G +N       ILT
Subjt:  TCPICRYSMEGGENDHKNGTQILT

AT5G45290.1 RING/U-box superfamily protein3.8e-0939.34Show/hide
Query:  VALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICR
        + L +  ++    +C +CL     + EE      LPC HEFHK CVD+W +E  R CP+CR
Subjt:  VALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICR

AT5G45290.2 RING/U-box superfamily protein9.5e-0838.71Show/hide
Query:  VALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECR-RTCPICR
        + L +  ++    +C +CL     + EE      LPC HEFHK CVD+W +E   R CP+CR
Subjt:  VALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECR-RTCPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTTGGCGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCACCTCCTCGCGGTGGCGATTCGAGCCT
TCGACTGAGGGTGAAGGAGGAGTCTGTGACACCTGATGATTGTGTAGCTCTTTCGAGTCCTGGGAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGG
GTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATA
TGTCGGTATTCAATGGAAGGTGGAGAGAATGATCATAAAAATGGGACTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTTGGCGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCACCTCCTCGCGGTGGCGATTCGAGCCT
TCGACTGAGGGTGAAGGAGGAGTCTGTGACACCTGATGATTGTGTAGCTCTTTCGAGTCCTGGGAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGG
GTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATA
TGTCGGTATTCAATGGAAGGTGGAGAGAATGATCATAAAAATGGGACTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA
Protein sequenceShow/hide protein sequence
MVFNKVFFFFYNNFVGVRDRPRLKQATPPPRGGDSSLRLRVKEESVTPDDCVALSSPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPI
CRYSMEGGENDHKNGTQILTDEMVIWFSSFHTSGF