| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 7.9e-192 | 37.32 | Show/hide |
Query: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
V SR+DRFLY+ NW F H+++ L RVTSDHFPIVLE+ WGP PF+ N L E F N+ WW++ QEG PG+SF+R+LKQL + I+ +R
Subjt: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
Query: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
N+ K EI IDRLE G L++++ +RT LK+D+ +E ++W Q+ K+ W+ EGDENT+FFHK
Subjt: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
Query: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +F DF
Subjt: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
Query: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
D+RPISLTT +Y+LIAK +AERLK ID+W+ +GFVIKLDIEKAF+K+
Subjt: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
Query: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
W F+D +L KGYP W P+ + Q + PF FVLAMDY+SR+L SV +K +KG L +++++HLLFADDIL
Subjt: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
Query: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
LFV+D++ + NL NII +F+L+SGL+IN NKS+I+ INV+ SR QIA+ WG T PI YLG PLGG + FW N +KI++KL SW+YS +SKG
Subjt: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
Query: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
G++TLI+++L+ +P Y LSIFKAP S C +I+K R+FLW ++ + LV+W K+ + E GGLG+ + + TN A KWLW S ++++
Subjt: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
Query: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
C S + I + L +R ++G FS FW H K ++ D W++T W L PRR
Subjt: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
Query: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
L + E AE +S G D +W +S G ++VAS ++ L P++ F NLWK IPKK FFIWT++Y +NT ++L +
Subjt: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
Query: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
+ PS C +C ++ H+FI C +A IWRS HL++ +N P++ +C+ + K +++ +++ + A+ LW IW ERN RIF +T
Subjt: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
Query: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
IWEDI LA W S + FSNYQASSIALN AF
Subjt: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
|
|
| KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.1e-184 | 36.06 | Show/hide |
Query: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
SRLDRFL++ W F H ++ L R TSDHFPIVLE+ WGP PFRF N L + D+ KNI+FWW +T Q G+ GYSF+RRLKQL IK W R+ +
Subjt: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
Query: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPT------------------------
++ K+ EI +ID+LE G T+ +KRT+LK+DL Q+++ E ++W Q+CK+ W+ EGDEN++FFHK T
Subjt: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPT------------------------
Query: -----------------SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
+ + NL+WCPIS + L +PF+E E++ LK+ NK+PGPDG+ ++F +KSW ++ ++ ++F DF
Subjt: -----------------SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
Query: ----------------KDFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKICWNF
DFRPISLTT +Y+LIAKTLA+RLK +DFW+ RGFVIKLDIEKAF+K+ W F
Subjt: ----------------KDFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKICWNF
Query: VDKILAFKGYPITWPKR----------------QNQGRKRHSS--RRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLN-SVSVSHLLFADDILLFV
+D +L K Y W K + +GR + S R+ D PF FVLAMDYLSR+L ++ K + G + +++++H+LFADDIL+FV
Subjt: VDKILAFKGYPITWPKR----------------QNQGRKRHSS--RRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLN-SVSVSHLLFADDILLFV
Query: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
+D D + NL I+ +FE +SGLNIN +KS+I INV R IA +WG P YLG PLGG PSSS FW N + KI +KL +W+YS +SKGGR+
Subjt: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
Query: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGS--
TLI +TL +P Y +S+FK P+ + I+ R+FLW+G +I L+ W+++ +P E GGLG+ TN A KWLW +RL+
Subjt: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGS--
