; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017507 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017507
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptiontRNA_edit domain-containing protein
Genome locationchr5:4512729..4520176
RNA-Seq ExpressionLag0017507
SyntenyLag0017507
Gene Ontology termsGO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsIPR007214 - YbaK/aminoacyl-tRNA synthetase-associated domain
IPR036754 - YbaK/aminoacyl-tRNA synthetase-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448863.1 PREDICTED: uncharacterized protein LOC103490895 [Cucumis melo]2.2e-12090.76Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MG+E+EAMAE+NSMEALAKLEHRQTLIL+RIS LEL YLPNLDS PS +P +GAD DTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVL+AAS+
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQAPS+VVDCSDRNNSKYY+VVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETS KLTGYEHNGVTCIGM+TDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
        VKLNPDYFWLGGGEIDLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

XP_022951583.1 uncharacterized protein LOC111454353 [Cucurbita moschata]3.6e-11587.82Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MGTE  AMAERNSMEALAKLE+RQTLI+NRISKLELAYLPNLDS PSPI   GAD DTVARLS ILRTNAVNDFSFKRVPSDYYDW+LEARRDVLNAASV
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQA S+VVDCS+RNNSKYYVVVVQY+AKFNAE V+SFLYSLNDGKI KKKFNLRLAPEE SA+LTGY HN VTCIGM+TDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
         KL+PDYFWLGGGE+DLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

XP_023005520.1 uncharacterized protein LOC111498483 [Cucurbita maxima]5.7e-11386.13Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MGTE  A+AERNSMEALAKLE+RQTLI+NRISKLELAYLPNLDS PSPI  + AD DTV+RLS ILRTNAVNDFSF RVPSDYYDW+LEARRDVLNAASV
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQA S+VVDCS+RNNSKYYVVVVQY+AKFNAE V+SFLYSLNDGKI KKKFNLRLAPEE SA+LTGY HN VTCIGM+TDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
         KL+PDYFWLGGGE+DLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

XP_023538668.1 uncharacterized protein LOC111799544 [Cucurbita pepo subsp. pepo]2.6e-11386.55Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MGTE  AMAERNSMEALAKLE+RQTLI+NRI KLELAYLPNLDS PSPI  + AD DTV+RLS ILRTNAVNDFSFKRVPSDYYDW+LEARRDVLNAASV
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQA S+VVDCS+RNNSKYYVVVVQY+AKFNAE V+SFLYSLNDGKI KKKFNLRLAPEE SA+LTGY HN VTCIGM+TDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
         KL+PDYFWLGGGE+DLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

XP_038903466.1 uncharacterized protein LOC120090048 [Benincasa hispida]1.3e-12091.6Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MGTE+EAMAE+N MEALAKLEHRQTLIL+RISKLELAYLPNLDSA S +P +G D DTVARLSAILRTN+VNDFSFKRVPSDYYDW LEARRDVL+AASV
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQAPS+VVDCSDRNNSKYY+VVVQYTAKFNAE VKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
        VKLNPDYFWLGGGEIDLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

TrEMBL top hitse value%identityAlignment
A0A0A0L4A0 tRNA_edit domain-containing protein1.8e-10480.75Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGA-DADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAAS
        MGTE+EAMAE+NSMEA                 L+L  LPNLDS PS +P +GA D DTVARLSAIL TNAVNDFSFKRVPSDYYDW LEARRDVL+AAS
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGA-DADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAAS

Query:  VDHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEA
        +DHLCKSIVLVNTQAPS++VDCSDRNNSKYY+VVVQYTAKFNAE ++SFLYSLNDGKIAKKKFNLRLAPEE SAKLTGYEHNGVTCIGM+TDIPVILDEA
Subjt:  VDHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEA

Query:  VVKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
        +VKLNPDYFWLGGGE DLKLGIRTSEF+N+VKPFI+KCS
Subjt:  VVKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

A0A1S3BLB4 uncharacterized protein LOC1034908951.1e-12090.76Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MG+E+EAMAE+NSMEALAKLEHRQTLIL+RIS LEL YLPNLDS PS +P +GAD DTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVL+AAS+
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQAPS+VVDCSDRNNSKYY+VVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETS KLTGYEHNGVTCIGM+TDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
        VKLNPDYFWLGGGEIDLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

A0A6J1DMB4 uncharacterized protein LOC1110213535.8e-9593.01Show/hide
Query:  GADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASVDHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSL
        GAD DTVARLSAILRTNAV+DFSFKRVP DYYDW LEARRDVL A SVDHLCKSIVLVNTQAPSNVVDCS+RNNSKYYVVVVQYTAKF+AE VK+FLYSL
Subjt:  GADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASVDHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSL

Query:  NDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAVVKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
        NDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGM+TDIPVILDEA+ KLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
Subjt:  NDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAVVKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

A0A6J1GI39 uncharacterized protein LOC1114543531.7e-11587.82Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MGTE  AMAERNSMEALAKLE+RQTLI+NRISKLELAYLPNLDS PSPI   GAD DTVARLS ILRTNAVNDFSFKRVPSDYYDW+LEARRDVLNAASV
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQA S+VVDCS+RNNSKYYVVVVQY+AKFNAE V+SFLYSLNDGKI KKKFNLRLAPEE SA+LTGY HN VTCIGM+TDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
         KL+PDYFWLGGGE+DLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

