CuGenDBv2

Gene ID	Lag0017283
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	binding partner of ACD11 1-like
Genome location	chr5:1722463..1727439
RNA-Seq Expression	Lag0017283
Synteny	Lag0017283
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR034360 - Vip1-like, RNA recognition motif, plant IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0053025.1 binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa]

1.8e-133

94.29

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

XP_008448657.1 PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo]

6.1e-134

94.64

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Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MS+KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

XP_008448658.1 PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]

1.8e-133

94.29

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

XP_038906357.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]

1.2e-134

95.71

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Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MS+KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSESERSQ AYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG KAPGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

XP_038906358.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]

3.6e-134

95.36

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSESERSQ AYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG KAPGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L545 RRM domain-containing protein

5.6e-133

93.57

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MS+KTV+VSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVAD FN+VAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

A0A1S3BK74 binding partner of ACD11 1 isoform X2

8.6e-134

94.29

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

A0A1S3BK81 binding partner of ACD11 1 isoform X1

3.0e-134

94.64

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MS+KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

A0A5A7UH68 Binding partner of ACD11 1 isoform X2

8.6e-134

94.29

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ

A0A6J1CV14 binding partner of ACD11 1-like isoform X1

1.5e-130

92.83

Show/hide

Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA
        MS+KTVKVSNVSLGAS+RDV+EFFSFSGDIEYLEMQSESERSQTAYVTFKD+QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPP A G  APGAA
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQ
        IM NR+VMSGTSWVADAFNKVAKAAGEVGQKTKEK V SEEEQ+KKTVEDFAQVHLSESPKAA+APPEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQ

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

4.7e-04

25.42

Show/hide

Query:  VKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFR
        V V+N+S   +E+ + +FFSF G +  +  +   E +QTA + F+     +TA+LL  A +    + IT          A +     GA    AA    +
Subjt:  VKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFR

Query:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEK
            ++S +L++G+ L    L  +   D+ + +SS        L+  +     ++     V++K  EVD KF +S+K
Subjt:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEK

Q9LFD5 Binding partner of ACD11 1

2.2e-70

57.3

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Query:  AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA
        A  V++VKV N+S GA+E D++EFFSFSG++E +++QS      +AYVTFK++QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   +
Subjt:  AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA

Query:  -AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG
         AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG
Subjt:  -AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG

Query:  TAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        +A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  TAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

6.6e-94

67.84

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Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP-PPAPGAKAPGA
        M++ TVKVSNVSLGA++RD++EFFSFSGDI YLE QSE+ER++ AYVTFKD QGAETAVLLSGATIVD SV +++ P+Y+L PEA A   P    K+P A
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP-PPAPGAKAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT
         +S  RKAEDVVS MLAKGFILGKDA+  AK+ DEKHQL+STASAKVA+ DKKIGFT+KI+ GT +V +KVREVDQK+QVSEKTKSA A AE+ VSNAG+
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT

Query:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQEYK
        AIMKNRYV++G +WV  AFNKVAKAA EVGQK KEKV ++EEE ++K V++FA+VHLSESPKAAS+  E ++  K   + E K
Subjt:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQEYK

AT5G16840.1 binding partner of acd11 1

1.6e-71

57.3

Show/hide

Query:  AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA
        A  V++VKV N+S GA+E D++EFFSFSG++E +++QS      +AYVTFK++QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   +
Subjt:  AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA

Query:  -AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG
         AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG
Subjt:  -AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG

Query:  TAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        +A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  TAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G16840.2 binding partner of acd11 1

1.4e-72

58.05

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Query:  AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA
        A  V++VKV N+S GA+E D++EFFSFSG++E +++QS +E S  AYVTFK++QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   +
Subjt:  AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA

Query:  -AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG
         AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG
Subjt:  -AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG

Query:  TAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        +A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  TAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G16840.3 binding partner of acd11 1

