; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017311 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017311
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:2033312..2034706
RNA-Seq ExpressionLag0017311
SyntenyLag0017311
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48431.1 hypothetical protein EZV62_027725 [Acer yangbiense]6.3e-3132.79Show/hide
Query:  RIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDG
        RIW ++G V +E    N +   F+   D+ R+  GGPWS+D A+I+ +EP+    +  L F SV FW+H   +P +   +     LG+ IGE    +   
Subjt:  RIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDG

Query:  NDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCV---EDGLNESSERSYGVSLRETNASKGFYKNWWNGPT
        +    G  +RV+V + V +PL+R   V +     +T +PI YE+LP FC+ CG +GH+  +C    EDGL E S   YG  LR T     + +  W G  
Subjt:  NDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCV---EDGLNESSERSYGVSLRETNASKGFYKNWWNGPT

Query:  NSDMRGRGRGRFGRG-WRGGGKKDWRNTEQKTEARCAENQAGEESIG
        + DMR +G  R         G+ + R+  +   AR  E  +G+++ G
Subjt:  NSDMRGRGRGRFGRG-WRGGGKKDWRNTEQKTEARCAENQAGEESIG

TXG64850.1 hypothetical protein EZV62_011844 [Acer yangbiense]9.1e-3035.94Show/hide
Query:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET
        M +IW + G V +E    N F   F    D++R+ +GGPWS+D AIIIFDEP     + +L F  V FW+  + LP +C   +  + LG+ IGE    ++
Subjt:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET

Query:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVED----GLNESSERSYGVSLRETNASK
               G  +RV+V I V +PL+R   V +      + + + YE+L D+C+ CGRLGH+  +CVE      L+  + R  GV LR  +  K
Subjt:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVED----GLNESSERSYGVSLRETNASK

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.3e-3240.8Show/hide
Query:  AVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGV
        A  V+  G N F+  F +  D+ RI + GPW++D A+II D P + +   D++F++VS W+HF+ L   C  +  A  LGN+IG FE  E++ N+   G 
Subjt:  AVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGV

Query:  SLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSER-SYGVSLR
         LRV+V+ +V +PL RG  + +    G  WIPI YE+LPDF Y+CGRL H+ +DC +  ++  S+   YG  LR
Subjt:  SLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSER-SYGVSLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.7e-3234.04Show/hide
Query:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET
        M  +W +  + R E  G N ++  F+   +K R+   GPW+++ ++++   P A +   D+ F   +FWI  + +P  C   + A  LG  +G+ E  E 
Subjt:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET

Query:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGK-TWIPITYEKLPDFCYYCGRLGHVEQDCVEDG--LNESSERSYGVSLRETNASKGFYKNWWNG
        DG D   G  +RV+VKI+V +PL+RG  +K+ +  GK  W P+ YEKLPDFCY CG++GH  ++C +    +  +S   YG  LR T   K         
Subjt:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGK-TWIPITYEKLPDFCYYCGRLGHVEQDCVEDG--LNESSERSYGVSLRETNASKGFYKNWWNG

Query:  PTNSDMRGRGRGRFGRGWR----GGGKKDWRNTEQ
            ++  RG GRFGRG +     GG+ DWR  ++
Subjt:  PTNSDMRGRGRGRFGRGWR----GGGKKDWRNTEQ

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.6e-3438.66Show/hide
Query:  WGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGND
        W +E  + VES G+N F+  F ++ D  R+ K GPW +D A+I+  +P ++  + +LEF  V+FWIH + LP     +  A+ LGN+IG F   + +   
Subjt:  WGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGND

Query:  KMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDC------VEDGLNESSERSYGVSLRETNASKGFYK
           G SLR++V I++ +PL+RG  + I    G  WIPI YE+LPDFCY+CG +GH   DC       +D    +SE  YG  LR   +  G  K
Subjt:  KMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDC------VEDGLNESSERSYGVSLRETNASKGFYK

TrEMBL top hitse value%identityAlignment
A0A5C7GUN1 Uncharacterized protein3.0e-3132.79Show/hide
Query:  RIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDG
        RIW ++G V +E    N +   F+   D+ R+  GGPWS+D A+I+ +EP+    +  L F SV FW+H   +P +   +     LG+ IGE    +   
Subjt:  RIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDG

Query:  NDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCV---EDGLNESSERSYGVSLRETNASKGFYKNWWNGPT
        +    G  +RV+V + V +PL+R   V +     +T +PI YE+LP FC+ CG +GH+  +C    EDGL E S   YG  LR T     + +  W G  
Subjt:  NDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCV---EDGLNESSERSYGVSLRETNASKGFYKNWWNGPT

Query:  NSDMRGRGRGRFGRG-WRGGGKKDWRNTEQKTEARCAENQAGEESIG
        + DMR +G  R         G+ + R+  +   AR  E  +G+++ G
Subjt:  NSDMRGRGRGRFGRG-WRGGGKKDWRNTEQKTEARCAENQAGEESIG

