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Lag0017528 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017528
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr5:4904781..4906168
RNA-Seq ExpressionLag0017528
SyntenyLag0017528
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY81140.1 hypothetical protein Acr_01g0009490 [Actinidia rufa]2.0e-0827.52Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGNEEAALVAITAGLEDERLLNSIGASTNGDPKYGPP---------------EFPKEDEVSADRRDK
        ++ L+ Q +PPFT  +++A V  +FK+PT         + L  I    E ERL + +        +   P               ++P++ +    RR+K
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGNEEAALVAITAGLEDERLLNSIGASTNGDPKYGPP---------------EFPKEDEVSADRRDK

Query:  SQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPRPRLTRDGR
         +YC  HWDH H+T +C QLK+ I  LI+  +L+++V+  +  ++ + R
Subjt:  SQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPRPRLTRDGR

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]3.1e-0950Show/hide
Query:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR
        ++P+    S+ +R K +YCL HWDHGH+T++C  LK+E+E LI   YLKE+V EP+
Subjt:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR

XP_022152370.1 uncharacterized protein LOC111020115 [Momordica charantia]3.8e-0751.85Show/hide
Query:  PKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR
        P++     ++R+K +YCL H DHGHST NC +LK +IE LIQ++Y K+FV +PR
Subjt:  PKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.9e-0848.21Show/hide
Query:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR
        ++P+  + S+ +R K +YCL H DHGH+T++C  LK+E+E LI+  YLKE+V EP+
Subjt:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.2e-0249.02Show/hide
Query:  RNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYD
        R    + + S   K  D+EEL+DQ D PFTEE+M+ +VP KFK+PT K +D
Subjt:  RNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYD

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.9e-0750.82Show/hide
Query:  EDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVS-EPRPRLTRDGR
        +DE++ D RD+S+YC  H DHGH+T +C  L+ EIEALI+  +LK +V  + RPR  RD R
Subjt:  EDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVS-EPRPRLTRDGR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.5e-0950Show/hide
Query:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR
        ++P+    S+ +R K +YCL HWDHGH+T++C  LK+E+E LI   YLKE+V EP+
Subjt:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR

A0A6J1DDR5 uncharacterized protein LOC1110201151.8e-0751.85Show/hide
Query:  PKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR
        P++     ++R+K +YCL H DHGHST NC +LK +IE LIQ++Y K+FV +PR
Subjt:  PKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR

A0A6J1DWY0 uncharacterized protein LOC1110252932.8e-0848.21Show/hide
Query:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR
        ++P+  + S+ +R K +YCL H DHGH+T++C  LK+E+E LI+  YLKE+V EP+
Subjt:  EFPKEDEVSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPR

A0A6J1DWY0 uncharacterized protein LOC1110252931.0e-0249.02Show/hide
Query:  RNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYD
        R    + + S   K  D+EEL+DQ D PFTEE+M+ +VP KFK+PT K +D
Subjt:  RNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYD

A0A6J1DWY0 uncharacterized protein LOC1110252936.3e-0832.33Show/hide
Query:  DMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDG-------NEEAALVAITAGLEDERLLNSIGASTNGDPKYGPP-EFPKEDEVSADRRDKSQYCLL
        +++ LI + + PF + V    +P KFKVP  + +DG        +    V    G+ DE +  +   +  G  +  P  ++P     S  RR K  YC  
Subjt:  DMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDG-------NEEAALVAITAGLEDERLLNSIGASTNGDPKYGPP-EFPKEDEVSADRRDKSQYCLL

Query:  HWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSE
        H DHGH+T +   LK+ IEALI+   LK+FV +
Subjt:  HWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSE

A0A7J0E3Z6 Uncharacterized protein9.7e-0927.52Show/hide
Query:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGNEEAALVAITAGLEDERLLNSIGASTNGDPKYGPP---------------EFPKEDEVSADRRDK
        ++ L+ Q +PPFT  +++A V  +FK+PT         + L  I    E ERL + +        +   P               ++P++ +    RR+K
Subjt:  MEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGNEEAALVAITAGLEDERLLNSIGASTNGDPKYGPP---------------EFPKEDEVSADRRDK

