CuGenDBv2

Gene ID	Lag0017569
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Copper ion binding protein
Genome location	chr5:5466060..5469396
RNA-Seq Expression	Lag0017569
Synteny	Lag0017569
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577605.1 hypothetical protein SDJN03_25179, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-81

84.86

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Query:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESE
        SLPRSIMGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSGMLKGSTSDGWPHQ+PPLFLP+IPP+HSAN E DAIRS+LQESE
Subjt:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESE

Query:  RVVEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK
        RVVEKLQK EDNM+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++  SSVEK
Subjt:  RVVEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK

XP_008448899.1 PREDICTED: uncharacterized protein LOC103490925 [Cucumis melo]

6.9e-80

84.53

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDT+KPKRKPRRNR+KVPQESK    KVD K+ SDDSG LKGSTSDGWPHQ PPLFLP+IPP+H ANAE DAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV

Query:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK EDNML+EVTQRAKDLHDKEFKLPYQKPMPC+AES+ACFQCYK++PND LKCARLVKNF +CNRQARQ++SS EK
Subjt:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

XP_022152722.1 uncharacterized protein LOC111020378 [Momordica charantia]

3.7e-81

86.19

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV
        MGDFSIQISSNLV+ML+DDTEKPKRKPRRNRTKVPQESK    KVD KH S DSGMLKGSTSDGWPHQ PPLFLPVIPP+HSAN E DAIRSVL+ESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV

Query:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VE+LQK E+NM+QEVTQRAKDLHD+EFKLPYQKPMPCLAES ACFQCYK++ NDLLKCAR VKNFADCNRQARQQMSS EK
Subjt:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

XP_022965185.1 uncharacterized protein LOC111465118 [Cucurbita maxima]

2.5e-82

84.7

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Query:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESE
        SLPRSIMGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSG+LKGSTSDGWPHQ+PPLFLP+IPP+HSAN E DAIRS+LQESE
Subjt:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESE

Query:  RVVEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        RVV+KLQK EDNM+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++SSVEK
Subjt:  RVVEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

XP_038876833.1 uncharacterized protein LOC120069208 [Benincasa hispida]

5.7e-82

86.74

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDTEKPKRKPRRNR+KVPQESK    KVD KH SDDSGMLKGSTSDGWP+Q PPLFLP+IPP+HSAN E DAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV

Query:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK EDNML+EVTQRAKDLHDKEFKLPYQKPMPCLAES+ACFQCYK++PN++LKCARLVKNF +CNRQARQQ+SSVEK
Subjt:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BKT1 uncharacterized protein LOC103490925

3.4e-80

84.53

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDT+KPKRKPRRNR+KVPQESK    KVD K+ SDDSG LKGSTSDGWPHQ PPLFLP+IPP+H ANAE DAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV

Query:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK EDNML+EVTQRAKDLHDKEFKLPYQKPMPC+AES+ACFQCYK++PND LKCARLVKNF +CNRQARQ++SS EK
Subjt:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

A0A5D3D7J8 Uncharacterized protein

3.4e-80

84.53

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDT+KPKRKPRRNR+KVPQESK    KVD K+ SDDSG LKGSTSDGWPHQ PPLFLP+IPP+H ANAE DAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV

Query:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK EDNML+EVTQRAKDLHDKEFKLPYQKPMPC+AES+ACFQCYK++PND LKCARLVKNF +CNRQARQ++SS EK
Subjt:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

A0A6J1DFM6 uncharacterized protein LOC111020378

1.8e-81

86.19

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV
        MGDFSIQISSNLV+ML+DDTEKPKRKPRRNRTKVPQESK    KVD KH S DSGMLKGSTSDGWPHQ PPLFLPVIPP+HSAN E DAIRSVL+ESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERV

Query:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VE+LQK E+NM+QEVTQRAKDLHD+EFKLPYQKPMPCLAES ACFQCYK++ NDLLKCAR VKNFADCNRQARQQMSS EK
Subjt:  VEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

A0A6J1E6U2 uncharacterized protein LOC111431139

1.4e-78

84.36

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERVVEKL
        MGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSGMLKGSTSDGWPHQ+PPLFLP+IPP+HSAN E DAIRS+LQESERVVEKL
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERVVEKL

Query:  QKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK
        QK EDNM+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++  SSVEK
Subjt:  QKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK

A0A6J1HN12 uncharacterized protein LOC111465118

1.2e-82

84.7

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Query:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESE
        SLPRSIMGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSG+LKGSTSDGWPHQ+PPLFLP+IPP+HSAN E DAIRS+LQESE
Subjt:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESE

Query:  RVVEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        RVV+KLQK EDNM+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++SSVEK
Subjt:  RVVEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G12340.1 copper ion binding

2.7e-34

46.89

Show/hide

Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERVVEKL
        MGDFSIQISS L++ L +  ++PKR+ ++ + KV  +SK+   K   D+    K +     P Q PP F P IPP  +A+ E ++I+SV++ESE+V+EKL
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERVVEKL

Query:  QKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        +  E N+++EVT+RAKDL +KEFK+P  KPMPC ++ EA  +CYKE     LKC+  VK+F DC R++RQQ++  EK
Subjt:  QKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

Sequences

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CDS sequence

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ATGTCTTCTCTTTGGAACGGCTTCTTTTGTTCCTTTGGGGTGTCCACAATTCAAAATGGAGATTGTGGTTCCATGATTGAGGAAGTGCTTCTCAACTCTCCCTTTGGCGA
TAAAGGAAAGTTTTTGTGGCAAGCATGCTTCTTTGCTACTTTGTGGAATATTTGGCTTGAAAGGAATGGTCGTATCTTTAGAGGGATTGAGAGATCGGGGGAGGATCCTT
GTAGTCTGCCTAGGAGCATAATGGGTGATTTTTCCATTCAGATTAGTTCAAACCTTGTTGATATGCTAATTGATGATACCGAAAAACCAAAAAGAAAACCACGAAGAAAT
AGAACCAAGGTACCTCAAGAGAGTAAAAAGGTTGATCATAAACATATATCTGATGATTCTGGAATGCTGAAGGGAAGCACAAGTGATGGATGGCCACACCAATCTCCCCC
GCTCTTCCTTCCCGTAATTCCTCCCATACATTCTGCCAACGCAGAGCAAGACGCAATCCGATCCGTCCTGCAAGAGAGTGAAAGGGTTGTGGAGAAGTTGCAGAAGCATG
AGGACAACATGCTGCAGGAAGTCACTCAAAGGGCAAAAGACCTCCATGACAAGGAGTTCAAGCTCCCTTACCAGAAGCCTATGCCATGCTTGGCCGAAAGTGAAGCTTGC
TTTCAATGCTACAAAGAATATCCCAATGACCTCTTGAAATGTGCTCGTCTTGTAAAAAATTTTGCCGATTGTAACCGCCAAGCTCGGCAGCAAATGAGCTCGGTCGAGAA
GTAG

mRNA sequence

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Protein sequence

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MSSLWNGFFCSFGVSTIQNGDCGSMIEEVLLNSPFGDKGKFLWQACFFATLWNIWLERNGRIFRGIERSGEDPCSLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRN
RTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAEQDAIRSVLQESERVVEKLQKHEDNMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEAC
FQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

Lag0017569 (gene) of Sponge gourd (AG-4) v1 genome