; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017425 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017425
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr5:3559630..3566477
RNA-Seq ExpressionLag0017425
SyntenyLag0017425
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG9441971.1 hypothetical protein H6P81_017825 [Aristolochia fimbriata]5.1e-1038.1Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFENK
        LC   +E++DHL + C  A  +W WF    G H+C+P RV D L E    W L +++K++        LW +W ERN R F+ K
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFENK

ONI36148.1 hypothetical protein PRUPE_1G572100 [Prunus persica]2.1e-1137.23Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD
        LC   EE++DHLF+HC F+  +W    R+VG  + +P+   D+L      W LG     + GC   +  W IW+ERN R FE+ K +R+    D
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD

VVA21329.1 Hypothetical predicted protein [Prunus dulcis]1.3e-1037.23Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD
        LC   EE++DHLF+HC F+  +W    R+VG  + + +   D+L      W LG     + GC   +  W IW+ERN R FE+ K +RL    D
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD

XP_010674186.1 PREDICTED: uncharacterized protein LOC104890406 [Beta vulgaris subsp. vulgaris]3.0e-1035.9Show/hide
Query:  EIQEWIALVERLNAVQRREAANSKSDTDESDLEGLCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFR
        EI  W  L+ER+N  QR   A+ +    ESD+  LCL   E+ +HL +HC+F+ Q+W W+    G  +  P  +     +  +  N+    K+   C F 
Subjt:  EIQEWIALVERLNAVQRREAANSKSDTDESDLEGLCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFR

Query:  ATLWHIWLERNARAFEN
         + W IW ERNAR FEN
Subjt:  ATLWHIWLERNARAFEN

XP_016164319.1 uncharacterized protein LOC107606819 [Arachis ipaensis]1.5e-0931.88Show/hide
Query:  DEENHTWNLSLRRGLFEREIQ--EWIALVERLNAVQRREAANSKSDTDESDLEGLCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVE
        D  ++++  S+ +GL    ++   W  L  R+N  +R       +   E  L  LC   +EN+ HLF+ C F+ QVWG +   VGLH+  P  V++   +
Subjt:  DEENHTWNLSLRRGLFEREIQ--EWIALVERLNAVQRREAANSKSDTDESDLEGLCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVE

Query:  GLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFENK
          T ++   + +      F A +W+IWLERN R F+NK
Subjt:  GLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFENK

TrEMBL top hitse value%identityAlignment
A0A251RJG1 zf-RVT domain-containing protein1.0e-1137.23Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD
        LC   EE++DHLF+HC F+  +W    R+VG  + +P+   D+L      W LG     + GC   +  W IW+ERN R FE+ K +R+    D
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD

A0A540M4H0 zf-RVT domain-containing protein1.2e-0937.35Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN
        LC   EE+++H+F+HC +  Q+W    ++V   + +P+   + L     A  +G KAK++ GC   A  W+IWLERN R FE+
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN

A0A5B7C971 zf-RVT domain-containing protein (Fragment)9.4e-1041.05Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRAT----LWHIWLERNARAFENKALRLDSF
        LCLR  E++DHLFIHC F+Q VW       GL + +P+ V++ L+    AW  G + +      ++A+     W +WLERN R FE K L LD F
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRAT----LWHIWLERNARAFENKALRLDSF

A0A5E4F2L4 zf-RVT domain-containing protein6.5e-1137.23Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD
        LC   EE++DHLF+HC F+  +W    R+VG  + + +   D+L      W LG     + GC   +  W IW+ERN R FE+ K +RL    D
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD

