; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017444 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017444
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:3730017..3731202
RNA-Seq ExpressionLag0017444
SyntenyLag0017444
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5447348.1 hypothetical protein F2P56_032905 [Juglans regia]5.7e-1838.65Show/hide
Query:  LGPFIGMGDPSRGPPSVKRRRFIIWSLVSQKTRRQARLRRGRIWSLCWLRTRNIGNRGRRRNVDTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIA
        + PF   G P R PP+  +     WSLV ++    A            L   N G +    N DT +  +   +  +   D+RPISLCNV+YK+ +KAIA
Subjt:  LGPFIGMGDPSRGPPSVKRRRFIIWSLVSQKTRRQARLRRGRIWSLCWLRTRNIGNRGRRRNVDTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIA

Query:  NGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        N LK +L  ++S+ +SAFV GRLI +N+++ FE LH + S+  GK   + +KLDMS+AY+R+E
Subjt:  NGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

XP_027120381.1 uncharacterized protein LOC113737334 [Coffea arabica]2.5e-1852Show/hide
Query:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        +T++  +   D  V   +FRPISLCNV+YKI +K +AN LKRVL   +S  +SAF+ GR I +NV+I  E LH L SK  GK   +T+KLDMS+AY+RVE
Subjt:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

XP_027122102.1 uncharacterized protein LOC113739055 [Coffea arabica]1.9e-1852Show/hide
Query:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        +T++  +   D  V   +FRPISLCNV+YKI +K +AN LKRVL   +S  +SAF+ GR I +NV+I  E LH L SK  GK   +T+KLDMS+AY+RVE
Subjt:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

XP_035540109.1 uncharacterized protein LOC118344190 [Juglans regia]4.3e-1854.76Show/hide
Query:  QDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        +DFRPISLCNV+YK+ +K +AN +K+VLN V+S  +SAF+ GRLI +N+++ FE LH + +K +GK+ ++ +KLDMS+AY+RVE
Subjt:  QDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

XP_042974642.1 uncharacterized protein LOC122306274 [Carya illinoinensis]1.1e-1855.42Show/hide
Query:  DFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        D+RPISLCNVVYKI +K +AN LK++LN+VVS  +SAF++GRLI NN+++ +E LH + ++ +GK +++ +KLDMS+AY+R+E
Subjt:  DFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

TrEMBL top hitse value%identityAlignment
A0A2N9GCH6 Uncharacterized protein1.6e-1849.09Show/hide
Query:  NVDTVLRCVT--------PTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKL
        N   +LRCV          T +      FRPISLCNV+YK  +K +AN LK +L S++S  +SAFV GRLIF+N+++ FE  H L +K RGKT ++  KL
Subjt:  NVDTVLRCVT--------PTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKL

Query:  DMSQAYNRVE
        DMS+AY+RVE
Subjt:  DMSQAYNRVE

A0A2N9H567 Reverse transcriptase domain-containing protein2.5e-1960.23Show/hide
Query:  DVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        DV +Q FRPISLCNV+YKI +K +AN LK+VLN V+S  +SAFV GRLI +N+++ FE LH L +K +GKT ++ +KLDMS+AY+RVE
Subjt:  DVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

A0A2N9I4C9 Uncharacterized protein1.6e-1860.98Show/hide
Query:  FRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        FRPISLCNV+YKI +K +AN LK VLN V+S  +SAFV GRLI +N+++ FE LH L SK +G+T ++ +KLDMS+AY+RVE
Subjt:  FRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

A0A6P6X0C0 uncharacterized protein LOC1137373341.2e-1852Show/hide
Query:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        +T++  +   D  V   +FRPISLCNV+YKI +K +AN LKRVL   +S  +SAF+ GR I +NV+I  E LH L SK  GK   +T+KLDMS+AY+RVE
Subjt:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

A0A6P6X866 uncharacterized protein LOC1137390559.4e-1952Show/hide
Query:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        +T++  +   D  V   +FRPISLCNV+YKI +K +AN LKRVL   +S  +SAF+ GR I +NV+I  E LH L SK  GK   +T+KLDMS+AY+RVE
Subjt:  DTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