A0A5C7I6E5 CCHC-type domain-containing protein4.4e-3035.94Show/hide
Query:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET
        M +IW + G V +E    N F   F    D++R+ +GGPWS+D AIIIFDEP     + +L F  V FW+  + LP +C   +  + LG+ IGE    ++
Subjt:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET

Query:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVED----GLNESSERSYGVSLRETNASK
               G  +RV+V I V +PL+R   V +      + + + YE+L D+C+ CGRLGH+  +CVE      L+  + R  GV LR  +  K
Subjt:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVED----GLNESSERSYGVSLRETNASK

A0A6J1BSZ1 uncharacterized protein LOC1110054811.6e-3240.8Show/hide
Query:  AVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGV
        A  V+  G N F+  F +  D+ RI + GPW++D A+II D P + +   D++F++VS W+HF+ L   C  +  A  LGN+IG FE  E++ N+   G 
Subjt:  AVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGV

Query:  SLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSER-SYGVSLR
         LRV+V+ +V +PL RG  + +    G  WIPI YE+LPDF Y+CGRL H+ +DC +  ++  S+   YG  LR
Subjt:  SLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSER-SYGVSLR

A0A6J1D765 uncharacterized protein LOC1110179022.8e-3234.04Show/hide
Query:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET
        M  +W +  + R E  G N ++  F+   +K R+   GPW+++ ++++   P A +   D+ F   +FWI  + +P  C   + A  LG  +G+ E  E 
Subjt:  MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAET

Query:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGK-TWIPITYEKLPDFCYYCGRLGHVEQDCVEDG--LNESSERSYGVSLRETNASKGFYKNWWNG
        DG D   G  +RV+VKI+V +PL+RG  +K+ +  GK  W P+ YEKLPDFCY CG++GH  ++C +    +  +S   YG  LR T   K         
Subjt:  DGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGK-TWIPITYEKLPDFCYYCGRLGHVEQDCVEDG--LNESSERSYGVSLRETNASKGFYKNWWNG

Query:  PTNSDMRGRGRGRFGRGWR----GGGKKDWRNTEQ
            ++  RG GRFGRG +     GG+ DWR  ++
Subjt:  PTNSDMRGRGRGRFGRGWR----GGGKKDWRNTEQ

A0A6J1DU55 uncharacterized protein LOC1110231357.7e-3538.66Show/hide
Query:  WGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGND
        W +E  + VES G+N F+  F ++ D  R+ K GPW +D A+I+  +P ++  + +LEF  V+FWIH + LP     +  A+ LGN+IG F   + +   
Subjt:  WGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGND

Query:  KMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDC------VEDGLNESSERSYGVSLRETNASKGFYK
           G SLR++V I++ +PL+RG  + I    G  WIPI YE+LPDFCY+CG +GH   DC       +D    +SE  YG  LR   +  G  K
Subjt:  KMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDC------VEDGLNESSERSYGVSLRETNASKGFYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding2.0e-0623.61Show/hide
Query:  FRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLK
        F+ +     I + GPWS++D + +    +      D EFK + FWI    +P      +   ++G  +G F   ET+                       
Subjt:  FRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLK

