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Lag0017520 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017520
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:4769537..4770484
RNA-Seq ExpressionLag0017520
SyntenyLag0017520
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53376.1 hypothetical protein EZV62_022545 [Acer yangbiense]4.1e-3435.71Show/hide
Query:  ISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGA
        I+   E + L AEE G V++M +E     V+D+    V K+ + K +N E FK +I +IW   G+V ++  G+N+F   +N+  D+ +++  GPW +  +
Subjt:  ISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGA

Query:  LILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFE
        LI+ E+  G    S+L F  A FW+   D+P +C+NR+ A+ L   +G+  ++  E  E   G  M +K++ID  +PL+R + +KIG   E   V +++E
Subjt:  LILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFE

Query:  KLLDFCFGCGKIGHLSKECEDIEA
        KL DFC+ CG++G+  KEC D EA
Subjt:  KLLDFCFGCGKIGHLSKECEDIEA

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]3.7e-3533.7Show/hide
Query:  IEEHIISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPW
        +E   IS + EK+ L  ++ G + +++     +  Q L    + K  T K IN E FKS I  IW  + +V ++  G N+F+  + +  D+++I++GGPW
Subjt:  IEEHIISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPW

Query:  LYDGALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWV
        L+D  L++  E  G+E+ + LQFRY  FWI   +LP  CLNR+    LG  VG+ +++D  +  +  G  +RI++ ID   PL+RG+ + +G   +   V
Subjt:  LYDGALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWV

Query:  DMRFEKLLDFCFGCGKIGHLSKECEDIEALSEEKLQYGLGLKKDPPARVNYKNR-KGSPMKRN-PKENRE
         + +E+L +FC+ CGKIGHL ++C     L+ +++      K  P  R   + R KG+  K+N P+ +RE
Subjt:  DMRFEKLLDFCFGCGKIGHLSKECEDIEALSEEKLQYGLGLKKDPPARVNYKNR-KGSPMKRN-PKENRE

TXG57113.1 hypothetical protein EZV62_018426 [Acer yangbiense]9.2e-3434.69Show/hide
Query:  AEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEIKGNE
        AEE   +++M +E     V+D++   V K+ + K +N E FK +I +IW+  G+V ++  G+N F   + +  D+ ++ + GPW +  +LI+ E+  G  
Subjt:  AEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEIKGNE

Query:  RYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCFGCGK
          S+L F  A FW+   D+P +C+NR+ A+ L   +G+  ++ +E  E   G  MR+K++ID  +PL+R + +K+G   E   V +++E+L +FC+ CGK
Subjt:  RYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCFGCGK

Query:  IGHLSKECEDIE----ALSEEKLQYGLGLKKDPPARVNYKNRKGS
        IGH  KEC D E    AL     ++G  LK     RV  K R GS
Subjt:  IGHLSKECEDIE----ALSEEKLQYGLGLKKDPPARVNYKNRKGS

XP_021726128.1 uncharacterized protein LOC110693273 [Chenopodium quinoa]1.6e-3335.75Show/hide
Query:  NQLEKMKLTAEEK----GKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYD
        N  EK+KLT EE      +++  EDE  + ++       V K+ T K+ N E  K  +  +W L   V+IK    N+F   + +  DK K+IDG PW +D
Subjt:  NQLEKMKLTAEEK----GKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYD

Query:  GALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMR
        G L+L ++I G E+ S + F+Y   W+  LD+P    NR+   ++G+ +G F ++D E    G G+ MR+K+ ID  +PLRRG+ + +G+ S  +W+ ++
Subjt:  GALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMR

Query:  FEKLLDFCFGCGKIGHLSKEC
        +E+L DFCF CG++ H    C
Subjt:  FEKLLDFCFGCGKIGHLSKEC

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]6.0e-3333.05Show/hide
Query:  MKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEI
        + LT+EE   V+++  E     +   +   V K+ T +  N E  K+ +  +W     + ++  G+N+F   +  V DKR+++  GPW +D  L++  E+
Subjt:  MKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEI

Query:  KGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCF
          N + S +Q     FW+H  +LP V +N+K  E +GN VG+F  +D ED     G +MRI++ +D ++PLRRGM + + S +E  WVD ++E+L  +C+
Subjt:  KGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCF

Query:  GCGKIGHLSKECED----IEALSEEKLQYGLGLKKD
         CG++GH  +EC+D     +    + LQYG  L+ D
Subjt:  GCGKIGHLSKECED----IEALSEEKLQYGLGLKKD

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein1.8e-3533.7Show/hide
Query:  IEEHIISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPW
        +E   IS + EK+ L  ++ G + +++     +  Q L    + K  T K IN E FKS I  IW  + +V ++  G N+F+  + +  D+++I++GGPW
Subjt:  IEEHIISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPW

Query:  LYDGALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWV
        L+D  L++  E  G+E+ + LQFRY  FWI   +LP  CLNR+    LG  VG+ +++D  +  +  G  +RI++ ID   PL+RG+ + +G   +   V
Subjt:  LYDGALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWV

Query:  DMRFEKLLDFCFGCGKIGHLSKECEDIEALSEEKLQYGLGLKKDPPARVNYKNR-KGSPMKRN-PKENRE
         + +E+L +FC+ CGKIGHL ++C     L+ +++      K  P  R   + R KG+  K+N P+ +RE
Subjt:  DMRFEKLLDFCFGCGKIGHLSKECEDIEALSEEKLQYGLGLKKDPPARVNYKNR-KGSPMKRN-PKENRE

A0A5C7HB59 Uncharacterized protein2.0e-3435.71Show/hide
Query:  ISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGA
        I+   E + L AEE G V++M +E     V+D+    V K+ + K +N E FK +I +IW   G+V ++  G+N+F   +N+  D+ +++  GPW +  +
Subjt:  ISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGA

Query:  LILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFE
        LI+ E+  G    S+L F  A FW+   D+P +C+NR+ A+ L   +G+  ++  E  E   G  M +K++ID  +PL+R + +KIG   E   V +++E
Subjt:  LILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFE

Query:  KLLDFCFGCGKIGHLSKECEDIEA
        KL DFC+ CG++G+  KEC D EA
Subjt:  KLLDFCFGCGKIGHLSKECEDIEA

A0A5C7HJ97 CCHC-type domain-containing protein4.5e-3434.69Show/hide
Query:  AEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEIKGNE
        AEE   +++M +E     V+D++   V K+ + K +N E FK +I +IW+  G+V ++  G+N F   + +  D+ ++ + GPW +  +LI+ E+  G  
Subjt:  AEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEIKGNE

Query:  RYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCFGCGK
          S+L F  A FW+   D+P +C+NR+ A+ L   +G+  ++ +E  E   G  MR+K++ID  +PL+R + +K+G   E   V +++E+L +FC+ CGK
Subjt:  RYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCFGCGK

Query:  IGHLSKECEDIE----ALSEEKLQYGLGLKKDPPARVNYKNRKGS
        IGH  KEC D E    AL     ++G  LK     RV  K R GS
Subjt:  IGHLSKECEDIE----ALSEEKLQYGLGLKKDPPARVNYKNRKGS

A0A5C7HVP8 Uncharacterized protein8.4e-3334.42Show/hide
Query:  EEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEIKGNER
        +E  K+ ++ ++  R  V+D+E+  V K+ + K +N E FKS+I ++W   G V I+  GEN+F   +N++ D+ +I   GPW +D +LI+ E+ +G   
Subjt:  EEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDGALILFEEIKGNER

Query:  YSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCFGCGKI
         S+L F    FW+   D+P +C+NR+ A+ L   +GKF ++ +E  E   G  +R+K+ ID  +PL+R + +K+        V +++E+L +FC+ C ++
Subjt:  YSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDFCFGCGKI

Query:  GHLSKECEDIEALSE
        GH   EC D+EA  E
Subjt:  GHLSKECEDIEALSE

A0A803LAB8 Uncharacterized protein1.7e-3335.45Show/hide
Query:  NQLEKMKLTAEEK---GKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDG
        N  EK KLT EE    G+     D++  K    L  V   K+ T K  N E  K  +  +W L+G VIIK    N+F   + +  DK K+IDG PW +DG
Subjt:  NQLEKMKLTAEEK---GKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPWLYDG

Query:  ALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRF
         L++ +EIKG E+ S ++F++A  W+  LD+P    N+K   ++G+ +G F + D  D   G G+ +RIK+ ID  +PLRRG+ +  G  S  +WV +++
Subjt:  ALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRF

Query:  EKLLDFCFGCGKIGHLSKEC----EDIEALSEEKLQYGLGLKKDPPARVNYKNRKGSPMKRNPKENRE
        E+L +FCF CG++ H    C    E  E  ++   QYG  L+  P  ++    RK        K+ RE
Subjt:  EKLLDFCFGCGKIGHLSKEC----EDIEALSEEKLQYGLGLKKDPPARVNYKNRKGSPMKRNPKENRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAAAAAGAGGAAAGCAGTAAAATAGAAGAACACATCATCAGTAACCAGCTCGAAAAGATGAAACTGACCGCAGAAGAAAAAGGTAAAGTGATGAAAATGGA
AGATGAAGAGCTACGAAAGAAAGTTCAAGATCTCGAGAATGTAGCGGTATGCAAAATAGCCACAGAAAAATATATCAATCCAGAAATATTCAAGTCTATGATACCCAAAA
TATGGCACTTGGAAGGCAAAGTTATAATAAAAAAAGCAGGGGAAAACATGTTTGAATGCACCTACAACTCAGTCAGAGACAAAAGGAAAATTATAGATGGAGGACCATGG
TTGTATGATGGTGCTCTCATATTATTTGAAGAAATAAAAGGAAACGAGAGATACTCACGGCTACAATTCAGGTACGCATCGTTCTGGATTCATTTCTTAGACTTACCAAG
AGTGTGTTTGAATAGGAAATGGGCGGAAGATCTAGGAAACACAGTGGGAAAGTTTGAAAAGCTAGACATTGAAGACATGGAAAAAGGAAAGGGGGACTCGATGCGAATTA
AAATACAAATAGATACTCAGCAACCGTTGCGAAGAGGCATGATGATCAAAATAGGCTCACACAGCGAAGAAGAATGGGTCGATATGAGGTTTGAAAAACTCCTTGATTTT
TGTTTTGGATGTGGCAAGATAGGACATCTATCCAAGGAGTGTGAAGACATCGAAGCGCTAAGTGAAGAAAAACTTCAGTATGGGCTGGGGCTAAAGAAAGACCCACCAGC
AAGAGTAAACTACAAGAACAGGAAAGGGTCACCAATGAAGAGAAACCCAAAGGAAAACCGAGAACCAGAAAAAGGAAGAGCCAAGGGGGGAAGACTGAAGAAAACAAAGG
TAATATGCAGAGAGAAGAACAATCAATTTTTCCGACCAACCGCCGGCAAAGAACCACGTCAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAAAAAGAGGAAAGCAGTAAAATAGAAGAACACATCATCAGTAACCAGCTCGAAAAGATGAAACTGACCGCAGAAGAAAAAGGTAAAGTGATGAAAATGGA
AGATGAAGAGCTACGAAAGAAAGTTCAAGATCTCGAGAATGTAGCGGTATGCAAAATAGCCACAGAAAAATATATCAATCCAGAAATATTCAAGTCTATGATACCCAAAA
TATGGCACTTGGAAGGCAAAGTTATAATAAAAAAAGCAGGGGAAAACATGTTTGAATGCACCTACAACTCAGTCAGAGACAAAAGGAAAATTATAGATGGAGGACCATGG
TTGTATGATGGTGCTCTCATATTATTTGAAGAAATAAAAGGAAACGAGAGATACTCACGGCTACAATTCAGGTACGCATCGTTCTGGATTCATTTCTTAGACTTACCAAG
AGTGTGTTTGAATAGGAAATGGGCGGAAGATCTAGGAAACACAGTGGGAAAGTTTGAAAAGCTAGACATTGAAGACATGGAAAAAGGAAAGGGGGACTCGATGCGAATTA
AAATACAAATAGATACTCAGCAACCGTTGCGAAGAGGCATGATGATCAAAATAGGCTCACACAGCGAAGAAGAATGGGTCGATATGAGGTTTGAAAAACTCCTTGATTTT
TGTTTTGGATGTGGCAAGATAGGACATCTATCCAAGGAGTGTGAAGACATCGAAGCGCTAAGTGAAGAAAAACTTCAGTATGGGCTGGGGCTAAAGAAAGACCCACCAGC
AAGAGTAAACTACAAGAACAGGAAAGGGTCACCAATGAAGAGAAACCCAAAGGAAAACCGAGAACCAGAAAAAGGAAGAGCCAAGGGGGGAAGACTGAAGAAAACAAAGG
TAATATGCAGAGAGAAGAACAATCAATTTTTCCGACCAACCGCCGGCAAAGAACCACGTCAGAAATAA
Protein sequenceShow/hide protein sequence
MEEEKEESSKIEEHIISNQLEKMKLTAEEKGKVMKMEDEELRKKVQDLENVAVCKIATEKYINPEIFKSMIPKIWHLEGKVIIKKAGENMFECTYNSVRDKRKIIDGGPW
LYDGALILFEEIKGNERYSRLQFRYASFWIHFLDLPRVCLNRKWAEDLGNTVGKFEKLDIEDMEKGKGDSMRIKIQIDTQQPLRRGMMIKIGSHSEEEWVDMRFEKLLDF
CFGCGKIGHLSKECEDIEALSEEKLQYGLGLKKDPPARVNYKNRKGSPMKRNPKENREPEKGRAKGGRLKKTKVICREKNNQFFRPTAGKEPRQK