SwissProt top hitse value%identityAlignment
P14381 Transposon TX1 uncharacterized 149 kDa protein7.5e-0538.1Show/hide
Query:  QDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE
        +++RP+SL +  YKI AKAI+  LK VL  V+   +S  V GR IF+NV +  + LH      R       + LD  +A++RV+
Subjt:  QDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIGFECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATGGTTTGTTTTTGCAGGGACTTTAAGGTGGACCATCTGGGTTTCATGGAGGTGTCTAATCACCGGTCCATTCTCCCCAGTTGGAACAGAGGCAGAGAAGGTGCA
CCTAAGGGGAGATGCCTTCGACCTGTCAGATTTGAGGGAGGTTGGACCCGATTTCCTGAGTGTAGGGTTATTATTAAGCGGGTATGGCAAGACACAGAGAGAAGCAGATC
CCTGTCATACTAGGCAAGGGTGCAAGCATGCTTGCGTGAGCTCTGGACTTGGTCCCTTCATCGGTATGGGGGATCCCTCTAGAGGGCCACCAAGTGTAAAGAGAAGGAGA
TTCATAATTTGGAGTCTAGTAAGCCAGAAAACTAGGAGGCAAGCTAGGTTAAGGCGGGGAAGGATTTGGAGTCTTTGCTGGTTGAGAACAAGAAATATTGGCAATAGAGG
TCGAAGGAGGAATGTTGATACGGTGTTGAGGTGTGTCACCCCCACGGATACAGATGTACAAAACCAGGATTTTCGCCCTATCAGCCTTTGCAACGTCGTCTATAAAATTT
GTGCCAAAGCGATCGCGAATGGACTCAAAAGGGTGCTAAATTCAGTGGTCTCTGCCAAGAAATCGGCTTTCGTAGTTGGTCGATTGATCTTCAATAATGTTGTCATCGGG
TTTGAGTGCTTGCATGTGCTAACTAGTAAAACGAGAGGGAAGACTGACAATGTGACGATGAAGTTGGACATGAGTCAGGCTTATAATCGAGTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATGGTTTGTTTTTGCAGGGACTTTAAGGTGGACCATCTGGGTTTCATGGAGGTGTCTAATCACCGGTCCATTCTCCCCAGTTGGAACAGAGGCAGAGAAGGTGCA
CCTAAGGGGAGATGCCTTCGACCTGTCAGATTTGAGGGAGGTTGGACCCGATTTCCTGAGTGTAGGGTTATTATTAAGCGGGTATGGCAAGACACAGAGAGAAGCAGATC
CCTGTCATACTAGGCAAGGGTGCAAGCATGCTTGCGTGAGCTCTGGACTTGGTCCCTTCATCGGTATGGGGGATCCCTCTAGAGGGCCACCAAGTGTAAAGAGAAGGAGA
TTCATAATTTGGAGTCTAGTAAGCCAGAAAACTAGGAGGCAAGCTAGGTTAAGGCGGGGAAGGATTTGGAGTCTTTGCTGGTTGAGAACAAGAAATATTGGCAATAGAGG
TCGAAGGAGGAATGTTGATACGGTGTTGAGGTGTGTCACCCCCACGGATACAGATGTACAAAACCAGGATTTTCGCCCTATCAGCCTTTGCAACGTCGTCTATAAAATTT
GTGCCAAAGCGATCGCGAATGGACTCAAAAGGGTGCTAAATTCAGTGGTCTCTGCCAAGAAATCGGCTTTCGTAGTTGGTCGATTGATCTTCAATAATGTTGTCATCGGG
TTTGAGTGCTTGCATGTGCTAACTAGTAAAACGAGAGGGAAGACTGACAATGTGACGATGAAGTTGGACATGAGTCAGGCTTATAATCGAGTGGAATGA
Protein sequenceShow/hide protein sequence
MLWFVFAGTLRWTIWVSWRCLITGPFSPVGTEAEKVHLRGDAFDLSDLREVGPDFLSVGLLLSGYGKTQREADPCHTRQGCKHACVSSGLGPFIGMGDPSRGPPSVKRRR
FIIWSLVSQKTRRQARLRRGRIWSLCWLRTRNIGNRGRRRNVDTVLRCVTPTDTDVQNQDFRPISLCNVVYKICAKAIANGLKRVLNSVVSAKKSAFVVGRLIFNNVVIG
FECLHVLTSKTRGKTDNVTMKLDMSQAYNRVE