M5XJT6 zf-RVT domain-containing protein (Fragment)1.0e-1137.23Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD
        LC   EE++DHLF+HC F+  +W    R+VG  + +P+   D+L      W LG     + GC   +  W IW+ERN R FE+ K +R+    D
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFEN-KALRLDSFCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G45063.1 copper ion binding;electron carriers1.6e-0630.59Show/hide
Query:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFENKA
        LC  ++E   H+F  C F+ +VW +F     +    P R+       L       K   I+  A++A+++HIW ERN R   NK+
Subjt:  LCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFCLPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFENKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGTTCAATTTCTGCTGCAACTTCAACTCAGATAGCAAGTTGGCAACTTCTGCCTCCAAGGCATCTCTATTCTCTGTCATCAAAAGAAGGCTGAAGCAACAGCT
ACCATCTCAGTTATCACATTTGGTCTTTGTGTGGTTGCACGGTTCTGTTTCCTCCAGAGGTGGATTTCCTGCTGCAATCACCAACATGGATGATAATACAAAGACCAGAA
ACAACGATCGATCATTACATTGTCATATGCTAGGGTACAATGCTTGCATCGAGACCCTACCCGAAACTTCATCTTCGGCTACACACATCAGCGTTGTCGGTGACAATCGT
CGTTGGCCATTCTCCTTTTCTTCCACCTTCTTCCTAACTTTGTGGCCGCTGCTATATTCTCCTCCCCACGTCTTCATTTCTTGCCACGAAATTACTAACGACCAATGGTA
CCCTGAAAATCTAGCCTTTGCCATGTCTGATCTCTTTCTTGCTTATTCGTACATGATTTTCGCATTCTTAAGGCTTACAAGTGTATCTCCTCGTAACCTAACCTTCTTTG
CTGCGATTTCTGGAGCTGATAAGCGACTTCTAGAGCTGACGGCGGCGGCAACAAGTGCGATAAGGGAGATCGATGACGACCGGTGCGATGAGGGAGATCGACAAGAGTGG
GCCAGTGACTCCTCAAAACATGATCCAAGTGTTTCCTTAAACAAGGAGCGATCCATCTTTCAATGTTGGGATGAGGAGAACCACACGTGGAATTTAAGCCTTAGAAGAGG
TCTTTTCGAGAGAGAGATTCAAGAGTGGATAGCTTTGGTGGAGAGACTCAACGCTGTGCAAAGAAGGGAGGCAGCAAATAGTAAATCCGACACTGACGAATCTGATTTGG
AAGGATTATGTCTTAGGATGGAAGAAAATTTGGATCACCTCTTTATCCACTGTAAGTTTGCGCAACAAGTCTGGGGTTGGTTTGCTAGGAAGGTTGGTCTTCATTTTTGT
TTGCCTCAGAGAGTGGAAGATTGGTTGGTAGAAGGGCTCACGGCTTGGAACTTGGGGATCAAAGCCAAGATCATTATCGGCTGCGCCTTTAGAGCGACTCTTTGGCACAT
TTGGTTGGAAAGGAATGCTAGAGCTTTCGAGAACAAAGCTCTTAGGCTAGATTCTTTTTGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGTTCAATTTCTGCTGCAACTTCAACTCAGATAGCAAGTTGGCAACTTCTGCCTCCAAGGCATCTCTATTCTCTGTCATCAAAAGAAGGCTGAAGCAACAGCT
ACCATCTCAGTTATCACATTTGGTCTTTGTGTGGTTGCACGGTTCTGTTTCCTCCAGAGGTGGATTTCCTGCTGCAATCACCAACATGGATGATAATACAAAGACCAGAA
ACAACGATCGATCATTACATTGTCATATGCTAGGGTACAATGCTTGCATCGAGACCCTACCCGAAACTTCATCTTCGGCTACACACATCAGCGTTGTCGGTGACAATCGT
CGTTGGCCATTCTCCTTTTCTTCCACCTTCTTCCTAACTTTGTGGCCGCTGCTATATTCTCCTCCCCACGTCTTCATTTCTTGCCACGAAATTACTAACGACCAATGGTA
CCCTGAAAATCTAGCCTTTGCCATGTCTGATCTCTTTCTTGCTTATTCGTACATGATTTTCGCATTCTTAAGGCTTACAAGTGTATCTCCTCGTAACCTAACCTTCTTTG
CTGCGATTTCTGGAGCTGATAAGCGACTTCTAGAGCTGACGGCGGCGGCAACAAGTGCGATAAGGGAGATCGATGACGACCGGTGCGATGAGGGAGATCGACAAGAGTGG
GCCAGTGACTCCTCAAAACATGATCCAAGTGTTTCCTTAAACAAGGAGCGATCCATCTTTCAATGTTGGGATGAGGAGAACCACACGTGGAATTTAAGCCTTAGAAGAGG
TCTTTTCGAGAGAGAGATTCAAGAGTGGATAGCTTTGGTGGAGAGACTCAACGCTGTGCAAAGAAGGGAGGCAGCAAATAGTAAATCCGACACTGACGAATCTGATTTGG
AAGGATTATGTCTTAGGATGGAAGAAAATTTGGATCACCTCTTTATCCACTGTAAGTTTGCGCAACAAGTCTGGGGTTGGTTTGCTAGGAAGGTTGGTCTTCATTTTTGT
TTGCCTCAGAGAGTGGAAGATTGGTTGGTAGAAGGGCTCACGGCTTGGAACTTGGGGATCAAAGCCAAGATCATTATCGGCTGCGCCTTTAGAGCGACTCTTTGGCACAT
TTGGTTGGAAAGGAATGCTAGAGCTTTCGAGAACAAAGCTCTTAGGCTAGATTCTTTTTGTGATTAG
Protein sequenceShow/hide protein sequence
MNLFNFCCNFNSDSKLATSASKASLFSVIKRRLKQQLPSQLSHLVFVWLHGSVSSRGGFPAAITNMDDNTKTRNNDRSLHCHMLGYNACIETLPETSSSATHISVVGDNR
RWPFSFSSTFFLTLWPLLYSPPHVFISCHEITNDQWYPENLAFAMSDLFLAYSYMIFAFLRLTSVSPRNLTFFAAISGADKRLLELTAAATSAIREIDDDRCDEGDRQEW
ASDSSKHDPSVSLNKERSIFQCWDEENHTWNLSLRRGLFEREIQEWIALVERLNAVQRREAANSKSDTDESDLEGLCLRMEENLDHLFIHCKFAQQVWGWFARKVGLHFC
LPQRVEDWLVEGLTAWNLGIKAKIIIGCAFRATLWHIWLERNARAFENKALRLDSFCD