; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017583 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017583
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpeptidyl-tRNA hydrolase ICT1, mitochondrial
Genome locationchr5:5613863..5619060
RNA-Seq ExpressionLag0017583
SyntenyLag0017583
Gene Ontology termsGO:0006415 - translational termination (biological process)
GO:0003747 - translation release factor activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR000352 - Peptide chain release factor class I


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7828375.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Senna tora]5.1e-5589.47Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVK+AYWLSDRIRE+IMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKLTLLAQENNTGFSKS
        KIAKMAAIGEQKRLKSKK    AQ +   F +S
Subjt:  KIAKMAAIGEQKRLKSKKLTLLAQENNTGFSKS

XP_021616566.1 peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1 [Manihot esculenta]8.7e-5598.31Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDAL KLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKK
        KIAKMAAIGEQKRLKSKK
Subjt:  KIAKMAAIGEQKRLKSKK

XP_021691536.1 peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X2 [Hevea brasiliensis]5.1e-5591.27Show/hide
Query:  AEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPP
        AE +   ++HVTVNFARSGGPGGQNVNKVNTKVDMRF+VKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGN+EDAL KLQAIIDAA+YVPP
Subjt:  AEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPP

Query:  PPSEEQKKKIAKMAAIGEQKRLKSKK
        PPSEEQKKKIAKMAAIGEQKRLKSKK
Subjt:  PPSEEQKKKIAKMAAIGEQKRLKSKK

XP_022152820.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Momordica charantia]1.3e-5598.32Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
        KIAKMAAIGEQKRLKSKK+
Subjt:  KIAKMAAIGEQKRLKSKKL

XP_038876872.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Benincasa hispida]4.3e-5495.8Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLS+RIRERI+QMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE+KK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
        KIAKMAAIGEQKRLKSKK+
Subjt:  KIAKMAAIGEQKRLKSKKL

TrEMBL top hitse value%identityAlignment
A0A2C9WIQ0 RF_PROK_I domain-containing protein4.2e-5598.31Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDAL KLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKK
        KIAKMAAIGEQKRLKSKK
Subjt:  KIAKMAAIGEQKRLKSKK

A0A6J1DF18 peptidyl-tRNA hydrolase ICT1, mitochondrial6.5e-5698.32Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
        KIAKMAAIGEQKRLKSKK+
Subjt:  KIAKMAAIGEQKRLKSKKL

A0A6J1E5G6 peptidyl-tRNA hydrolase ICT1, mitochondrial2.7e-5495.8Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
        KIAKMAAIGEQKRLKSKK+
Subjt:  KIAKMAAIGEQKRLKSKKL

A0A6J1HN26 peptidyl-tRNA hydrolase ICT1, mitochondrial2.7e-5495.8Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        +HVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
        KIAKMAAIGEQKRLKSKK+
Subjt:  KIAKMAAIGEQKRLKSKKL

A0A7N2REG6 RF_PROK_I domain-containing protein3.6e-5487.97Show/hide
Query:  PFPSIAAEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDA
        P P I  E       HVTVNFARSGGPGGQNVNKVNTKVDMRFNV++AYWLSDRIRE+IMQMEKNRINKDGELVISSTKTRTQKGNIEDAL KLQAIIDA
Subjt:  PFPSIAAEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDA

Query:  ASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL
        ASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKK+
Subjt:  ASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKL

SwissProt top hitse value%identityAlignment
B5XAM2 Peptidyl-tRNA hydrolase ICT1, mitochondrial8.0e-1942.86Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        + +TV+++RS GPGGQ+VNKV+TK ++RF+V  A W+ + +R++I+   KNRINK GEL+++S ++R+Q+ N+ D ++K+  II  A+  P  PS E   
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
          A       ++RLK KKL
Subjt:  KIAKMAAIGEQKRLKSKKL

D2HD32 Peptidyl-tRNA hydrolase ICT1, mitochondrial2.0e-1737.82Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        + +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R+++  M KN+IN+ GEL+++S  +R Q  N+ D L+K++ +I  AS  P  PS+E   
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
                  ++RL+ K++
Subjt:  KIAKMAAIGEQKRLKSKKL

Q14197 Peptidyl-tRNA hydrolase ICT1, mitochondrial2.6e-1737.82Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        + +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R++I    KN+IN+ GEL+++S  +R Q  N+ D L+K++ +I  AS  P  P++E  K
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
                  ++RL+ K++
Subjt:  KIAKMAAIGEQKRLKSKKL

Q3T116 Peptidyl-tRNA hydrolase ICT1, mitochondrial1.7e-1638.21Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE---
        + +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R+++    KN+IN+ GEL+++S  +R Q  N+ D L+K++ +I  AS     PS+E   
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE---