Query: ----------ESFQQNIQP---IDRELSQLRRDSLPPERHGHQFS--------------SKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPLFDREAF
F N P + +S ++ G S + P F K +V + W+ +++ W L+ RPL D E
Subjt: ----------ESFQQNIQP---IDRELSQLRRDSLPPERHGHQFS--------------SKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPLFDREAF
Query: AQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQP-HSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSC
+S P P + G LWN +S F AS ++ +P P H ++ LWK PKK KFFIWT+I+ +NT DRLQ+ + L+P+
Subjt: AQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQP-HSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSC
Query: CPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITLA
C +C+ ++++H+FIHC + +W N P V + + +Q+ ++ + A ILW IW ERN RIF+ + ++WED +
Subjt: CPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITLA
Query: SFWASSTKAFSNYQASSIALNWKAFL
W+ +K FSNY SIALN AF+
Subjt: SFWASSTKAFSNYQASSIALNWKAFL
|
|
| KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.6e-182 | 35.71 | Show/hide |
Query: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
SRLDRFL+SP W F H ++ L R TSDHFPIVLE+ WGP PFRF N L + D+ +NI+FWW +T Q GF GYSF+RRLKQL IK W + +
Subjt: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
Query: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPT------------------------
+ K+ EI ID+LE G T+ KR +LK+DL Q+++ E ++W Q+CK+ W+ EGDEN++FFHK T
Subjt: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPT------------------------
Query: -----------------SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
+ + NL+WCPIS L +PF+E E++ LK+ NK+PGPDGFT++F +KSW ++ ++ ++F DF
Subjt: -----------------SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
Query: ----------------KDFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKICWNF
DFRPISLTT +Y+LIAK LA+RLK +DFW+ RGFVIKLDIEKAF+K+ W F
Subjt: ----------------KDFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKICWNF
Query: VDKILAFKGYPITW------------------PKRQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLN-SVSVSHLLFADDILLFV
+D +L K Y W + + + + R+ D PF FVLAMDYLS +L ++ +KG + G + +++++H+LFADDIL+FV
Subjt: VDKILAFKGYPITW------------------PKRQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLN-SVSVSHLLFADDILLFV
Query: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
+D + + NL I+ +FE +SGLNIN +KS+I INV R I +WG Q P YLG PLGG PSSS FW N + KI +KL SW+YS +SKGGR+
Subjt: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
Query: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGS--
TLI +TL +P Y LS+FK P+ + I+ R+FLW+G +I L+ W++V +P E GGLG+ TN A KWLW +RL+
Subjt: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGS--
Query: ----------ESFQQNIQP---IDRELSQLRRDSLPPERHGHQFS--------------SKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPLFDREAF
+ N P + +S ++ G S P F K +V D W+ + W ++ RPL D E
Subjt: ----------ESFQQNIQP---IDRELSQLRRDSLPPERHGHQFS--------------SKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPLFDREAF
Query: AQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSCC
+S P P G LW +S F AS ++ + +S H ++ LWK PKK KFFIWT+I+ +NT DRLQ+ + L+P+ C
Subjt: AQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSCC
Query: PLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITLAS
+C+ ++++H+FIHC + +W N P V + + +Q+ ++ + A +LW IW ERN RIF+ + + ++WEDI+
Subjt: PLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITLAS
Query: FWASSTKAFSNYQASSIALNWKAFL
W+ +K FSNY SIALN AF+
Subjt: FWASSTKAFSNYQASSIALNWKAFL
|
|
| KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 8.8e-183 | 35.95 | Show/hide |
Query: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLE--NPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
SR+DRFLY+P+W F H TR L R TSDHFP+V E NP+ RWGP PFR ++ L + DF +N+ WW+++ Q+G PGYSFI+RLK L + IK W++
Subjt: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLE--NPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
Query: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFH--------------------------
