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Lag0017334 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017334
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:2354859..2358092
RNA-Seq ExpressionLag0017334
SyntenyLag0017334
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4367405.1 hypothetical protein F8388_025823 [Cannabis sativa]1.6e-0450Show/hide
Query:  GGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLM
        G W+ES +RAHF+E D E ILR+P      ED+++WH+ KHG + M
Subjt:  GGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLM

XP_015384077.1 uncharacterized protein LOC107176301 [Citrus sinensis]2.8e-0446.3Show/hide
Query:  STVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF
        +TV++L  A   WNE+ L+ HF E D EA+L+I L     ED L+WHF+K G +
Subjt:  STVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF

XP_022149385.1 uncharacterized protein LOC111017816 [Momordica charantia]6.6e-0649.09Show/hide
Query:  TSTVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF
        +S VS L +ASGGWNE ++R  FDE +   ILRIP+  D   D  IWH++  G F
Subjt:  TSTVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF

XP_024162452.1 uncharacterized protein LOC112169623 [Rosa chinensis]5.1e-0628.33Show/hide
Query:  VSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLMCVLSMSLWRTVGIFLECPVVETVEIYGSSQLTTSVPSMMVAGVP--
        V +L      WNES +R+ F   D EAIL IPL     EDRL WHFE+ G F +       +      L   V+      G      +   +   G P  
Subjt:  VSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLMCVLSMSLWRTVGIFLECPVVETVEIYGSSQLTTSVPSMMVAGVP--

Query:  SRPDTGEARGGCVLRGLRDVSEVGRLMDDVRMVLHPWDINKVVFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVL
           D    +         + S +GRL +D+   L     +++V   R+ N+ AHALA  A +     +    PS I  V+
Subjt:  SRPDTGEARGGCVLRGLRDVSEVGRLMDDVRMVLHPWDINKVVFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVL

XP_042983230.1 uncharacterized protein LOC122312638 [Carya illinoinensis]2.8e-0428.72Show/hide
Query:  GW---NESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLMCVLSMSLWRTVGIFLECP-VVETVEIYGSSQLTTSVPSMMVAGVPSRPDTGE
        GW    +S+L+A+FD + CE+       R LG   +I   E       C         V +F  C    E   ++ +  L   +      G+ +    G+
Subjt:  GW---NESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLMCVLSMSLWRTVGIFLECP-VVETVEIYGSSQLTTSVPSMMVAGVPSRPDTGE

Query:  ARG--GCVLRGLRDVSEVGRLMDDVRMVLHPWDINKVVFSPRQGNRVAHALASLAFSY-VDRVWLEEGPSEISDVLRGDAVSSLTGVV
        A+G    V RG +D S  G L++ ++  ++ +    V F   +GN VAH LA +A +Y  DR W+EEGP EI + +  D +  +T  V
Subjt:  ARG--GCVLRGLRDVSEVGRLMDDVRMVLHPWDINKVVFSPRQGNRVAHALASLAFSY-VDRVWLEEGPSEISDVLRGDAVSSLTGVV

TrEMBL top hitse value%identityAlignment
A0A6J1D5K1 uncharacterized protein LOC1110178163.2e-0649.09Show/hide
Query:  TSTVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF
        +S VS L +ASGGWNE ++R  FDE +   ILRIP+  D   D  IWH++  G F
Subjt:  TSTVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF

A0A7J6F9V7 CCHC-type domain-containing protein7.9e-0550Show/hide
Query:  GGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLM
        G W+ES +RAHF+E D E ILR+P      ED+++WH+ KHG + M
Subjt:  GGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAFLM

A0A803NG60 Uncharacterized protein3.5e-0548.08Show/hide
Query:  VSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF
        V DL  A G W+ES +RAHF+E D + ILR+P      ED+++WH+ KHG +
Subjt:  VSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF

A0A803NHI3 Uncharacterized protein3.9e-0445.61Show/hide
Query:  SATSTVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF
        SA+  V DL    GGWN   L  HF + D +AIL IP+   +G DR  WHF   GA+
Subjt:  SATSTVSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF

