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Lag0017506 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017506
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEncodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: (RGF1), (RGF2), (RGF3), (RGF4), (RGF5), (RGF6), (RGF7), (RGF8) and (RGF9).
Genome locationchr5:4506173..4507151
RNA-Seq ExpressionLag0017506
SyntenyLag0017506
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028383.1 Root meristem growth factor 6 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3066.67Show/hide
Query:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMK--DKDKDKDKVMN
        M MP SL L LLFLST LHA DAR L+    S      I   F TNQL +S D++ SN VSSME VG+EIL+GMKK RRL ME+P++  D+DKD DKV+N
Subjt:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMK--DKDKDKDKVMN

Query:  SEENEVGEDMVVMDYAQPHRKPPIHNEKP
        SEENEVGEDMVVMDYAQPHRKPPIHN+KP
Subjt:  SEENEVGEDMVVMDYAQPHRKPPIHNEKP

XP_023005579.1 uncharacterized protein LOC111498521 [Cucurbita maxima]3.2e-3064.89Show/hide
Query:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDK----DKV
        M MP SL L LLFLST LHA DAR L+    S      I   F  +QL RS DK+ SN+VSS+E VG+EIL+GMKK RRL ME+P++D+D+DK    DKV
Subjt:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDK----DKV

Query:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
        +NSEENEVGEDMVVMDYAQPHRKPPIHN KP
Subjt:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

XP_023540680.1 uncharacterized protein LOC111800973 [Cucurbita pepo subsp. pepo]3.8e-3166.67Show/hide
Query:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDK--DKVMN
        M MP S  L LLFLST LHA DAR L+    S      I   F TNQL RS D++ SN VSSME VG+EIL+GMKK RRL ME+P++D+D+DK  DKV+N
Subjt:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDK--DKVMN

Query:  SEENEVGEDMVVMDYAQPHRKPPIHNEKP
        SEENEVGEDMVVMDYAQPHRKPPIHN+KP
Subjt:  SEENEVGEDMVVMDYAQPHRKPPIHNEKP

XP_038905996.1 uncharacterized protein LOC120091906 isoform X1 [Benincasa hispida]1.9e-2765.91Show/hide
Query:  MPSLVLILL-FLSTLHAYDARHLRFFEISLSSVSRIE-----QAFWTNQLTRSFDKNDSNKVSSME-IVGVEIL-QGMKKH-RRLVMEIPMKDKDKDKDK
        MP L LILL F STLHA +AR LRFFE S S VSRIE     Q  W +Q  RSF++++S+K+S  E IVG+E+L QGMKKH  RLVME PM      K+K
Subjt:  MPSLVLILL-FLSTLHAYDARHLRFFEISLSSVSRIE-----QAFWTNQLTRSFDKNDSNKVSSME-IVGVEIL-QGMKKH-RRLVMEIPMKDKDKDKDK

Query:  VMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
        V+NS+ENEVGEDMVVMDYAQPHRKPPIHNEKP
Subjt:  VMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

XP_038905997.1 uncharacterized protein LOC120091906 isoform X2 [Benincasa hispida]2.3e-2865.65Show/hide
Query:  MPSLVLILL-FLSTLHAYDARHLRFFEISLSSVSRIE-----QAFWTNQLTRSFDKNDSNKVSSME-IVGVEILQGMKKH-RRLVMEIPMKDKDKDKDKV
        MP L LILL F STLHA +AR LRFFE S S VSRIE     Q  W +Q  RSF++++S+K+S  E IVG+E+L+GMKKH  RLVME PM      K+KV
Subjt:  MPSLVLILL-FLSTLHAYDARHLRFFEISLSSVSRIE-----QAFWTNQLTRSFDKNDSNKVSSME-IVGVEILQGMKKH-RRLVMEIPMKDKDKDKDKV

Query:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
        +NS+ENEVGEDMVVMDYAQPHRKPPIHNEKP
Subjt:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

TrEMBL top hitse value%identityAlignment
A0A0A0L298 Uncharacterized protein3.7e-2455.15Show/hide
Query:  MAMPSLVLILLFL-STLHAYDARHLRFFEIS-----LSSVSRIEQAFWT--NQLTRSFDKNDSNKV--SSMEIVGVEILQGMKKH-RRLVMEIPMKDKDK
        MAMP   LILLF  STLHA DA  LRFF+ S     ++ +  + Q  W+  +    SFDKN+++ +  +   I+G+E+L+GMK+   RLVME PM     
Subjt:  MAMPSLVLILLFL-STLHAYDARHLRFFEIS-----LSSVSRIEQAFWT--NQLTRSFDKNDSNKV--SSMEIVGVEILQGMKKH-RRLVMEIPMKDKDK

Query:  DKDKVMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
         K+KVMNS+ENEVGEDMVVMDYAQPHRKPPIHNEKP
Subjt:  DKDKVMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