7.1e-72

57.52

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Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-
        M+V++VKV N+S GA+E D++EFFSFSG++E +++QS      +AYVTFK++QGAETAVLLSGA+I D SV I L P Y       +PP AP A+   + 
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG+
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT

Query:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.9e-85

61.77

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Query:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP----PPAPGAKA
        MS+ TVKVSNVSL A+ERD++EFFSFSGDI YLE QSE++ S+ AYVTFKD QGAETAVLL+G+TIVD SV +T+ P+Y+LPP+A A       +  + +
Subjt:  MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP----PPAPGAKA

Query:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS
        P   + S FRKAEDVVSGM++KGF+LGKDA+  AK+ DEKHQL+STASA+V + DK+IGFTEKI+ GT++VS+KV+EVDQKFQV+EKTKSA A AE+ VS
Subjt:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS

Query:  NAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVS--EEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRP--KPEPAQEYKNS
        NAG+AIMKNRYV++G +WV  AFN+V+KAA EVGQK KEKV ++  EEE++KK V++ A VHL+ESPKA     +  + P  K +P +E   S
Subjt:  NAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVS--EEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRP--KPEPAQEYKNS

Sequences

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CDS sequence

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ATGGTAATTTTGGACCACTTCGATGTACAAGGAGCCGATGAGAACAACCGGATAGGAATCAGACTGGATGATGGACCTCGAGACGAACGAGCTAGTGGATCAGGCCAAGA
TCGAATGAACGATCTAGTGGATCAGGCCAAGACCAAAGGGCTAAGATTGAAGACAGAACCTGTAAGTTGCAACGTGGCTCGTCACAGTTTCCGTGCAGAAGGCCGTCCCG
TTATGGAAATTCCCCCCGTCCTGTTAACGTTCCGTTTCAAATCCAAGACGGTTTCAGTTTTCCGGCGATCGTCGGTTGATTCCGTCCCCGTTCCGGCGATTTTATCTTCG
TCATTTCCAGCGATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATGTCCAGGAGTTTTTTTCCTTTTCTGGTGACATAGAATATCT
GGAAATGCAAAGTGAAAGTGAACGGTCTCAAACTGCTTATGTAACCTTTAAGGATTCACAAGGAGCAGAGACTGCTGTTCTTCTGTCCGGAGCAACTATAGTGGATCTCT
CTGTCAACATCACTCTGTGTCCTGAGTATGAGCTCCCTCCAGAAGCTACTGCACCACCCCCTGCCCCAGGAGCTAAAGCACCTGGTGCTGCCGAATCTGCCTTCCGGAAA
GCAGAAGATGTGGTTAGCGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGATGCACTGAACTCTGCTAAGGCATTTGATGAGAAACACCAGTTATCTTCTACGGCCTC
AGCCAAAGTTGCTACATTGGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACATCGTTGGTGAGTGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTT
CCGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCAATGCCGGAACTGCCATCATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTGCCGAT
GCTTTCAATAAGGTAGCTAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCCGAAGAAGAACAGAGAAAGAAGACGGTCGAAGATTTTGCTCA
GGTTCATCTCTCGGAATCCCCTAAAGCAGCATCTGCACCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCGGCTCAAGAATACAAGAACAGCAGATTTTTCCATATTG
AGAACAAATTCTGCTCTTTCTACTATGCTATGTATCAGTGCAGTTCTGGCTAG

mRNA sequence

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Protein sequence

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MVILDHFDVQGADENNRIGIRLDDGPRDERASGSGQDRMNDLVDQAKTKGLRLKTEPVSCNVARHSFRAEGRPVMEIPPVLLTFRFKSKTVSVFRRSSVDSVPVPAILSS
SFPAMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRK
AEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVAD
AFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQEYKNSRFFHIENKFCSFYYAMYQCSSG

Lag0017283 (gene) of Sponge gourd (AG-4) v1 genome