; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017384 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017384
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationchr5:3039708..3041589
RNA-Seq ExpressionLag0017384
SyntenyLag0017384
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150170.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus]1.1e-6391.3Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+SNDSWINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFV+AILCF+ M+EDDDY+MF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

XP_022155500.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]6.8e-6696.4Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLPGSLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF GSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF
         GIIGWGALAMDLSSF+VFVIAILCFLWMNEDDD YTMF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF

XP_022923424.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata]6.4e-6493.48Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S+DSWINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

XP_022965211.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima]8.3e-6493.48Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S DSWINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

XP_038906097.1 vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida]5.8e-6594.2Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+SN+SWINATKFLTGAST+GSIAIPIILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFVIAILCF+ M+EDDDYTMF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

TrEMBL top hitse value%identityAlignment
A0A0A0L5B3 Uncharacterized protein5.3e-6491.3Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+SNDSWINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFV+AILCF+ M+EDDDY+MF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

A0A1S3BJT4 vacuolar protein sorting-associated protein 55 homolog9.0e-6491.3Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+SNDSWINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFV+AILCF+ M+EDDDY+MF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

A0A6J1DML0 vacuolar protein sorting-associated protein 55 homolog3.3e-6696.4Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLPGSLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF GSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF
         GIIGWGALAMDLSSF+VFVIAILCFLWMNEDDD YTMF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF

A0A6J1E6D1 vacuolar protein sorting-associated protein 55 homolog3.1e-6493.48Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S+DSWINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

A0A6J1HL31 vacuolar protein sorting-associated protein 55 homolog4.0e-6493.48Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S DSWINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
         GIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 551.1e-0728.57Show/hide
Query:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGS--DSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHGGIIGWGALAMD
        K+  L+  ++ G ++ IL+CAL++N++P+  +++++L P+P  +F AG+   +S   ++S+++  +   FLTG      IA+P++  H  +IG  +  M 
Subjt:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGS--DSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHGGIIGWGALAMD

Query:  LSSFVVFVIAILCFLW-----MNEDD
        +   ++   +I+ F W      NEDD
Subjt:  LSSFVVFVIAILCFLW-----MNEDD

Q54VP1 Vacuolar protein sorting-associated protein 55 homolog2.2e-0631.25Show/hide
Query:  GIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHGGIIGWGALAMDLSSFVVFVIAILCF
        G++  ILAC + ++ +P++ V  Y L P P +     DS   ++    ++ +   FLTG       AIP+IL H  II   ALA  ++  V     I+ F
Subjt:  GIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHGGIIGWGALAMDLSSFVVFVIAILCF

Query:  LWM----NEDDD
        LW     N++D+
Subjt:  LWM----NEDDD

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog1.7e-5173.88Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++SWINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
         G+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

Q9UUH1 Vacuolar protein sorting-associated protein 552.0e-0729.27Show/hide
Query:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHGGIIGWGALAMDL-
        K+  L+ +++ G ++ IL+CAL+ NW+P+L VI ++L P+P LL    S S     E + + ++  +F  GA+     A+PI+  + G+IG  A  M   
Subjt:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHGGIIGWGALAMDL-

Query:  -SSFVVFVIAILCFLWMNEDDDY
          S +  VI +    ++  ++++
Subjt:  -SSFVVFVIAILCFLWMNEDDDY

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein1.2e-5273.88Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++SWINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
         G+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein1.2e-5273.88Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++SWINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
         G+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein1.2e-5273.88Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++SWINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
         G+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein1.2e-5273.88Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++SWINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
         G+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein1.2e-5273.88Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++SWINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKH

Query:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
         G+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  GGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTTACCAGGTTCTTTGCAAGCCTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCAGGAGGAATTGTAATGCAGATATTGGCATGTGCCTT
GTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTGTTCTTTGCGGGGTCAGATAGTTCTTCACTGTATACTGAATCTAATG
ATAGCTGGATCAATGCGACAAAATTCTTGACGGGAGCTTCGACTATAGGAAGCATCGCCATCCCCATCATTCTGAAGCATGGCGGGATCATCGGCTGGGGGGCTCTGGCA
ATGGACCTCTCATCATTTGTAGTATTCGTGATCGCTATTTTGTGTTTCTTATGGATGAACGAAGATGACGACTACACCATGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTTACCAGGTTCTTTGCAAGCCTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCAGGAGGAATTGTAATGCAGATATTGGCATGTGCCTT
GTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTGTTCTTTGCGGGGTCAGATAGTTCTTCACTGTATACTGAATCTAATG
ATAGCTGGATCAATGCGACAAAATTCTTGACGGGAGCTTCGACTATAGGAAGCATCGCCATCCCCATCATTCTGAAGCATGGCGGGATCATCGGCTGGGGGGCTCTGGCA
ATGGACCTCTCATCATTTGTAGTATTCGTGATCGCTATTTTGTGTTTCTTATGGATGAACGAAGATGACGACTACACCATGTTTTGA
Protein sequenceShow/hide protein sequence
MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHGGIIGWGALA
MDLSSFVVFVIAILCFLWMNEDDDYTMF