A0A6J1KXM4 uncharacterized protein LOC1114984832.8e-11386.13Show/hide
Query:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV
        MGTE  A+AERNSMEALAKLE+RQTLI+NRISKLELAYLPNLDS PSPI  + AD DTV+RLS ILRTNAVNDFSF RVPSDYYDW+LEARRDVLNAASV
Subjt:  MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASV

Query:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV
        DHLCKSIVLVNTQA S+VVDCS+RNNSKYYVVVVQY+AKFNAE V+SFLYSLNDGKI KKKFNLRLAPEE SA+LTGY HN VTCIGM+TDIPVILDEA+
Subjt:  DHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAV

Query:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
         KL+PDYFWLGGGE+DLKLGIRTSEF+NFVKPFI+KCS
Subjt:  VKLNPDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain3.0e-9172.22Show/hide
Query:  MAERNSME-ALAKLEHRQTLILNRISKLELAYLP-NLDSAPSP-IPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASVDHLC
        M +   ME A A+LE  Q  IL++IS LE ++LP N  +APSP +P +  + +TV RLS IL++  VNDF FKRV +DYYDW LE+RRDVL A+SVDHLC
Subjt:  MAERNSME-ALAKLEHRQTLILNRISKLELAYLP-NLDSAPSP-IPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASVDHLC

Query:  KSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAVVKLN
        KSIVLVNTQA SN++DCSD NNSKYYVVVVQYTA+FNAEAVK FLYSLN+GKI KK+FNLRLAPEETS KLTG+EHNGVTCIGM+T+IPVILDEA+ KL 
Subjt:  KSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAVVKLN

Query:  PDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS
        PD+FWLGGGEIDLKLG+RTSEF+ FVKPFIV CS
Subjt:  PDYFWLGGGEIDLKLGIRTSEFVNFVKPFIVKCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACAGAGACTGAAGCAATGGCAGAACGAAACTCCATGGAAGCACTAGCGAAGCTCGAACACCGCCAGACCCTAATTCTCAATCGAATTTCAAAGCTCGAGCTTGC
ATACCTTCCAAATCTCGACTCTGCACCTTCCCCTATTCCCTTCAATGGCGCAGATGCCGACACTGTGGCTCGACTCTCCGCCATTCTCCGAACCAACGCTGTCAACGACT
TCTCCTTCAAGAGAGTGCCCTCTGATTACTACGATTGGACTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCCTCCGTCGACCATCTCTGCAAGAGCATCGTTCTGGTA
AATACTCAGGCCCCGTCCAATGTTGTTGATTGTAGTGATCGCAACAATTCAAAATATTATGTTGTTGTTGTTCAGTATACTGCTAAATTCAATGCTGAAGCTGTTAAAAG
CTTCCTGTATTCACTCAACGATGGCAAGATAGCAAAAAAGAAATTTAACTTGAGACTTGCTCCAGAGGAGACATCTGCGAAGCTAACTGGATATGAGCATAATGGAGTGA
CGTGCATTGGCATGAGAACAGATATTCCAGTGATTTTGGACGAAGCGGTTGTGAAACTAAATCCTGATTATTTTTGGCTGGGTGGTGGGGAAATCGACCTGAAGTTGGGA
ATCAGGACATCTGAGTTCGTAAACTTCGTTAAACCCTTCATTGTCAAGTGCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGACAGAGACTGAAGCAATGGCAGAACGAAACTCCATGGAAGCACTAGCGAAGCTCGAACACCGCCAGACCCTAATTCTCAATCGAATTTCAAAGCTCGAGCTTGC
ATACCTTCCAAATCTCGACTCTGCACCTTCCCCTATTCCCTTCAATGGCGCAGATGCCGACACTGTGGCTCGACTCTCCGCCATTCTCCGAACCAACGCTGTCAACGACT
TCTCCTTCAAGAGAGTGCCCTCTGATTACTACGATTGGACTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCCTCCGTCGACCATCTCTGCAAGAGCATCGTTCTGGTA
AATACTCAGGCCCCGTCCAATGTTGTTGATTGTAGTGATCGCAACAATTCAAAATATTATGTTGTTGTTGTTCAGTATACTGCTAAATTCAATGCTGAAGCTGTTAAAAG
CTTCCTGTATTCACTCAACGATGGCAAGATAGCAAAAAAGAAATTTAACTTGAGACTTGCTCCAGAGGAGACATCTGCGAAGCTAACTGGATATGAGCATAATGGAGTGA
CGTGCATTGGCATGAGAACAGATATTCCAGTGATTTTGGACGAAGCGGTTGTGAAACTAAATCCTGATTATTTTTGGCTGGGTGGTGGGGAAATCGACCTGAAGTTGGGA
ATCAGGACATCTGAGTTCGTAAACTTCGTTAAACCCTTCATTGTCAAGTGCAGTTAG
Protein sequenceShow/hide protein sequence
MGTETEAMAERNSMEALAKLEHRQTLILNRISKLELAYLPNLDSAPSPIPFNGADADTVARLSAILRTNAVNDFSFKRVPSDYYDWTLEARRDVLNAASVDHLCKSIVLV
NTQAPSNVVDCSDRNNSKYYVVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEHNGVTCIGMRTDIPVILDEAVVKLNPDYFWLGGGEIDLKLG
IRTSEFVNFVKPFIVKCS