Query:  SQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPRPRLTRDGR
         +YC  HWDH H+T +C QLK+ I  LI+  +L+++V+  +  ++ + R
Subjt:  SQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPRPRLTRDGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCCATGGAGCACAATGCAGAATCAGAGACGAGATCAAGGGAAAGAGACTGACAGCGTGACCAGCAAGATCATGGGGCTCAAACCTGCTGATCGTACAATTTTGAG
AAGCCCAGAGTCAAGCACACTTAAGGGACGTGACTACACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAAAAGCGCAGAATGA
CCAAAACTGCCGAGTCCGAGGCCAAAGCTGCAGAAGCCGAAGCCAGGGCTGCGAGGCGAGGACAGAGCAGCCGAGGCGAGGCTAGATTGGCTAAGGTCGAGGCCAAGAAA
GACAATCTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTAGAAATCCACAAGGAGACCTGCAGAAGTCAAAGGACTCAAAAGAGCAAGACATGGAAGAACT
AATCGACCAAGTCGACCCACCTTTCACAGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGCAATGAGGAAGCAGCCC
TAGTAGCCATCACAGCCGGATTGGAGGATGAGAGACTGCTCAATTCAATAGGAGCAAGTACTAATGGAGATCCGAAATACGGGCCTCCTGAATTTCCCAAGGAGGATGAA
GTGAGTGCCGATAGAAGAGACAAGAGCCAATATTGCCTTCTCCATTGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAGATCGAAGCACTGATCCA
GAATGAGTATTTGAAAGAGTTCGTCAGTGAGCCAAGGCCGAGGCTGACCAGGGATGGCCGAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCCATGGAGCACAATGCAGAATCAGAGACGAGATCAAGGGAAAGAGACTGACAGCGTGACCAGCAAGATCATGGGGCTCAAACCTGCTGATCGTACAATTTTGAG
AAGCCCAGAGTCAAGCACACTTAAGGGACGTGACTACACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAAAAGCGCAGAATGA
CCAAAACTGCCGAGTCCGAGGCCAAAGCTGCAGAAGCCGAAGCCAGGGCTGCGAGGCGAGGACAGAGCAGCCGAGGCGAGGCTAGATTGGCTAAGGTCGAGGCCAAGAAA
GACAATCTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTAGAAATCCACAAGGAGACCTGCAGAAGTCAAAGGACTCAAAAGAGCAAGACATGGAAGAACT
AATCGACCAAGTCGACCCACCTTTCACAGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGCAATGAGGAAGCAGCCC
TAGTAGCCATCACAGCCGGATTGGAGGATGAGAGACTGCTCAATTCAATAGGAGCAAGTACTAATGGAGATCCGAAATACGGGCCTCCTGAATTTCCCAAGGAGGATGAA
GTGAGTGCCGATAGAAGAGACAAGAGCCAATATTGCCTTCTCCATTGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAGATCGAAGCACTGATCCA
GAATGAGTATTTGAAAGAGTTCGTCAGTGAGCCAAGGCCGAGGCTGACCAGGGATGGCCGAGGCTAA
Protein sequenceShow/hide protein sequence
MSPWSTMQNQRRDQGKETDSVTSKIMGLKPADRTILRSPESSTLKGRDYTVSTPSYGHTKTDLRNLIEEKRRMTKTAESEAKAAEAEARAARRGQSSRGEARLAKVEAKK
DNLPWKTELLNTLKELRNPQGDLQKSKDSKEQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGNEEAALVAITAGLEDERLLNSIGASTNGDPKYGPPEFPKEDE
VSADRRDKSQYCLLHWDHGHSTRNCIQLKDEIEALIQNEYLKEFVSEPRPRLTRDGRG