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Lag0017277 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017277
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr5:1663349..1663774
RNA-Seq ExpressionLag0017277
SyntenyLag0017277
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577729.1 Lysine-specific demethylase, partial [Cucurbita argyrosperma subsp. sororia]9.8e-0839.34Show/hide
Query:  MASFFPTGKVPPVGPVIRWAPPKLYRKLPANFFWHPPPTFSCYATLRSLTRPRASTATRLRVFRESHELYGRRWEGKKSILPPEFARKVAEKGGEIGLLC
        MASFFP  KV PVGPVIRWA   +                                                R++GKKSILPPEF RKV EK  ++  L 
Subjt:  MASFFPTGKVPPVGPVIRWAPPKLYRKLPANFFWHPPPTFSCYATLRSLTRPRASTATRLRVFRESHELYGRRWEGKKSILPPEFARKVAEKGGEIGLLC

Query:  EHNKLMKVGGNGSSAG-GPLQP
        + N+L KVGGN SSA  GPL P
Subjt:  EHNKLMKVGGNGSSAG-GPLQP

KAG6596721.1 hypothetical protein SDJN03_09901, partial [Cucurbita argyrosperma subsp. sororia]7.0e-0645.83Show/hide
Query:  MASFFPTGKVPPVGPVIRWAPPKLYRKLPANFFWHPPPTFSCYATLRSLTRPRASTA-TRLRVFRESHELYGRRWEGKKSILPPEFARKVAEKGGE
        +AS FPTGKV PV PVIR                     FSCYATL S+T  RA      L  F ES          +KSILPP+  RKVAEKGGE
Subjt:  MASFFPTGKVPPVGPVIRWAPPKLYRKLPANFFWHPPPTFSCYATLRSLTRPRASTA-TRLRVFRESHELYGRRWEGKKSILPPEFARKVAEKGGE

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGTTCTTTCCGACGGGTAAAGTTCCCCCGGTGGGACCGGTCATCCGGTGGGCGCCTCCGAAACTGTACCGTAAACTGCCAGCTAATTTCTTCTGGCACCCACC
GCCCACGTTCAGCTGCTACGCCACGTTACGCTCTCTCACTCGCCCACGCGCCTCCACCGCCACGCGCCTACGTGTGTTTCGAGAATCTCACGAACTTTACGGAAGGCGTT
GGGAAGGGAAAAAGTCCATTTTGCCCCCGGAATTTGCGAGGAAAGTGGCGGAAAAAGGTGGAGAAATTGGACTTTTGTGTGAGCATAACAAACTGATGAAGGTGGGTGGA
AATGGATCCTCTGCGGGTGGGCCGCTTCAACCTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGTTCTTTCCGACGGGTAAAGTTCCCCCGGTGGGACCGGTCATCCGGTGGGCGCCTCCGAAACTGTACCGTAAACTGCCAGCTAATTTCTTCTGGCACCCACC
GCCCACGTTCAGCTGCTACGCCACGTTACGCTCTCTCACTCGCCCACGCGCCTCCACCGCCACGCGCCTACGTGTGTTTCGAGAATCTCACGAACTTTACGGAAGGCGTT
GGGAAGGGAAAAAGTCCATTTTGCCCCCGGAATTTGCGAGGAAAGTGGCGGAAAAAGGTGGAGAAATTGGACTTTTGTGTGAGCATAACAAACTGATGAAGGTGGGTGGA
AATGGATCCTCTGCGGGTGGGCCGCTTCAACCTTCGTAA
Protein sequenceShow/hide protein sequence
MASFFPTGKVPPVGPVIRWAPPKLYRKLPANFFWHPPPTFSCYATLRSLTRPRASTATRLRVFRESHELYGRRWEGKKSILPPEFARKVAEKGGEIGLLCEHNKLMKVGG
NGSSAGGPLQPS