+ S K I E+ ID+ E L+ + +R +LK+DL ++S++E + W QR KK WL+EGDEN++FFH
Subjt: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFH--------------------------
Query: ---------------KGPT-SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ------
+GPT S+ + + NL W PI E +L PF E E+ + ++ K+PGPDGF + FFK W ++ +M++F DF+
Subjt: ---------------KGPT-SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ------
Query: -------------------KDFRPISLTTVLYRLIAKTLAERLKT-----------------------------IDFWKCSCTRGFVIKLDIEKAFEKIC
KDFRPISLTT +Y++IAKTL+ RLKT +DFWK +GF++KLDIEKAF+ +
Subjt: -------------------KDFRPISLTTVLYRLIAKTLAERLKT-----------------------------IDFWKCSCTRGFVIKLDIEKAFEKIC
Query: WNFVDKILAFKGYPITWPK------------------RQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLNS-VSVSHLLFADDIL
W+F+D +L K +PI W K Q + + R+ D PF FV+AMDYLSR+L +E G +KG S +S ++SH+LFADDIL
Subjt: WNFVDKILAFKGYPITWPK------------------RQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLNS-VSVSHLLFADDIL
Query: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
LF++DND L NL + +FE +SGL IN KS++ +NV + R + A+ WG + P+ YLG PLGGNP S FW+N +KI +KL++W+Y+ ISKG
Subjt: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
Query: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCG
GRLTLI++TLS +P Y LS+F+AP C +I+K R+FLW G + S L++W KV GGLG+ + VTN A KWLW + RRL+
Subjt: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCG
Query: SESFQQNIQPIDRELSQLRRDSLPPER--------------------------------HGHQFSSKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPL
+ + I P D + S P R G ++ P F K++TV DAW+ + W + RR L
Subjt: SESFQQNIQPIDRELSQLRRDSLPPER--------------------------------HGHQFSSKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPL
Query: FDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNA
DRE A+ P P + G+ W PDSK FS+ASA+ P S + +WK+ IP KIKFF+W +I R++NT + +Q +
Subjt: FDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNA
Query: LNPSCCPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTS--RTYINIW
L PS C LC S+ H+F+HC +W A + + + + + +++ + + A+ W IW ERNRRIF S +T N+W
Subjt: LNPSCCPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTS--RTYINIW
Query: EDIITLASFWASSTKAFSNYQASSIALNWKAF
E+ L W S F NY A++IALN F
Subjt: EDIITLASFWASSTKAFSNYQASSIALNWKAF
|
|
| XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | 2.3e-191 | 37.22 | Show/hide |
Query: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
V SR+DRFLY+ NW F H+++ L RVTSDHFPIVLE+ WGP PF+ N L E F N+ WW++ QEG PG+SF+R+LKQL + I+ +R
Subjt: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
Query: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
N+ K EI IDRLE G L++++ +RT LK+D+ +E ++W Q+ K+ W+ EGDENT+FFHK
Subjt: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
Query: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +F DF
Subjt: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
Query: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
D+RPISLTT +Y+LIAK +AERLK ID+W+ +GFVIKLDIEKAF+K+
Subjt: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
Query: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
W F+D +L KGYP W P+ + Q + PF FVLAMDY+SR+L SV +K +KG L +++++HLLFADDIL
Subjt: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
Query: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
LFV+D++ + NL NII +F+L+SGL+IN NKS+I+ INV+ SR QIA+ WG T PI YLG PLGG + FW N +KI++KL SW+YS +SKG
Subjt: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
Query: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
G++TLI+++L+ +P Y LSIFK P S C +I+K R+FLW ++ + LV+W K+ + E GGLG+ + + TN A KWLW S ++++
Subjt: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
Query: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
C S + I + L +R ++G FS FW H K ++ D W++T W L PRR
Subjt: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
Query: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