A0A2J6MHI4 Uncharacterized protein9.1e-0736.57Show/hide
Query:  LHAYDARHLRFF------EISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEIL------------------QGMKKHRRLVMEIPMKDKDKDK
        +HA D+RHL  F      E+ L + S+  +    N+     + N  +K S  E    E+                   QG K H RL ME   KD    K
Subjt:  LHAYDARHLRFF------EISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEIL------------------QGMKKHRRLVMEIPMKDKDKDK

Query:  DKVMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
        +K+ NS+++ V ED+ VMDYAQPHRKPPIHN +P
Subjt:  DKVMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

A0A438K320 Uncharacterized protein5.4e-0737.12Show/hide
Query:  MPSLVLILLFLSTLHAYDARHLRFF-----EISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSME----IVGVEILQGMKKHRRLVMEIPMKDKDKDKDK
        M SL+L+LL   ++HA +ARHL        E+ L S   +E+A   ++++          + SME    +   +IL G K+H RL+    +     D ++
Subjt:  MPSLVLILLFLSTLHAYDARHLRFF-----EISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSME----IVGVEILQGMKKHRRLVMEIPMKDKDKDKDK

Query:  VMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
         ++S+E ++ ED+VVMDYAQPHRKPPIHN+ P
Subjt:  VMNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

A0A6J1DKL1 uncharacterized protein LOC1110213968.8e-2660.31Show/hide
Query:  MAMPSLVLILLFLSTLHAYDARH-LRFFEIS-----LSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDKDKV
        MA PSL+ ILL LSTLHA DA H L+ FE S     L  ++ I Q F T+Q  RS +KN  +KVSS   +G+ IL+GMKKH+RL ME  M    K+K+K+
Subjt:  MAMPSLVLILLFLSTLHAYDARH-LRFFEIS-----LSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDKDKV

Query:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
        M+ EENEVGEDMVVMDYAQPHRKPPIHN+KP
Subjt:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

A0A6J1KZM9 uncharacterized protein LOC1114985211.5e-3064.89Show/hide
Query:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDK----DKV
        M MP SL L LLFLST LHA DAR L+    S      I   F  +QL RS DK+ SN+VSS+E VG+EIL+GMKK RRL ME+P++D+D+DK    DKV
Subjt:  MAMP-SLVLILLFLST-LHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDK----DKV

Query:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP
        +NSEENEVGEDMVVMDYAQPHRKPPIHN KP
Subjt:  MNSEENEVGEDMVVMDYAQPHRKPPIHNEKP

SwissProt top hitse value%identityAlignment
Q93VK8 Protein GOLVEN 18.2e-0583.33Show/hide
Query:  EVGEDMVVMDYAQPHRKPPIHNEK
        E GE++VVMDY QPHRKPPIHNEK
Subjt:  EVGEDMVVMDYAQPHRKPPIHNEK

Arabidopsis top hitse value%identityAlignment
AT4G16515.1 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).5.9e-0683.33Show/hide
Query:  EVGEDMVVMDYAQPHRKPPIHNEK
        E GE++VVMDY QPHRKPPIHNEK
Subjt:  EVGEDMVVMDYAQPHRKPPIHNEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGCCTTCTTTGGTTCTCATTCTCCTATTCTTATCAACATTGCATGCATATGATGCTCGTCATCTTCGATTCTTCGAGATCAGTTTGAGTTCTGTTTCAAGGAT
CGAACAAGCGTTTTGGACAAATCAGCTAACGAGAAGTTTTGACAAAAACGATAGTAACAAGGTTTCTTCTATGGAGATTGTTGGAGTTGAAATATTACAGGGAATGAAGA
AGCATAGAAGGTTGGTAATGGAGATTCCAATGAAAGACAAAGACAAAGACAAAGACAAAGTGATGAACTCTGAGGAAAATGAGGTTGGAGAAGACATGGTAGTGATGGAT
TATGCACAACCTCACAGGAAACCTCCTATTCACAATGAAAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGCCTTCTTTGGTTCTCATTCTCCTATTCTTATCAACATTGCATGCATATGATGCTCGTCATCTTCGATTCTTCGAGATCAGTTTGAGTTCTGTTTCAAGGAT
CGAACAAGCGTTTTGGACAAATCAGCTAACGAGAAGTTTTGACAAAAACGATAGTAACAAGGTTTCTTCTATGGAGATTGTTGGAGTTGAAATATTACAGGGAATGAAGA
AGCATAGAAGGTTGGTAATGGAGATTCCAATGAAAGACAAAGACAAAGACAAAGACAAAGTGATGAACTCTGAGGAAAATGAGGTTGGAGAAGACATGGTAGTGATGGAT
TATGCACAACCTCACAGGAAACCTCCTATTCACAATGAAAAACCCTAG
Protein sequenceShow/hide protein sequence
MAMPSLVLILLFLSTLHAYDARHLRFFEISLSSVSRIEQAFWTNQLTRSFDKNDSNKVSSMEIVGVEILQGMKKHRRLVMEIPMKDKDKDKDKVMNSEENEVGEDMVVMD
YAQPHRKPPIHNEKP