A0A803Q154 Uncharacterized protein2.3e-0444.23Show/hide
Query:  VSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF
        V DL  A GGW+E  ++AHF+E D E IL +P      ED+++WH+ K+G +
Subjt:  VSDLFAASGGWNESVLRAHFDESDCEAILRIPLRRDLGEDRLIWHFEKHGAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCCTGGGTTTTCGTGATATGGACTCTTTAACCAAGCCCTGTTGGCTAAGCAGTGTGGCGTATCCTGCAGGATCCGTCTTCTCTTTTGTTTCGGTACTGAGGGT
CGTTATTTTCCCCATCAGGTTCTTGGAGGCAGGTTTGGTTCGCGACCGTCTTTGTGTGGCGCAGTTTGCTATAGGGGCGGGAGCTCTTGGTTCGAGGATGTCGGTGGAGG
ATAGTCGGTCCCTCGCTTCCGCTACTAGTACGGTAAGTGATCTATTTGCTGCGTCTGGGGGATGGAACGAGTCTGTGCTCAGAGCCCATTTTGATGAGTCAGACTGTGAG
GCCATCCTGAGAATCCCATTACGGCGTGATCTGGGAGAGGATCGCTTAATTTGGCACTTTGAGAAGCATGGGGCCTTTCTTATGTGTGTTCTGTCGATGAGTTTGTGGAG
GACCGTCGGCATCTTTCTGGAGTGCCCTGTGGTTGAGACGGTCGAGATTTATGGGTCTTCTCAACTGACTACCTCAGTTCCTTCCATGATGGTGGCAGGCGTTCCTAGCA
GGCCTGATACAGGGGAGGCTAGGGGTGGCTGTGTACTACGGGGGCTGAGGGATGTGTCGGAGGTAGGGCGGTTGATGGATGATGTGCGAATGGTCCTCCATCCTTGGGAC
ATCAACAAGGTTGTGTTTTCGCCTCGTCAGGGAAACAGGGTGGCGCATGCTCTGGCTAGCTTGGCCTTTTCTTATGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGA
GATTTCTGATGTCCTGAGGGGTGATGCTGTTTCATCTTTAACTGGTGTAGTACATATGCCTGTGTGGGGAGCTAATCTGAGTATTGATGCTTTGTGCGTTAGTTATTTTA
TTTTCGTGGTTCTAGCTTGGTTTATCTTTGTGGTTGGACGCTTGGGTTTTGCCCTGGTGGTGGGTTTGGTTGTGGGATTGTTGGTGATTTCTCTGTATGTGCAGTTGTGC
TGTCCTTTGCCTGGGATTGAGTATGCTTCTCCTAGGCAAACGCGTAGCATTTGGTGTGCAGAGTACTGTTATGATAAGTTTCCATCTTCTAGACCTGCTTTCAGGGCCCA
TTACTCTGCTTGTGTTGGTGGGGGATTGCAAAAGCTGATGCTTGAGGGCTTGCTCCCTCCTTCATGTTGTTTTGAGCGGGCCTGTGGGAGGTCCAAGGCGCCTGCTAACC
AAAGTATGGCGATGTCTTTGCCGTTCCTTGTGAAGTACTGGAGAGGCTTGTGTTCATGGTTTGTGGTGCTTGATGGTGAATATGATGACAACGAGCTGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCCTGGGTTTTCGTGATATGGACTCTTTAACCAAGCCCTGTTGGCTAAGCAGTGTGGCGTATCCTGCAGGATCCGTCTTCTCTTTTGTTTCGGTACTGAGGGT
CGTTATTTTCCCCATCAGGTTCTTGGAGGCAGGTTTGGTTCGCGACCGTCTTTGTGTGGCGCAGTTTGCTATAGGGGCGGGAGCTCTTGGTTCGAGGATGTCGGTGGAGG
ATAGTCGGTCCCTCGCTTCCGCTACTAGTACGGTAAGTGATCTATTTGCTGCGTCTGGGGGATGGAACGAGTCTGTGCTCAGAGCCCATTTTGATGAGTCAGACTGTGAG
GCCATCCTGAGAATCCCATTACGGCGTGATCTGGGAGAGGATCGCTTAATTTGGCACTTTGAGAAGCATGGGGCCTTTCTTATGTGTGTTCTGTCGATGAGTTTGTGGAG
GACCGTCGGCATCTTTCTGGAGTGCCCTGTGGTTGAGACGGTCGAGATTTATGGGTCTTCTCAACTGACTACCTCAGTTCCTTCCATGATGGTGGCAGGCGTTCCTAGCA
GGCCTGATACAGGGGAGGCTAGGGGTGGCTGTGTACTACGGGGGCTGAGGGATGTGTCGGAGGTAGGGCGGTTGATGGATGATGTGCGAATGGTCCTCCATCCTTGGGAC
ATCAACAAGGTTGTGTTTTCGCCTCGTCAGGGAAACAGGGTGGCGCATGCTCTGGCTAGCTTGGCCTTTTCTTATGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGA
GATTTCTGATGTCCTGAGGGGTGATGCTGTTTCATCTTTAACTGGTGTAGTACATATGCCTGTGTGGGGAGCTAATCTGAGTATTGATGCTTTGTGCGTTAGTTATTTTA
TTTTCGTGGTTCTAGCTTGGTTTATCTTTGTGGTTGGACGCTTGGGTTTTGCCCTGGTGGTGGGTTTGGTTGTGGGATTGTTGGTGATTTCTCTGTATGTGCAGTTGTGC
TGTCCTTTGCCTGGGATTGAGTATGCTTCTCCTAGGCAAACGCGTAGCATTTGGTGTGCAGAGTACTGTTATGATAAGTTTCCATCTTCTAGACCTGCTTTCAGGGCCCA
TTACTCTGCTTGTGTTGGTGGGGGATTGCAAAAGCTGATGCTTGAGGGCTTGCTCCCTCCTTCATGTTGTTTTGAGCGGGCCTGTGGGAGGTCCAAGGCGCCTGCTAACC
AAAGTATGGCGATGTCTTTGCCGTTCCTTGTGAAGTACTGGAGAGGCTTGTGTTCATGGTTTGTGGTGCTTGATGGTGAATATGATGACAACGAGCTGCGATAG
Protein sequenceShow/hide protein sequence
MGGLGFRDMDSLTKPCWLSSVAYPAGSVFSFVSVLRVVIFPIRFLEAGLVRDRLCVAQFAIGAGALGSRMSVEDSRSLASATSTVSDLFAASGGWNESVLRAHFDESDCE
AILRIPLRRDLGEDRLIWHFEKHGAFLMCVLSMSLWRTVGIFLECPVVETVEIYGSSQLTTSVPSMMVAGVPSRPDTGEARGGCVLRGLRDVSEVGRLMDDVRMVLHPWD
INKVVFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLRGDAVSSLTGVVHMPVWGANLSIDALCVSYFIFVVLAWFIFVVGRLGFALVVGLVVGLLVISLYVQLC
CPLPGIEYASPRQTRSIWCAEYCYDKFPSSRPAFRAHYSACVGGGLQKLMLEGLLPPSCCFERACGRSKAPANQSMAMSLPFLVKYWRGLCSWFVVLDGEYDDNELR