L + E AE +S G D +W +S G ++VAS ++ L P++ F NLWK IPKK FFIWT++Y +NT ++L +
Subjt: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
Query: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
+ PS C +C ++ H+FI C +A IWRS HL++ +N P++ +C+ + K +++ +++ + A+ LW IW ERN RIF +T
Subjt: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
Query: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
IWEDI LA W S + FSNYQASSIALN AF
Subjt: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein | 1.1e-191 | 37.22 | Show/hide |
Query: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
V SR+DRFLY+ NW F H+++ L RVTSDHFPIVLE+ WGP PF+ N L E F N+ WW++ QEG PG+SF+R+LKQL + I+ +R
Subjt: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
Query: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
N+ K EI IDRLE G L++++ +RT LK+D+ +E ++W Q+ K+ W+ EGDENT+FFHK
Subjt: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
Query: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +F DF
Subjt: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
Query: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
D+RPISLTT +Y+LIAK +AERLK ID+W+ +GFVIKLDIEKAF+K+
Subjt: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
Query: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
W F+D +L KGYP W P+ + Q + PF FVLAMDY+SR+L SV +K +KG L +++++HLLFADDIL
Subjt: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
Query: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
LFV+D++ + NL NII +F+L+SGL+IN NKS+I+ INV+ SR QIA+ WG T PI YLG PLGG + FW N +KI++KL SW+YS +SKG
Subjt: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
Query: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
G++TLI+++L+ +P Y LSIFK P S C +I+K R+FLW ++ + LV+W K+ + E GGLG+ + + TN A KWLW S ++++
Subjt: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
Query: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
C S + I + L +R ++G FS FW H K ++ D W++T W L PRR
Subjt: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
Query: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
L + E AE +S G D +W +S G ++VAS ++ L P++ F NLWK IPKK FFIWT++Y +NT ++L +
Subjt: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
Query: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
+ PS C +C ++ H+FI C +A IWRS HL++ +N P++ +C+ + K +++ +++ + A+ LW IW ERN RIF +T
Subjt: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
Query: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
IWEDI LA W S + FSNYQASSIALN AF
Subjt: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
|
|
| A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein | 1.0e-184 | 36.06 | Show/hide |
Query: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
SRLDRFL++ W F H ++ L R TSDHFPIVLE+ WGP PFRF N L + D+ KNI+FWW +T Q G+ GYSF+RRLKQL IK W R+ +
Subjt: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
Query: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPT------------------------
++ K+ EI +ID+LE G T+ +KRT+LK+DL Q+++ E ++W Q+CK+ W+ EGDEN++FFHK T
Subjt: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPT------------------------
Query: -----------------SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
+ + NL+WCPIS + L +PF+E E++ LK+ NK+PGPDG+ ++F +KSW ++ ++ ++F DF
Subjt: -----------------SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
Query: ----------------KDFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKICWNF
DFRPISLTT +Y+LIAKTLA+RLK +DFW+ RGFVIKLDIEKAF+K+ W F
Subjt: ----------------KDFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKICWNF
Query: VDKILAFKGYPITWPKR----------------QNQGRKRHSS--RRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLN-SVSVSHLLFADDILLFV
+D +L K Y W K + +GR + S R+ D PF FVLAMDYLSR+L ++ K + G + +++++H+LFADDIL+FV
Subjt: VDKILAFKGYPITWPKR----------------QNQGRKRHSS--RRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLN-SVSVSHLLFADDILLFV
Query: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
