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Lag0017442 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017442
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionVEFS-Box of polycomb protein
Genome locationchr5:3709100..3711003
RNA-Seq ExpressionLag0017442
SyntenyLag0017442
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031490 - chromatin DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR019135 - Polycomb protein, VEFS-Box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596878.1 Polycomb group protein VERNALIZATION 2, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4798.99Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELV SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

XP_023005413.1 polycomb group protein EMBRYONIC FLOWER 2-like isoform X2 [Cucurbita maxima]2.8e-4798.99Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELV SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

XP_023540835.1 polycomb group protein EMBRYONIC FLOWER 2-like isoform X1 [Cucurbita pepo subsp. pepo]2.8e-4798.99Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELV SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

XP_023540836.1 polycomb group protein EMBRYONIC FLOWER 2-like isoform X2 [Cucurbita pepo subsp. pepo]2.8e-4798.99Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELV SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

XP_023540837.1 polycomb group protein EMBRYONIC FLOWER 2-like isoform X3 [Cucurbita pepo subsp. pepo]2.8e-4798.99Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELV SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

TrEMBL top hitse value%identityAlignment
A0A1S3BL60 polycomb group protein EMBRYONIC FLOWER 2 isoform X16.7e-4796.97Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKEL+ SP LF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

A0A5A7TIB9 Polycomb group protein EMBRYONIC FLOWER 2 isoform X16.7e-4796.97Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKEL+ SP LF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

A0A6J1DW63 polycomb group protein EMBRYONIC FLOWER 2-like1.3e-4797.98Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHG+ELV+SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

A0A6J1KZ36 polycomb group protein EMBRYONIC FLOWER 2-like isoform X11.3e-4798.99Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELV SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

A0A6J1L245 polycomb group protein EMBRYONIC FLOWER 2-like isoform X21.3e-4798.99Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELV SPALF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

SwissProt top hitse value%identityAlignment
P0DKJ7 Polycomb group protein FERTILIZATION-INDEPENDENT SEED 21.2e-2458.89Show/hide
Query:  LQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKEL
        L+ RQFYHS  +QPM  ++V+S++DSE+E DD   D  +R  L+  V V+K+EKR M+LWN FVRKQRV+ADGHVPWACE F+KLH +E+
Subjt:  LQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKEL

Q0JF48 Polycomb group protein EMF2A2.9e-3975.25Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALFC
        +LLQKRQF HSH+ QPM  ++VLSD DSEDEVDDDIAD EDRRMLDDFVDVTKDEKR+MH+WNSF+RKQ +LAD HVPWACEAFS+ HG+EL+ + AL  
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALFC

Query:  G
        G
Subjt:  G

Q69KN0 Polycomb group protein EMF2B4.3e-4384.54Show/hide
Query:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL
        LLQKRQF+HSHR QPMAL++V SD+DSEDEVDDDIADFEDRRMLDDFVDVTKDEK +MH+WNSFVRKQRVLADGH+PWACEAFS+ HG+ELV +PAL
Subjt:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL

Q8L6Y4 Polycomb group protein EMBRYONIC FLOWER 22.8e-4282.47Show/hide
Query:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL
        LLQKRQF+HSHR QPMAL++VLSD+DSEDEVDDD+ADFEDRRMLDDFVDVTKDEK++MH+WNSFVRKQRVLADGH+PWACEAFS+LHG  +V +P L
Subjt:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL

Q8W5B1 Polycomb group protein VERNALIZATION 22.2e-3976.77Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        +LLQKRQFYHSHRVQPMAL++V+SD+DSEDEVDDD+ADFEDR+MLDDFVDV KDEK+ MHLWNSFVRKQRV+ADGH+ WACE FS+ + KEL    +LF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

Arabidopsis top hitse value%identityAlignment
AT4G16845.1 VEFS-Box of polycomb protein1.6e-4076.77Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        +LLQKRQFYHSHRVQPMAL++V+SD+DSEDEVDDD+ADFEDR+MLDDFVDV KDEK+ MHLWNSFVRKQRV+ADGH+ WACE FS+ + KEL    +LF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

AT4G16845.2 VEFS-Box of polycomb protein1.6e-4076.77Show/hide
Query:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF
        +LLQKRQFYHSHRVQPMAL++V+SD+DSEDEVDDD+ADFEDR+MLDDFVDV KDEK+ MHLWNSFVRKQRV+ADGH+ WACE FS+ + KEL    +LF
Subjt:  MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALF

AT5G51230.1 VEFS-Box of polycomb protein2.0e-4382.47Show/hide
Query:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL
        LLQKRQF+HSHR QPMAL++VLSD+DSEDEVDDD+ADFEDRRMLDDFVDVTKDEK++MH+WNSFVRKQRVLADGH+PWACEAFS+LHG  +V +P L
Subjt:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL

AT5G51230.2 VEFS-Box of polycomb protein2.0e-4382.47Show/hide
Query:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL
        LLQKRQF+HSHR QPMAL++VLSD+DSEDEVDDD+ADFEDRRMLDDFVDVTKDEK++MH+WNSFVRKQRVLADGH+PWACEAFS+LHG  +V +P L
Subjt:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL

AT5G51230.3 VEFS-Box of polycomb protein2.0e-4382.47Show/hide
Query:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL
        LLQKRQF+HSHR QPMAL++VLSD+DSEDEVDDD+ADFEDRRMLDDFVDVTKDEK++MH+WNSFVRKQRVLADGH+PWACEAFS+LHG  +V +P L
Subjt:  LLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTGCAGAAGCGACAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCACTAGATAAAGTACTATCTGACAAAGATAGTGAGGATGAAGTAGATGATGACATTGC
AGATTTTGAAGACCGAAGGATGCTCGATGATTTTGTGGATGTCACCAAAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTG
ATGGTCATGTTCCTTGGGCATGTGAAGCATTCTCAAAACTTCACGGGAAAGAGCTTGTCATATCTCCGGCTCTCTTTTGTGGGGTGAGCGGTTCGAAGCTCCAGATCTTT
TTGGTTGAGGACAAATACTTTATGTCAGCAAGCAAAATCCCTATGATGACAGTAGGTGAAATCTCCTCGAGCAAGCTTCCAGAGGCTATGCTTGTCAAACAAGAGTTCTT
ATTGGGGGAATTGCCCAAACTATTGACCGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTGCAGAAGCGACAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCACTAGATAAAGTACTATCTGACAAAGATAGTGAGGATGAAGTAGATGATGACATTGC
AGATTTTGAAGACCGAAGGATGCTCGATGATTTTGTGGATGTCACCAAAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTG
ATGGTCATGTTCCTTGGGCATGTGAAGCATTCTCAAAACTTCACGGGAAAGAGCTTGTCATATCTCCGGCTCTCTTTTGTGGGGTGAGCGGTTCGAAGCTCCAGATCTTT
TTGGTTGAGGACAAATACTTTATGTCAGCAAGCAAAATCCCTATGATGACAGTAGGTGAAATCTCCTCGAGCAAGCTTCCAGAGGCTATGCTTGTCAAACAAGAGTTCTT
ATTGGGGGAATTGCCCAAACTATTGACCGCATAG
Protein sequenceShow/hide protein sequence
MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALFCGVSGSKLQIF
LVEDKYFMSASKIPMMTVGEISSSKLPEAMLVKQEFLLGELPKLLTA