; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017228 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017228
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr5:1188792..1190209
RNA-Seq ExpressionLag0017228
SyntenyLag0017228
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]3.5e-3947.67Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD
        M+GLSLGV++  +Q++I+YRHP ++  G+VRF+P  I N Q M+ MFSIALP PN+VHLYV V  + D A N    P       + +D EPES APP C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE---NITRRFITREGASY
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD+  EHDPI+ P+   N  LY G+IC++KE   ++ + F  +  A Y
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE---NITRRFITREGASY

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]5.6e-3746.63Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCD
        M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIAL  PN+VHLYV V  + D A N    P       + +D EPES AP  C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   +++ + F  +  A Y
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.8e-3649.43Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD
        M+GLSLGV++  +Q++I+YRH  ++  G+VRFMP  I N Q M+ MFSI LP  N+VHLYV V  + D A N    P       + +D EPES APP C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++KE
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE

KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]1.1e-6153.28Show/hide
Query:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALP
        M DK LGF+L +NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+++R + ++I+YRHP+++P G +RFMP  IPN QAM  MFSIA+P
Subjt:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALP

Query:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETD---DEFEDLDFDDREHTIPSVVFTQLDGHTVDST
        + N+VHLYVNV R+  +     +   Q  + +Q I P+ E VA    D E+++ +N   + RTE D   DEFE+ DFD REH +PS   TQ+D   +DS 
Subjt:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETD---DEFEDLDFDDREHTIPSVVFTQLDGHTVDST

Query:  IEHDPIVAPVPVQNDLLYKGLICQDKENI
         EHDPIVAP+ V N  LYKG+ICQDKE +
Subjt:  IEHDPIVAPVPVQNDLLYKGLICQDKENI

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.0e-3947.67Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD
        M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIALP PN+VHLYV V  + D A N    P       + +D EPES APP C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   +++ + F  +  A Y
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein1.7e-3947.67Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD
        M+GLSLGV++  +Q++I+YRHP ++  G+VRF+P  I N Q M+ MFSIALP PN+VHLYV V  + D A N    P       + +D EPES APP C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE---NITRRFITREGASY
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD+  EHDPI+ P+   N  LY G+IC++KE   ++ + F  +  A Y
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE---NITRRFITREGASY

A0A5A7T1X8 SWIM-type domain-containing protein2.7e-3746.63Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCD
        M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIAL  PN+VHLYV V  + D A N    P       + +D EPES AP  C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   +++ + F  +  A Y
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY

A0A5A7THR5 Uncharacterized protein5.4e-6253.28Show/hide
Query:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALP
        M DK LGF+L +NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+++R + ++I+YRHP+++P G +RFMP  IPN QAM  MFSIA+P
Subjt:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALP

Query:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETD---DEFEDLDFDDREHTIPSVVFTQLDGHTVDST
        + N+VHLYVNV R+  +     +   Q  + +Q I P+ E VA    D E+++ +N   + RTE D   DEFE+ DFD REH +PS   TQ+D   +DS 
Subjt:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETD---DEFEDLDFDDREHTIPSVVFTQLDGHTVDST

Query:  IEHDPIVAPVPVQNDLLYKGLICQDKENI
         EHDPIVAP+ V N  LYKG+ICQDKE +
Subjt:  IEHDPIVAPVPVQNDLLYKGLICQDKENI

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.9e-3947.67Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD
        M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIALP PN+VHLYV V  + D A N    P       + +D EPES APP C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   +++ + F  +  A Y
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---ENITRRFITREGASY

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-3649.43Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD
        M+GLSLGV++  +Q++I+YRH  ++  G+VRFMP  I N Q M+ MFSI LP  N+VHLYV V  + D A N    P       + +D EPES APP C 
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CD