+D D + NL I+ +FE +SGLNIN +KS+I INV R IA +WG P YLG PLGG PSSS FW N + KI +KL +W+YS +SKGGR+
Subjt: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
Query: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGS--
TLI +TL +P Y +S+FK P+ + I+ R+FLW+G +I L+ W+++ +P E GGLG+ TN A KWLW +RL+
Subjt: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGS--
Query: ----------ESFQQNIQP---IDRELSQLRRDSLPPERHGHQFS--------------SKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPLFDREAF
F N P + +S ++ G S + P F K +V + W+ +++ W L+ RPL D E
Subjt: ----------ESFQQNIQP---IDRELSQLRRDSLPPERHGHQFS--------------SKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPLFDREAF
Query: AQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQP-HSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSC
+S P P + G LWN +S F AS ++ +P P H ++ LWK PKK KFFIWT+I+ +NT DRLQ+ + L+P+
Subjt: AQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQP-HSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSC
Query: CPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITLA
C +C+ ++++H+FIHC + +W N P V + + +Q+ ++ + A ILW IW ERN RIF+ + ++WED +
Subjt: CPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITLA
Query: SFWASSTKAFSNYQASSIALNWKAFL
W+ +K FSNY SIALN AF+
Subjt: SFWASSTKAFSNYQASSIALNWKAFL
|
|
| A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein | 4.2e-183 | 35.95 | Show/hide |
Query: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLE--NPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
SR+DRFLY+P+W F H TR L R TSDHFP+V E NP+ RWGP PFR ++ L + DF +N+ WW+++ Q+G PGYSFI+RLK L + IK W++
Subjt: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLE--NPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
Query: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFH--------------------------
+ S K I E+ ID+ E L+ + +R +LK+DL ++S++E + W QR KK WL+EGDEN++FFH
Subjt: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFH--------------------------
Query: ---------------KGPT-SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ------
+GPT S+ + + NL W PI E +L PF E E+ + ++ K+PGPDGF + FFK W ++ +M++F DF+
Subjt: ---------------KGPT-SEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ------
Query: -------------------KDFRPISLTTVLYRLIAKTLAERLKT-----------------------------IDFWKCSCTRGFVIKLDIEKAFEKIC
KDFRPISLTT +Y++IAKTL+ RLKT +DFWK +GF++KLDIEKAF+ +
Subjt: -------------------KDFRPISLTTVLYRLIAKTLAERLKT-----------------------------IDFWKCSCTRGFVIKLDIEKAFEKIC
Query: WNFVDKILAFKGYPITWPK------------------RQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLNS-VSVSHLLFADDIL
W+F+D +L K +PI W K Q + + R+ D PF FV+AMDYLSR+L +E G +KG S +S ++SH+LFADDIL
Subjt: WNFVDKILAFKGYPITWPK------------------RQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLNS-VSVSHLLFADDIL
Query: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
LF++DND L NL + +FE +SGL IN KS++ +NV + R + A+ WG + P+ YLG PLGGNP S FW+N +KI +KL++W+Y+ ISKG
Subjt: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
Query: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCG
GRLTLI++TLS +P Y LS+F+AP C +I+K R+FLW G + S L++W KV GGLG+ + VTN A KWLW + RRL+
Subjt: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCG
Query: SESFQQNIQPIDRELSQLRRDSLPPER--------------------------------HGHQFSSKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPL
+ + I P D + S P R G ++ P F K++TV DAW+ + W + RR L
Subjt: SESFQQNIQPIDRELSQLRRDSLPPER--------------------------------HGHQFSSKPLFFWQIHRKNMTVSDAWDHTTSSWKLYPRRPL
Query: FDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNA
DRE A+ P P + G+ W PDSK FS+ASA+ P S + +WK+ IP KIKFF+W +I R++NT + +Q +
Subjt: FDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNA
Query: LNPSCCPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTS--RTYINIW
L PS C LC S+ H+F+HC +W A + + + + + +++ + + A+ W IW ERNRRIF S +T N+W
Subjt: LNPSCCPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTS--RTYINIW