Query:  RGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDG
         G +V +        +   YEKL +FC  CG L H   +C   G
Subjt:  RGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAGAATTTGGGGCATAGAGGGAGCGGTCAGAGTTGAAAGTGCAGGGAGAAATACCTTTATATGCAAGTTTAGAAAGCAAAGGGACAAAATCAGAATAACCAAAGG
AGGACCGTGGAGCTATGATGATGCTATAATTATATTTGATGAACCAAAAGCTAACAGCTGCGTGGAAGACCTCGAATTCAAGTCAGTATCTTTTTGGATTCACTTTTACA
AATTACCGCGTGTTTGTTTTTGCAGGAAGTACGCCTTAGCTTTGGGCAACTCGATTGGAGAATTTGAAGCGGCAGAAACTGATGGAAATGACAAAATGAAGGGTGTGTCG
CTTAGAGTTAAGGTGAAGATAAATGTTAAAGAACCTCTCAAAAGGGGAACCAACGTCAAAATTGGATCGATGGCCGGGAAAACTTGGATTCCGATAACTTACGAAAAACT
ACCCGATTTCTGTTACTACTGCGGCAGACTCGGCCATGTAGAACAGGACTGTGTAGAAGATGGGTTGAATGAAAGCTCAGAAAGAAGTTATGGAGTTAGTCTAAGAGAAA
CAAATGCTAGTAAAGGTTTCTATAAAAACTGGTGGAATGGACCAACGAACTCTGATATGAGAGGAAGAGGCAGAGGTAGATTCGGAAGAGGATGGCGAGGTGGAGGCAAA
AAAGATTGGCGAAATACAGAACAAAAGACAGAGGCAAGGTGTGCTGAAAATCAGGCTGGTGAAGAAAGTATAGGCAAGCACGGTGAGTCCAAGAAGAAACGGTGGCCGGA
AGCATACCAGACACCGGAAAAGGAAGACCGGAACAGGGAAAAGGAAGAAACGGTGGCCAAACGCTGCAGTTCAGAACGATGTGACAACTATACTGACAATTCTGAATCTG
GGAATTTTCAGGGGTCAGAGAATACAGCAGGAAAAATGGATTGTAACAGAGGAAAAGAGCCGTTGAAGGAAAAAGACAAAGATAATAATAAATTGACAGGCTTGGGCCCA
TTTCAAAATAATACCTTGGAAGGTCCGACAAAAAGGACTCCAAGCCCACCTATTCATCAAACGGAAGGCAGGGAAGAAAAGGGTAAAGAAATAGCCAGAGGTACCAAAGA
AAGTAAAAAAGAAGGTCAGATTAAGATGGGCGGAAAAGGAAACAATGAAAAATCAACTTTAAGCCCAGGGAAAGGAAAAAAGGATGACAGAATGAAATGGAAAAGAATGG
CTAGAGAAAAGGATATACAGATAATGGAAATTCAGAGTATAAAATCAGATACCGGAAAAAGGAAAGCTGAAGACACTCTTGATGAGGAGATAACCAAAAGGAACAAAAAA
GACCACGAAAGTTACTTCAATGCGTTTGAAGGGATATCGGCGGAGGCTGGTTTCCAGCCCCGCCGGACGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAGAATTTGGGGCATAGAGGGAGCGGTCAGAGTTGAAAGTGCAGGGAGAAATACCTTTATATGCAAGTTTAGAAAGCAAAGGGACAAAATCAGAATAACCAAAGG
AGGACCGTGGAGCTATGATGATGCTATAATTATATTTGATGAACCAAAAGCTAACAGCTGCGTGGAAGACCTCGAATTCAAGTCAGTATCTTTTTGGATTCACTTTTACA
AATTACCGCGTGTTTGTTTTTGCAGGAAGTACGCCTTAGCTTTGGGCAACTCGATTGGAGAATTTGAAGCGGCAGAAACTGATGGAAATGACAAAATGAAGGGTGTGTCG
CTTAGAGTTAAGGTGAAGATAAATGTTAAAGAACCTCTCAAAAGGGGAACCAACGTCAAAATTGGATCGATGGCCGGGAAAACTTGGATTCCGATAACTTACGAAAAACT
ACCCGATTTCTGTTACTACTGCGGCAGACTCGGCCATGTAGAACAGGACTGTGTAGAAGATGGGTTGAATGAAAGCTCAGAAAGAAGTTATGGAGTTAGTCTAAGAGAAA
CAAATGCTAGTAAAGGTTTCTATAAAAACTGGTGGAATGGACCAACGAACTCTGATATGAGAGGAAGAGGCAGAGGTAGATTCGGAAGAGGATGGCGAGGTGGAGGCAAA
AAAGATTGGCGAAATACAGAACAAAAGACAGAGGCAAGGTGTGCTGAAAATCAGGCTGGTGAAGAAAGTATAGGCAAGCACGGTGAGTCCAAGAAGAAACGGTGGCCGGA
AGCATACCAGACACCGGAAAAGGAAGACCGGAACAGGGAAAAGGAAGAAACGGTGGCCAAACGCTGCAGTTCAGAACGATGTGACAACTATACTGACAATTCTGAATCTG
GGAATTTTCAGGGGTCAGAGAATACAGCAGGAAAAATGGATTGTAACAGAGGAAAAGAGCCGTTGAAGGAAAAAGACAAAGATAATAATAAATTGACAGGCTTGGGCCCA
TTTCAAAATAATACCTTGGAAGGTCCGACAAAAAGGACTCCAAGCCCACCTATTCATCAAACGGAAGGCAGGGAAGAAAAGGGTAAAGAAATAGCCAGAGGTACCAAAGA
AAGTAAAAAAGAAGGTCAGATTAAGATGGGCGGAAAAGGAAACAATGAAAAATCAACTTTAAGCCCAGGGAAAGGAAAAAAGGATGACAGAATGAAATGGAAAAGAATGG
CTAGAGAAAAGGATATACAGATAATGGAAATTCAGAGTATAAAATCAGATACCGGAAAAAGGAAAGCTGAAGACACTCTTGATGAGGAGATAACCAAAAGGAACAAAAAA
GACCACGAAAGTTACTTCAATGCGTTTGAAGGGATATCGGCGGAGGCTGGTTTCCAGCCCCGCCGGACGCCATGA
Protein sequenceShow/hide protein sequence
MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVS
LRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSERSYGVSLRETNASKGFYKNWWNGPTNSDMRGRGRGRFGRGWRGGGK
KDWRNTEQKTEARCAENQAGEESIGKHGESKKKRWPEAYQTPEKEDRNREKEETVAKRCSSERCDNYTDNSESGNFQGSENTAGKMDCNRGKEPLKEKDKDNNKLTGLGP
FQNNTLEGPTKRTPSPPIHQTEGREEKGKEIARGTKESKKEGQIKMGGKGNNEKSTLSPGKGKKDDRMKWKRMAREKDIQIMEIQSIKSDTGKRKAEDTLDEEITKRNKK
DHESYFNAFEGISAEAGFQPRRTP