Query:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE
         E++V  N + E RTETDDEFE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++KE
Subjt:  GEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATAAATGTTTGGGATTTGTTTTGCATATGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGC
TCGTAGTGGGGTTGTCTTTGAACAATTTATTGAAATGATAGGATTATCGTTGGGTGTAAATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCAC
CATTAGGATCAGTTAGATTTATGCCAATATCTATCCCTAACAATCAAGCGATGGATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAAT
GTCAGAAGAATAGAAGATAATGCACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCCGAGCCTGAATCAGTAGCACCACCATGTGA
TGGTGAAGATGTAGTTGTTGATAATACATTTAAAGAGTTAAGGACCGAAACAGATGATGAGTTTGAAGATTTGGATTTTGATGATCGTGAACATACAATCCCTTCAGTAG
TATTCACCCAACTAGATGGTCACACAGTAGATAGCACTATAGAACATGACCCAATTGTAGCACCAGTGCCAGTTCAAAATGATTTGTTGTACAAGGGTTTGATTTGTCAA
GACAAAGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCGTATGGTCAAGCGAGGTCATGCTTCAGACGCATCCGTGATCTCTCTGAAGATATGCAGATCTT
AAATTTGTGCAACAGTGGTGATGACAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCATGGACCTAGGCGTAGAAGAGGTGCTCGTGCCCAAG
AAGAGGATGTTCCAGTACAAGAGGATATTCTGGTACAGGAGAATATTCCAGTACAACCTTATATTCCAGTATATGAGGATGTTCCAGTACAGCCTCATATTACAGTACAT
GAGCATATTCCAGTCCAGGAGCCTTTCCCACCAGTTATACCAGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTGCTGGTCCGTC
CACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGGCGTGGACGTGGACGTGGAGAGCATGCACAATATGTAT
ACCCTACAGAGCTTGTAGAGGAACCTAGGGAAGAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACGTCCGCCTTGTGGC
ACACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATAAATGTTTGGGATTTGTTTTGCATATGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGC
TCGTAGTGGGGTTGTCTTTGAACAATTTATTGAAATGATAGGATTATCGTTGGGTGTAAATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCAC
CATTAGGATCAGTTAGATTTATGCCAATATCTATCCCTAACAATCAAGCGATGGATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAAT
GTCAGAAGAATAGAAGATAATGCACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCCGAGCCTGAATCAGTAGCACCACCATGTGA
TGGTGAAGATGTAGTTGTTGATAATACATTTAAAGAGTTAAGGACCGAAACAGATGATGAGTTTGAAGATTTGGATTTTGATGATCGTGAACATACAATCCCTTCAGTAG
TATTCACCCAACTAGATGGTCACACAGTAGATAGCACTATAGAACATGACCCAATTGTAGCACCAGTGCCAGTTCAAAATGATTTGTTGTACAAGGGTTTGATTTGTCAA
GACAAAGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCGTATGGTCAAGCGAGGTCATGCTTCAGACGCATCCGTGATCTCTCTGAAGATATGCAGATCTT
AAATTTGTGCAACAGTGGTGATGACAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCATGGACCTAGGCGTAGAAGAGGTGCTCGTGCCCAAG
AAGAGGATGTTCCAGTACAAGAGGATATTCTGGTACAGGAGAATATTCCAGTACAACCTTATATTCCAGTATATGAGGATGTTCCAGTACAGCCTCATATTACAGTACAT
GAGCATATTCCAGTCCAGGAGCCTTTCCCACCAGTTATACCAGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTGCTGGTCCGTC
CACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGGCGTGGACGTGGACGTGGAGAGCATGCACAATATGTAT
ACCCTACAGAGCTTGTAGAGGAACCTAGGGAAGAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACGTCCGCCTTGTGGC
ACACATTAG
Protein sequenceShow/hide protein sequence
MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVN
VRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPPCDGEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQ
DKENITRRFITREGASYGQARSCFRRIRDLSEDMQILNLCNSGDDNMEQLHYMYNIPIAPPHGPRRRRGARAQEEDVPVQEDILVQENIPVQPYIPVYEDVPVQPHITVH
EHIPVQEPFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGRGEHAQYVYPTELVEEPREEEDPDDQVPRARRRQPARNRRRPPCG
TH