Query: EDIITLASFWASSTKAFSNYQASSIALNWKAF
E+ L W S F NY A++IALN F
Subjt: EDIITLASFWASSTKAFSNYQASSIALNWKAF
|
|
| A0A5A7US62 LINE-1 retrotransposable element ORF2 protein | 1.2e-182 | 36.68 | Show/hide |
Query: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
SRLDRFL S W F H +R L R SDHFPI+LE+P+ +WGPCPFR +N L +K+F KN WW S+ Q GFPGY+FI+ L L IK W+ N
Subjt: SRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRNNR
Query: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK---------------------------
+L + K+ + EI ID+LE G ++ QKR SLKSDL + + ++W QR ++ W GDEN ++FH+
Subjt: DLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK---------------------------
Query: --------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
+ E ++ NL+W PIS + L +PF E E+ + + + K+PGPDG+T+ F+KK W ++ ++ VF DF +
Subjt: --------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQ---------
Query: ----------------KDFRPISLTTVLYRLIAKTLAERLKT-----------------------------IDFWKCSCTRGFVIKLDIEKAFEKICWNF
D+RPISLTT LY+++AK LA RLK+ ID WK +GFV+KLDIEKAF+KI W+F
Subjt: ----------------KDFRPISLTTVLYRLIAKTLAERLKT-----------------------------IDFWKCSCTRGFVIKLDIEKAFEKICWNF
Query: VDKILAFKGYPITWPK------------------RQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLNS-VSVSHLLFADDILLFV
+D +LA K +P W K + + + R+ D PF FVLAMDYLSR+L +E KG +KG S N+ ++SHLLFADD+L+FV
Subjt: VDKILAFKGYPITWPK------------------RQNQGRKRHSSRRSD--LPFYFVLAMDYLSRILQSVEQKGLVKGCSLNS-VSVSHLLFADDILLFV
Query: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
+DN+ L NL + +FE +SGL N +KS+I+ IN+ R QIA+ +G T P+ YLG PLGGNP S FW TI+ IH+KL+ W+YS ISKGGRL
Subjt: QDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKGGRL
Query: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGSES
TL++A+LS +P Y LS FKAP SV I+K R FLW G + + L++W+ +P E GGLG+ K + TN A KWLW +S ++ C
Subjt: TLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLLCGSES
Query: FQQNIQ---PIDRELSQLRRDSLPPERHGHQFSSK---------PLFFW------------QIHR-------KNMTVSDAWDHTTSSWKLYPRRPLFDRE
+ +N Q P+ S ++ + SK L FW QI R ++ TV + WD + W + PRRPL +RE
Subjt: FQQNIQ---PIDRELSQLRRDSLPPERHGHQFSSK---------PLFFW------------QIHR-------KNMTVSDAWDHTTSSWKLYPRRPLFDRE
Query: AFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPS
S P + G WNP +++VASA+ + SS + +LW++ IP+K KFFIWT+++++LNT D +Q+ S +LNPS
Subjt: AFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPS
Query: CCPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITL
C C + +++++H+FI C A +W + TG M + V +CL+ + + I+ + A A LW IW RN IF + +Y+N WEDI TL
Subjt: CCPLCHAGSDELDHIFIHCGVASDIWRSFHLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRTYINIWEDIITL
Query: ASFWASSTKAFSNYQASSIALNWKA
W+S +K NY ++IALN KA
Subjt: ASFWASSTKAFSNYQASSIALNWKA
|
|
| A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein | 3.8e-192 | 37.32 | Show/hide |
Query: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
V SR+DRFLY+ NW F H+++ L RVTSDHFPIVLE+ WGP PF+ N L E F N+ WW++ QEG PG+SF+R+LKQL + I+ +R
Subjt: VKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWESTYQEGFPGYSFIRRLKQLVSSIKLWKRN
Query: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
N+ K EI IDRLE G L++++ +RT LK+D+ +E ++W Q+ K+ W+ EGDENT+FFHK
Subjt: NRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHK-------------------------
Query: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +F DF
Subjt: -----------------GPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHDFFQK-----
Query: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
D+RPISLTT +Y+LIAK +AERLK ID+W+ +GFVIKLDIEKAF+K+
Subjt: --------------------DFRPISLTTVLYRLIAKTLAERLK-----------------------------TIDFWKCSCTRGFVIKLDIEKAFEKIC
Query: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
W F+D +L KGYP W P+ + Q + PF FVLAMDY+SR+L SV +K +KG L +++++HLLFADDIL
Subjt: WNFVDKILAFKGYPITW--------------------PKRQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSL-NSVSVSHLLFADDIL
