CuGenDBv2

Gene ID	Lag0017253
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ATP-dependent RNA helicase Dbp73D isoform 1
Genome location	chr5:1442721..1446054
RNA-Seq Expression	Lag0017253
Synteny	Lag0017253
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146112.1 uncharacterized protein LOC101208810 isoform X1 [Cucumis sativus]

2.2e-52

94.74

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATS A A+HGIEVAVEFKPVEHPIEPLDND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDL
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE EVGETRPR
Subjt:  PVMKEGEVGETRPR

XP_008448622.1 PREDICTED: uncharacterized protein LOC103490741 isoform X2 [Cucumis melo]

7.6e-53

95.61

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATS AAA+HGIEVAVEFKPVEHPIEPLDND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDL
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE EVGETRPR
Subjt:  PVMKEGEVGETRPR

XP_022943295.1 uncharacterized protein LOC111448107 isoform X1 [Cucurbita moschata]

5.4e-51

90.35

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLP  PE+TGVS T+AAAA+HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSS+RK+PD+
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE E+GETRPR
Subjt:  PVMKEGEVGETRPR

XP_023005793.1 uncharacterized protein LOC111498687 isoform X1 [Cucurbita maxima]

5.4e-51

90.35

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLP  PESTGVS T+AAAA+HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSS+R++PD+
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE E+GETRPR
Subjt:  PVMKEGEVGETRPR

XP_038891759.1 uncharacterized protein LOC120081150 isoform X1 [Benincasa hispida]

2.6e-53

96.49

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFS+SRTGHRRAQSALDGREGLPPNPESTGVSATS AAA+HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE EVGETRPR
Subjt:  PVMKEGEVGETRPR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L159 Uncharacterized protein

1.1e-52

94.74

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATS A A+HGIEVAVEFKPVEHPIEPLDND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDL
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE EVGETRPR
Subjt:  PVMKEGEVGETRPR

A0A1S3BL03 uncharacterized protein LOC103490741 isoform X2

3.7e-53

95.61

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATS AAA+HGIEVAVEFKPVEHPIEPLDND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDL
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE EVGETRPR
Subjt:  PVMKEGEVGETRPR

A0A6J1FXM9 uncharacterized protein LOC111448107 isoform X1

2.6e-51

90.35

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLP  PE+TGVS T+AAAA+HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSS+RK+PD+
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE E+GETRPR
Subjt:  PVMKEGEVGETRPR

A0A6J1HNC4 uncharacterized protein LOC111465213 isoform X1

5.5e-49

91.23

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDG+ GLPPNPE+TGVSAT  AA +HGIEVAVEFKPVEHPIEP DND+PIQCPLPEPSILNDGRIWKERVSSIRKLPDL
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE EVGETRPR
Subjt:  PVMKEGEVGETRPR

A0A6J1L360 uncharacterized protein LOC111498687 isoform X1

2.6e-51

90.35

Show/hide

Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL
        MVGIFSRFSSSRTGHRRAQSALDGREGLP  PESTGVS T+AAAA+HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSS+R++PD+
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDL

Query:  PVMKEGEVGETRPR
        PVMKE E+GETRPR
Subjt:  PVMKEGEVGETRPR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G31940.1 unknown protein

1.5e-35

65.18

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVS-SIRKLPD
        MVGIFSRFS  R+ HRR QSA+D +E L PN +    + T+A  A HGIEVA EFKPVEHP+EPLDND PIQCPLPEPSILNDGRIWKERVS S+R+  D
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVS-SIRKLPD

Query:  LPVMKEGEVGET
        L ++K+    E+
Subjt:  LPVMKEGEVGET

AT2G01913.1 unknown protein

1.8e-04

65.52

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Query:  VEFKPVEHPIEPLDNDRPIQCPLPEPSIL
        VEF PVEHPIEP + DRP++CP+P  S L
Subjt:  VEFKPVEHPIEPLDNDRPIQCPLPEPSIL

AT2G35585.1 unknown protein

2.7e-32

63.89

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Query:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERV--SSIRKLP
        MVGIFSRFS  R  HRR QSA+DGRE L P  +    + T+     HGIEVA EFKPV+HP+EPLDND+PIQCPLPEPSILNDGR+WKERV  SS+R+  
Subjt:  MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERV--SSIRKLP

Query:  DLPVMKEG
        DL ++++G
Subjt:  DLPVMKEG

Sequences

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CDS sequence

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ATGGCGTCGAGTCGAAGAAAGGGTGTCGGTAAAGCCGTTGTGGATGTTGCCTCGCACTGGAAGGAAGGGGTTTTCTTTGTGGTTGTGGGTTTTTTTGTTCTTTTGTCCTT
GTGGATTTCTTTGAAAGAAGGGGAAGAAGAAAAGGAAGAGAGTTGGTTTGTTGTGGGTTTGCTTTGGAAGAAGAAGAAGAAAGGGAAGGGGGTGGGTTCAGTGATTTTGA
AGAAGAAGAAAAGGGAGGAGGTGGTGGTGTCAACAGTCATCGACGGGAAGGGGAAGGGTGGACGGGAAAGGGAAGCGAAAGGGGAAGGGGAAAAGGAAGGGAAAGGAGAG
GGGGAATTGATTGGGGGAAGAGAGAGAAAGACTACGAAGCCAATCCATTCAATTTTACTACAAAAAGACACCGAACAAGAATCAAAACCAAAATCCAAAAACCCCATTCG
TCAAGCAAAGCTACAGCTTCCTCCTCCAAAACAAAGCTATCCTTTCATTTTCCCCAACCCAATTTCTTCTTCTTCTTGTCTCTCTCTCCATCTCTCTTCAATTCAAGAGA
GAGAAGCGACTTCTGTTTCTCTATTGGACCAGTCGAGATCCGATCCTTCCTGGATGGTGGGCATTTTTTCGAGGTTTTCTTCTAGCAGAACAGGGCATCGACGAGCTCAA
AGTGCTCTTGATGGCAGAGAAGGACTGCCTCCAAACCCAGAGAGCACTGGTGTTAGTGCTACCTCTGCTGCTGCTGCTGCTCATGGAATTGAAGTAGCAGTGGAGTTCAA
GCCTGTTGAACACCCGATTGAGCCTCTCGACAACGACCGGCCAATTCAGTGCCCGTTGCCCGAACCTTCTATTCTGAATGACGGAAGAATATGGAAGGAACGAGTATCGA
GTATACGAAAACTGCCAGATTTGCCTGTTATGAAAGAAGGTGAAGTCGGTGAGACAAGACCACGGTACTACTTTGACGTTGAGGTCCCGAAAGCCGAAGAAGAATTTTCG
GGCATTCGAGAGTCGGGATCATTGATTTGGCATTGGAATGGAAGATACAGGATTATTAATGTTAGGTAA

mRNA sequence

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Protein sequence

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MASSRRKGVGKAVVDVASHWKEGVFFVVVGFFVLLSLWISLKEGEEEKEESWFVVGLLWKKKKKGKGVGSVILKKKKREEVVVSTVIDGKGKGGREREAKGEGEKEGKGE
GELIGGRERKTTKPIHSILLQKDTEQESKPKSKNPIRQAKLQLPPPKQSYPFIFPNPISSSSCLSLHLSSIQEREATSVSLLDQSRSDPSWMVGIFSRFSSSRTGHRRAQ
SALDGREGLPPNPESTGVSATSAAAAAHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEGEVGETRPRYYFDVEVPKAEEEFS
GIRESGSLIWHWNGRYRIINVR

Lag0017253 (gene) of Sponge gourd (AG-4) v1 genome