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Lag0017461 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017461
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:3970950..3971516
RNA-Seq ExpressionLag0017461
SyntenyLag0017461
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.7e-3039.88Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D + D W     + +E   + +    P+L    V++C V K+ T++ ++ +A+R VM SVW VH STR E LG NI+V+ F S+SEK R+LS+GPW F+
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG----GW
        K++ VL SPT ++ P  ++F+ CAFW+ I+ +PF  ++  MA+ LG  +G V ++ G    GW
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG----GW

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]8.5e-2738.04Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D + + W    L++E+   I +    PL+    VQ  AVGK+ T++ ++ +A R VM S+W VH ST IE  G N++V+ F S++EK R+L++GPW+F+
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLV--VDVGGGWRW
         ++ VL SPT +D P  ++F+  A W+ I+ +PF  +   MA  LG  IG V  +D  G + W
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLV--VDVGGGWRW

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.9e-2435.93Show/hide
Query:  DVDGLADQWNKMGL-SEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWN
        D + L   W K  L SEE+ I + V  +   + +  +    VGK++  R ++ D L RV++  W V     +E++G N+F+  FC   +  R++ TGPW 
Subjt:  DVDGLADQWNKMGL-SEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWN

Query:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVG---GGWRWG
        FDKA+ VL  P  S + + ++F+R AFW+H+  +P ++L   MA  LGN IG  VDV     G+ WG
Subjt:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVG---GGWRWG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.9e-2740.13Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D +   W    L +EE   I +    P+L    +Q+CAVGK+  ++ +  +A   VM  VW +H STRIE  G NI+V+ F +++EK R+ S GPW FD
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG
        K++ +LV  T ++ P  ID S CAFWV I+ + F  +T  MA  LG  +G V +V G
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]4.2e-3445.81Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D + + W    L+ EE     V    P+L    +Q+C VGK+ T++ ++  AL  VM  VW +H STRIEA G NI+V+ F ++ EK+R+LS+GPW FD
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDV
        K++FVLVSPT +D P  +DF  CAFWV I+ +PF +LT  MA  LG+ +G V +V
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDV

TrEMBL top hitse value%identityAlignment
A0A6J1D765 uncharacterized protein LOC1110179021.8e-3039.88Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D + D W     + +E   + +    P+L    V++C V K+ T++ ++ +A+R VM SVW VH STR E LG NI+V+ F S+SEK R+LS+GPW F+
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG----GW
        K++ VL SPT ++ P  ++F+ CAFW+ I+ +PF  ++  MA+ LG  +G V ++ G    GW
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG----GW

A0A6J1DP89 uncharacterized protein LOC1110229324.1e-2738.04Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D + + W    L++E+   I +    PL+    VQ  AVGK+ T++ ++ +A R VM S+W VH ST IE  G N++V+ F S++EK R+L++GPW+F+
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLV--VDVGGGWRW
         ++ VL SPT +D P  ++F+  A W+ I+ +PF  +   MA  LG  IG V  +D  G + W
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLV--VDVGGGWRW

A0A6J1DU55 uncharacterized protein LOC1110231351.9e-2435.93Show/hide
Query:  DVDGLADQWNKMGL-SEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWN
        D + L   W K  L SEE+ I + V  +   + +  +    VGK++  R ++ D L RV++  W V     +E++G N+F+  FC   +  R++ TGPW 
Subjt:  DVDGLADQWNKMGL-SEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWN

Query:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVG---GGWRWG
        FDKA+ VL  P  S + + ++F+R AFW+H+  +P ++L   MA  LGN IG  VDV     G+ WG
Subjt:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVG---GGWRWG

A0A6J1DVS4 uncharacterized protein LOC1110235551.4e-2740.13Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D +   W    L +EE   I +    P+L    +Q+CAVGK+  ++ +  +A   VM  VW +H STRIE  G NI+V+ F +++EK R+ S GPW FD
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG
        K++ +LV  T ++ P  ID S CAFWV I+ + F  +T  MA  LG  +G V +V G
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGG

A0A6J1DYG3 uncharacterized protein LOC1110246762.0e-3445.81Show/hide
Query:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD
        +D + + W    L+ EE     V    P+L    +Q+C VGK+ T++ ++  AL  VM  VW +H STRIEA G NI+V+ F ++ EK+R+LS+GPW FD
Subjt:  VDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDV
        K++FVLVSPT +D P  +DF  CAFWV I+ +PF +LT  MA  LG+ +G V +V
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTGTGAGTGCGAGCGATGTGGATGGTTTGGCTGATCAGTGGAATAAGATGGGCCTATCAGAGGAGGAAGCGATTGTGATACCTGTGCCGGAGAATGTTCCGTT
ACTAGATGATTCGACAGTACAGGTTTGTGCGGTGGGTAAGGTTATGACGAATCGTTTTGTGAATCCAGATGCGTTACGGAGGGTGATGATGTCTGTCTGGAATGTCCACC
GATCGACGAGGATTGAAGCTCTCGGCGACAACATATTTGTAGTCCAGTTTTGCTCAGTGAGTGAGAAGCGCCGAATACTGAGCACGGGCCCATGGAATTTCGATAAAGCA
GTGTTTGTACTGGTCTCCCCTACAGGTTCGGATAGTCCAGCACTGATTGATTTTTCCAGGTGTGCTTTCTGGGTCCATATTAATCGAGTTCCTTTCAATTTTCTTACGCC
TGCGATGGCGAGTGCGTTGGGGAATATTATTGGGCTGGTTGTGGATGTGGGGGGGGGGTGGAGGTGGGGACTGGTTGGGGCCAGTCATGAGGGTACGGGTAATGTTGAAT
ATCACGAAGCCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTGTGAGTGCGAGCGATGTGGATGGTTTGGCTGATCAGTGGAATAAGATGGGCCTATCAGAGGAGGAAGCGATTGTGATACCTGTGCCGGAGAATGTTCCGTT
ACTAGATGATTCGACAGTACAGGTTTGTGCGGTGGGTAAGGTTATGACGAATCGTTTTGTGAATCCAGATGCGTTACGGAGGGTGATGATGTCTGTCTGGAATGTCCACC
GATCGACGAGGATTGAAGCTCTCGGCGACAACATATTTGTAGTCCAGTTTTGCTCAGTGAGTGAGAAGCGCCGAATACTGAGCACGGGCCCATGGAATTTCGATAAAGCA
GTGTTTGTACTGGTCTCCCCTACAGGTTCGGATAGTCCAGCACTGATTGATTTTTCCAGGTGTGCTTTCTGGGTCCATATTAATCGAGTTCCTTTCAATTTTCTTACGCC
TGCGATGGCGAGTGCGTTGGGGAATATTATTGGGCTGGTTGTGGATGTGGGGGGGGGGTGGAGGTGGGGACTGGTTGGGGCCAGTCATGAGGGTACGGGTAATGTTGAAT
ATCACGAAGCCCCTTAG
Protein sequenceShow/hide protein sequence
MASVSASDVDGLADQWNKMGLSEEEAIVIPVPENVPLLDDSTVQVCAVGKVMTNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTGPWNFDKA
VFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNIIGLVVDVGGGWRWGLVGASHEGTGNVEYHEAP