Query: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
LFV+D++ + NL NII +F+L+SGL+IN NKS+I+ INV+ SR QIA+ WG T PI YLG PLGG + FW N +KI++KL SW+YS +SKG
Subjt: LFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSSSPFWANTIDKIHRKLDSWRYSYISKG
Query: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
G++TLI+++L+ +P Y LSIFKAP S C +I+K R+FLW ++ + LV+W K+ + E GGLG+ + + TN A KWLW S ++++
Subjt: GRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW------SSFMRRLL--
Query: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
C S + I + L +R ++G FS FW H K ++ D W++T W L PRR
Subjt: -------------CGSESFQQNIQPIDRELSQLRRDSLPPERHGHQFSSKPLFFWQIH-------------------RKNMTVSDAWDHTTSSWKLYPRR
Query: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
L + E AE +S G D +W +S G ++VAS ++ L P++ F NLWK IPKK FFIWT++Y +NT ++L +
Subjt: PLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDR---PQPHSIIFSNLWKALIPKKIKFFIWTVIYRRLNTTDRLQRI
Query: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
+ PS C +C ++ H+FI C +A IWRS HL++ +N P++ +C+ + K +++ +++ + A+ LW IW ERN RIF +T
Subjt: FKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIWRSF--HLATGINMPIPRQVNWICLETFAAKATSQREILIQSMAAAILWVIWGERNRRIFQNTSRT
Query: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
IWEDI LA W S + FSNYQASSIALN AF
Subjt: YINIWEDIITLASFWASSTKAFSNYQASSIALNWKAF
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 1.1e-15 | 21.06 | Show/hide |
Query: EATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVF----------HDFFQ----------------KDFRPISLTTVLYRLIA
E SL +P + E+ + ++ KSPGPDGFT EF+++ + P ++++F + F++ ++FRPISL + +++
Subjt: EATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVF----------HDFFQ----------------KDFRPISLTTVLYRLIA
Query: KTLAERLKT----------------IDFW--------------KCSCTRGFVIKLDIEKAFEKICWNFVDKILAFKGYPITWPK----------------
K LA R++ + W + +I +D EKAF+KI F+ K L G + K
Subjt: KTLAERLKT----------------IDFW--------------KCSCTRGFVIKLDIEKAFEKICWNFVDKILAFKGYPITWPK----------------
Query: -RQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGIN
++ + + R P +L L + +++ Q+ +KG L V LFADD+++++++ NL +I F SG IN KS N
Subjt: -RQNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGIN
Query: VEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSS--SPFWANTIDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSI--FKAPQSVCFSIDKII
+QI I YLG L + + + +I + W+ S GR+ +++ + Y + K P + ++K
Subjt: VEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSS--SPFWANTIDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSI--FKAPQSVCFSIDKII
Query: RSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGL--FKTRVTNSAFQVKWLW
F+W+ + + ++S +AGG+ L FK + + W W
Subjt: RSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGL--FKTRVTNSAFQVKWLW
|
|
| P08548 LINE-1 reverse transcriptase homolog | 7.3e-15 | 20.88 | Show/hide |
Query: ISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHD----------FFQ----------------KDFRPISLTTVLY
+S E L +P S E+ ++ + KSPGPDGFT EF++ + P ++ +F + F++ +++RPISL +
Subjt: ISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFHD----------FFQ----------------KDFRPISLTTVLY
Query: RLIAKTLAERLK----------TIDF------W--------------KCSCTRGFVIKLDIEKAFEKICWNFVDKILAFKGYPITWPKR-----------
+++ K L R++ + F W K ++ +D EKAF+ I F+ + L G T+ K
Subjt: RLIAKTLAERLK----------TIDF------W--------------KCSCTRGFVIKLDIEKAFEKICWNFVDKILAFKGYPITWPKR-----------
Query: ------QNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSI
+ + S R P +L + + ++ ++ +KG + S + LFADD+++++++ L +IK + SG IN +KS
Subjt: ------QNQGRKRHSSRRSDLPFYFVLAMDYLSRILQSVEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSI
Query: TGINVEDSRVAQIAANWGCPTTQFP--IPYLGSPLGGNPSS--SPFWANTIDKIHRKLDSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQSVCF
++ A+ P T P + YLG L + + +I ++ W+ S GR+ +++ ++ I N+ KAP S
Subjt: TGINVEDSRVAQIAANWGCPTTQFP--IPYLGSPLGGNPSS--SPFWANTIDKIHRKLDSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQSVCF
Query: SIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW
++KII F+W+ + P ++ ++ +AGG+ L R+ + +K W
Subjt: SIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAFQVKWLW
|
|
| P0C2F6 Putative ribonuclease H protein At1g65750 | 5.2e-21 | 24.51 | Show/hide |
Query: IDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAF--Q
++++ ++ WR +S GRLTL +A LS +P + +S PQS+ +D++ R+FLW + LV W KV +P + GGLG+ + N A +
Subjt: IDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLGLFKTRVTNSAF--Q
Query: VKW--------LWSSFMR-----------RLLCGSESFQQNIQPID---RELSQLRRDSLPPERHGHQF------SSKPLFFWQIHRK-----NMTVSDA
V W LW+ ++ R L S+ + I R++ +P + +F S KPL + + D
Subjt: VKW--------LWSSFMR-----------RLLCGSESFQQNIQPID---RELSQLRRDSLPPERHGHQF------SSKPLFFWQIHRK-----NMTVSDA
Query: W------------DHTTSSWKLYPRRPLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSN-LWKALIP
W +TT++ +L R + D ++G D + W G+FSV SA Y L+ + P+P+ F N LWK +P
Subjt: W------------DHTTSSWKLYPRRPLFDREAFAQAECASSFPIPALSGGADHMLWNPDSKGRFSVASARQFYWNLSSPDRPQPHSIIFSN-LWKALIP
Query: KKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIW
+++K F+W V + + T + R S + + C +C G + + H+ C IW
Subjt: KKIKFFIWTVIYRRLNTTDRLQRIFKSNALNPSCCPLCHAGSDELDHIFIHCGVASDIW
|
|
| P11369 LINE-1 retrotransposable element ORF2 protein | 8.9e-13 | 21.28 | Show/hide |
Query: LTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGF
L +++ ++ + +D ++ IR + +R T L+ DE F + + V LN + L P S E+ + ++ KSPGPDGF
Subjt: LTDQMCQKRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFHKGPTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGF
Query: TVEFFKKSWIAIRPSVMEVFH----------DFF----------QKD------FRPISLTTVLYRLIAKTLAERLKT----------------IDFW---
+ EF++ + P + ++FH F+ QKD FRPISL + +++ K LA R++ + W
Subjt: TVEFFKKSWIAIRPSVMEVFH----------DFF----------QKD------FRPISLTTVLYRLIAKTLAERLKT----------------IDFW---
Query: -----------KCSCTRGFVIKLDIEKAFEKICWNFVDKILAFKG------------YPITWPKRQNQGRKRH-----SSRRSDLPFYFVLAMDYLSRIL
K +I LD EKAF+KI F+ K+L G Y + G K S R P L L +
Subjt: -----------KCSCTRGFVIKLDIEKAFEKICWNFVDKILAFKG------------YPITWPKRQNQGRKRH-----SSRRSDLPFYFVLAMDYLSRIL
Query: QSVEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGN
+++ Q+ +KG + V L ADD+++++ D L N+I F G IN NKS +I I YLG L
Subjt: QSVEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFNKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGN
Query: PSS--SPFWANTIDKIHRKLDSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLG
+ + +I L W+ S GR+ +++ + I + K P ++ I F+W+ + + L+ + + I L
Subjt: PSS--SPFWANTIDKIHRKLDSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGQDQSSSIPLVSWDKVAAPIEAGGLG
Query: LFKTRVTNSAFQVKWLW
L+ + + W W
Subjt: LFKTRVTNSAFQVKWLW
|
|
| P14381 Transposon TX1 uncharacterized 149 kDa protein | 6.6e-08 | 22.99 | Show/hide |
Query: VVKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGP--CPFRFDNYLLHEKDFTKNIKFWWES--TYQEGFP--------GYSFIRRL
V +SR+DR S + + Q T RL SDH + L P + F+N LL ++ F K+++ W +Q+ F G ++ L
Subjt: VVKSRLDRFLYSPNWALKFQDHHTRRLGRVTSDHFPIVLENPEFRWGP--CPFRFDNYLLHEKDFTKNIKFWWES--TYQEGFP--------GYSFIRRL
Query: KQLVSSIKLWKRNNRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQ-KRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFH-----KGPTSEG
Q + +RN + + ++ E+ +D + L G DQ Q + K L + ++ R R + L + D + FF+ KG +
Subjt: KQLVSSIKLWKRNNRDLLKSRKQIISDEIAKIDRLENLGGLTDQMCQ-KRTSLKSDLHQVSMQEIRLWKQRCKKTWLKEGDENTTFFH-----KGPTSEG
Query: WMVSNLNWCPISGPEA--------------------------------------TSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSV
+ + P+ PEA L P + E+ Q L+ M HNKSPG DG T+EFF+ W + P
Subjt: WMVSNLNWCPISGPEA--------------------------------------TSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSV
Query: MEVFHDFFQ-------------------------KDFRPISLTTVLYRLIAKTLAERLKTI
V + F+ K++RP+SL + Y+++AK ++ RLK++
Subjt: MEVFHDFFQ-------------------------KDFRPISLTTVLYRLIAKTLAERLKTI
|
|
