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Lag0017553 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017553
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein YABBY 4-like
Genome locationchr5:5300588..5301326
RNA-Seq ExpressionLag0017553
SyntenyLag0017553
Gene Ontology termsGO:0009944 - polarity specification of adaxial/abaxial axis (biological process)
GO:0010154 - fruit development (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:1902183 - regulation of shoot apical meristem development (biological process)
GO:2000024 - regulation of leaf development (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006780 - YABBY protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028372.1 Protein YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-4174.8Show/hide
Query:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHS---FS-NAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL
        PP  SD LCYVHC++C+T+LAVSVP ASLFKTVTVRCGHCANLLPVNM GGMLL S N FH    FS NAHN +EEIS      NPNPNF+ NQTDGIDL
Subjt:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHS---FS-NAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL

Query:  TMATRVANDIPRQPPSINRREII
         MATRV ND+PR PPSINRREII
Subjt:  TMATRVANDIPRQPPSINRREII

TYK19491.1 protein YABBY 4-like [Cucumis melo var. makuwa]3.6e-4269.06Show/hide
Query:  MSSSSLP------PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNP
        MSSSSLP      P PSD+LCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPV+M GGMLL S +QFH F+        N HN +EEIS      
Subjt:  MSSSSLP------PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNP

Query:  NPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII
        NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INRREII
Subjt:  NPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII

XP_004150647.1 protein YABBY 4 isoform X2 [Cucumis sativus]9.0e-4170.63Show/hide
Query:  SSLPPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNPNPNPNFLFN
        S LPP PSD+LCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPVNM GGMLL S +QFH F+        N HN +EEIS      NPNPNFL N
Subjt:  SSLPPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNPNPNPNFLFN

Query:  QTDGIDLTMATRVANDIPRQPPSINR
        QT+GIDLTMATRV ND+PRQPP+INR
Subjt:  QTDGIDLTMATRVANDIPRQPPSINR

XP_038876835.1 protein YABBY 4-like isoform X1 [Benincasa hispida]1.1e-4169.34Show/hide
Query:  MSSSSL--------PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNP
        MSSSS         PPSPSD++CYVHC+IC+TILAVSVPS SLFK VTVRCG+CANLLPVNM GGM L S+NQFH F+        N HN +EEIS    
Subjt:  MSSSSL--------PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNP

Query:  NPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
          NPNPNFL NQT+GIDLTMATRVAND+PRQPPSINR
Subjt:  NPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

XP_038876836.1 protein YABBY 4-like isoform X2 [Benincasa hispida]1.1e-4169.34Show/hide
Query:  MSSSSL--------PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNP
        MSSSS         PPSPSD++CYVHC+IC+TILAVSVPS SLFK VTVRCG+CANLLPVNM GGM L S+NQFH F+        N HN +EEIS    
Subjt:  MSSSSL--------PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNP

Query:  NPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
          NPNPNFL NQT+GIDLTMATRVAND+PRQPPSINR
Subjt:  NPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

TrEMBL top hitse value%identityAlignment
A0A0A0L1N8 Uncharacterized protein4.3e-4170.63Show/hide
Query:  SSLPPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNPNPNPNFLFN
        S LPP PSD+LCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPVNM GGMLL S +QFH F+        N HN +EEIS      NPNPNFL N
Subjt:  SSLPPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNPNPNPNFLFN

Query:  QTDGIDLTMATRVANDIPRQPPSINR
        QT+GIDLTMATRV ND+PRQPP+INR
Subjt:  QTDGIDLTMATRVANDIPRQPPSINR

A0A1S4DXY3 protein YABBY 4-like2.2e-4068.15Show/hide
Query:  MSSSSLP------PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNP
        MSSSSLP      P PSD+LCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPV+M GGMLL S +QFH F+        N HN +EEIS      
Subjt:  MSSSSLP------PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNP

Query:  NPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INR
Subjt:  NPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

A0A5D3D7E7 Protein YABBY 4-like1.8e-4269.06Show/hide
Query:  MSSSSLP------PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNP
        MSSSSLP      P PSD+LCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPV+M GGMLL S +QFH F+        N HN +EEIS      
Subjt:  MSSSSLP------PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFS--------NAHNSMEEISNPNPNP