Query:  -QKKKIAKMAAIGEQKRLKSKKL
         QK +I  M     ++RL+ K++
Subjt:  -QKKKIAKMAAIGEQKRLKSKKL

Q8R035 Peptidyl-tRNA hydrolase ICT1, mitochondrial4.7e-1940Show/hide
Query:  EHQVKCSNHV-----TVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAAS
        EH  + S+++     ++++ RS GPGGQNVNKVN+K ++RF++  A W+ + +R++I    KN+INK GELV++S  +R Q  N+ + L+K++ +I  AS
Subjt:  EHQVKCSNHV-----TVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAAS

Query:  YVPPPPSEE----QKKKIAKMAAIGEQKRLKSKKL
         VP  PS+E    Q+ +I KM     ++RL+ K+L
Subjt:  YVPPPPSEE----QKKKIAKMAAIGEQKRLKSKKL

Arabidopsis top hitse value%identityAlignment
AT1G62850.2 Class I peptide chain release factor1.3e-5185.71Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        ++VT+NFARSGGPGGQNVNK+NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELVISSTKTRTQKGNI+DALEKLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
        KI K+AA  + KRLKSKK+
Subjt:  KIAKMAAIGEQKRLKSKKL

AT1G62850.3 Class I peptide chain release factor1.3e-5185.71Show/hide
Query:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK
        ++VT+NFARSGGPGGQNVNK+NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELVISSTKTRTQKGNI+DALEKLQAIIDAASYVPPPPSEEQKK
Subjt:  NHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKK

Query:  KIAKMAAIGEQKRLKSKKL
        KI K+AA  + KRLKSKK+
Subjt:  KIAKMAAIGEQKRLKSKKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTTCCTTCCATTGCAGCAGAACATCAAGTCAAGTGTTCAAACCATGTCACTGTGAATTTTGCAAGAAGTGGTGGCCCTGGGGGTCAGAATGTCAACAAAGTGAA
CACGAAGGTTGACATGCGCTTCAATGTTAAAGATGCATATTGGCTAAGTGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATCGGATCAATAAGGATGGGGAGC
TTGTAATTTCATCCACTAAAACTAGAACGCAGAAGGGTAACATTGAAGATGCCTTGGAGAAACTTCAGGCAATAATTGATGCTGCTTCTTATGTTCCGCCGCCTCCCTCA
GAAGAGCAAAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAACAGAAACGCCTTAAAAGCAAGAAGCTTACTCTTTTAGCTCAGGAAAATAATACAGGATTTTCAAA
AAGTAATACCATGATTCTCTGGTGCAATGAAGAAATCATTCAGAGCAAAACCTGTTGGAAGCAGAGGACTTGGAGATTTGCTTCCTTCACAGACTACCGGCCACCATCGT
TGACATCCGACTATCGATCGTCGCCGACCAGCCACCACTGTCAACCTCCAACAATCAATTGTCGCCGACCGATCGCCTCCGTCGACCTTCGACTATCGGCTGCCGCCGAC
CTCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTTCCTTCCATTGCAGCAGAACATCAAGTCAAGTGTTCAAACCATGTCACTGTGAATTTTGCAAGAAGTGGTGGCCCTGGGGGTCAGAATGTCAACAAAGTGAA
CACGAAGGTTGACATGCGCTTCAATGTTAAAGATGCATATTGGCTAAGTGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATCGGATCAATAAGGATGGGGAGC
TTGTAATTTCATCCACTAAAACTAGAACGCAGAAGGGTAACATTGAAGATGCCTTGGAGAAACTTCAGGCAATAATTGATGCTGCTTCTTATGTTCCGCCGCCTCCCTCA
GAAGAGCAAAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAACAGAAACGCCTTAAAAGCAAGAAGCTTACTCTTTTAGCTCAGGAAAATAATACAGGATTTTCAAA
AAGTAATACCATGATTCTCTGGTGCAATGAAGAAATCATTCAGAGCAAAACCTGTTGGAAGCAGAGGACTTGGAGATTTGCTTCCTTCACAGACTACCGGCCACCATCGT
TGACATCCGACTATCGATCGTCGCCGACCAGCCACCACTGTCAACCTCCAACAATCAATTGTCGCCGACCGATCGCCTCCGTCGACCTTCGACTATCGGCTGCCGCCGAC
CTCCCCTGA
Protein sequenceShow/hide protein sequence
MPFPSIAAEHQVKCSNHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPS
EEQKKKIAKMAAIGEQKRLKSKKLTLLAQENNTGFSKSNTMILWCNEEIIQSKTCWKQRTWRFASFTDYRPPSLTSDYRSSPTSHHCQPPTINCRRPIASVDLRLSAAAD
LP