Query:  NPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII
        NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INRREII
Subjt:  NPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII

A0A6J1G5H6 protein YABBY 4-like8.2e-4073.95Show/hide
Query:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHS---FS-NAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL
        PP  SD LCYVHC++C+T+LAVSVP ASLFKTVTVRCGHCANLLPVNM GGMLL S N FH    FS NAHN +EEIS      NPNPNF+ NQTDGIDL
Subjt:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHS---FS-NAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL

Query:  TMATRVANDIPRQPPSINR
         MATRV ND+PR PPSINR
Subjt:  TMATRVANDIPRQPPSINR

A0A6J1KZK7 protein YABBY 4-like isoform X16.9e-3969.35Show/hide
Query:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSF---------SNAHNSMEEISNPNPNPNPNPNFLFNQT
        PP  SD LCYVHC+IC+T+LAVSVP ASLFKTVTVRCGHCANLLPVNM GGMLL S N FH+F          NAHN +EEIS      NPNPNF  NQT
Subjt:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSF---------SNAHNSMEEISNPNPNPNPNPNFLFNQT

Query:  DGIDLTMATRVANDIPRQPPSINR
        DGIDLTM TRV ND+PR P +INR
Subjt:  DGIDLTMATRVANDIPRQPPSINR

SwissProt top hitse value%identityAlignment
A2X7Q3 Protein YABBY 42.7e-1651.14Show/hide
Query:  PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGML----LSSTNQFH------SFSNAHNSMEEISNPNPN
        PSP+++LCYVHC+ C+TILAV VP +SLFKTVTVRCGHCANLL VN+ G +L     +  NQ H      S ++ H  ++E++   P+
Subjt:  PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGML----LSSTNQFH------SFSNAHNSMEEISNPNPN

O22152 Axial regulator YABBY 11.4e-1544.54Show/hide
Query:  SPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQF------HSFSNAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL
        SPSD LCYV C+ C TILAV+VP  SLFKTVTVRCG C NLL VNM    +L ++NQ       HS+ N  + +EE+ +   N N          + I  
Subjt:  SPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQF------HSFSNAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL

Query:  TMATRVANDIPRQPPSINR
         M     ++IP+ PP +NR
Subjt:  TMATRVANDIPRQPPSINR

Q01JG2 Protein YABBY 56.7e-1562.9Show/hide
Query:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGML---LSSTNQ
        P +  ++LCYVHC+ C+TILAV VP +SLFKTVTVRCGHCANLL VN+ G +L    S+ NQ
Subjt:  PPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGML---LSSTNQ

Q6H668 Protein YABBY 42.7e-1651.14Show/hide
Query:  PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGML----LSSTNQFH------SFSNAHNSMEEISNPNPN
        PSP+++LCYVHC+ C+TILAV VP +SLFKTVTVRCGHCANLL VN+ G +L     +  NQ H      S ++ H  ++E++   P+
Subjt:  PSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGML----LSSTNQFH------SFSNAHNSMEEISNPNPN

Q9XFB1 Axial regulator YABBY 39.4e-1750.47Show/hide
Query:  MSSSSLPPSP------SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLL--PVNMHGGMLLSSTNQFHSFSNAHNSMEEISNPNPNPNPNPNF
        MSSSS P  P      +D+LCYVHC  C+T+LAVSVP +SLFKTVTVRCGHC+NLL   V+M   +L S +N  HSF            P P P P PN 
Subjt:  MSSSSLPPSP------SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLL--PVNMHGGMLLSSTNQFHSFSNAHNSMEEISNPNPNPNPNPNF

Query:  LFNQTDG
        L     G
Subjt:  LFNQTDG

Arabidopsis top hitse value%identityAlignment
AT1G08465.1 Plant-specific transcription factor YABBY family protein5.5e-1238.32Show/hide
Query:  SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFSNAHNSMEEISNPNPNPNPNPNFLFNQTDGIDLTMATRVAN
        S+++CYVHC  C TILAVSVP ASLF  VTVRCGHC NLL +N+   +  +S    H     H           +   +     N ++ ID         
Subjt:  SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFSNAHNSMEEISNPNPNPNPNPNFLFNQTDGIDLTMATRVAN

Query:  DIPRQPP
        + PR PP
Subjt:  DIPRQPP

AT2G26580.1 plant-specific transcription factor YABBY family protein2.1e-1150Show/hide
Query:  SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFSNA
        +++LCY+ C+ CN ILAV+VP +SLF  VTVRCGHC NL  VNM   +   S   F + + A
Subjt:  SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFSNA

AT2G26580.2 plant-specific transcription factor YABBY family protein2.1e-1150Show/hide
Query:  SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFSNA
        +++LCY+ C+ CN ILAV+VP +SLF  VTVRCGHC NL  VNM   +   S   F + + A
Subjt:  SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFSNA

AT2G45190.1 Plant-specific transcription factor YABBY family protein9.6e-1744.54Show/hide
Query:  SPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQF------HSFSNAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL
        SPSD LCYV C+ C TILAV+VP  SLFKTVTVRCG C NLL VNM    +L ++NQ       HS+ N  + +EE+ +   N N          + I  
Subjt:  SPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQF------HSFSNAHNSMEEISNPNPNPNPNPNFLFNQTDGIDL

Query:  TMATRVANDIPRQPPSINR
         M     ++IP+ PP +NR
Subjt:  TMATRVANDIPRQPPSINR

AT4G00180.1 Plant-specific transcription factor YABBY family protein6.7e-1850.47Show/hide
Query:  MSSSSLPPSP------SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLL--PVNMHGGMLLSSTNQFHSFSNAHNSMEEISNPNPNPNPNPNF
        MSSSS P  P      +D+LCYVHC  C+T+LAVSVP +SLFKTVTVRCGHC+NLL   V+M   +L S +N  HSF            P P P P PN 
Subjt:  MSSSSLPPSP------SDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLL--PVNMHGGMLLSSTNQFHSFSNAHNSMEEISNPNPNPNPNPNF

Query:  LFNQTDG
        L     G
Subjt:  LFNQTDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTTCTTCCCTTCCTCCTTCTCCTTCTGATAAGCTCTGTTATGTCCATTGCGACATTTGCAACACCATCCTGGCGGTGAGTGTTCCTTCTGCTAGTTTGTTCAA
AACGGTCACCGTCCGTTGCGGCCACTGCGCCAATCTTCTACCGGTGAACATGCATGGTGGCATGCTTCTCTCTTCTACAAATCAATTTCACAGCTTTTCCAATGCTCACA
ATTCCATGGAAGAGATCTCTAATCCAAATCCAAATCCAAATCCAAATCCAAATTTTCTGTTCAATCAAACAGATGGAATTGATTTGACCATGGCGACTCGAGTAGCCAAC
GATATTCCAAGGCAACCCCCAAGCATAAATAGACGTGAGATAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTTCTTCCCTTCCTCCTTCTCCTTCTGATAAGCTCTGTTATGTCCATTGCGACATTTGCAACACCATCCTGGCGGTGAGTGTTCCTTCTGCTAGTTTGTTCAA
AACGGTCACCGTCCGTTGCGGCCACTGCGCCAATCTTCTACCGGTGAACATGCATGGTGGCATGCTTCTCTCTTCTACAAATCAATTTCACAGCTTTTCCAATGCTCACA
ATTCCATGGAAGAGATCTCTAATCCAAATCCAAATCCAAATCCAAATCCAAATTTTCTGTTCAATCAAACAGATGGAATTGATTTGACCATGGCGACTCGAGTAGCCAAC
GATATTCCAAGGCAACCCCCAAGCATAAATAGACGTGAGATAATTTAA
Protein sequenceShow/hide protein sequence
MSSSSLPPSPSDKLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLSSTNQFHSFSNAHNSMEEISNPNPNPNPNPNFLFNQTDGIDLTMATRVAN
DIPRQPPSINRREII