; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017603 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017603
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:5874739..5875323
RNA-Seq ExpressionLag0017603
SyntenyLag0017603
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]1.0e-3041.07Show/hide
Query:  REKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQ
        ++KR  HW +WE LCK K  GGL F+DL AFNQA+LAKQ WR+L  P   ++++   +Y P+   L A +  + SF W+   WG +LL  G+R  +G+G 
Subjt:  REKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQ

Query:  SIAIFSDPWLPRPSTFKVISPFDPNLKDMT-VAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISGSA
        SI +++D WLP PS FK++SP  P L   T V +    S  W+VP L        V+ I ++P++  A
Subjt:  SIAIFSDPWLPRPSTFKVISPFDPNLKDMT-VAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISGSA

VVA39578.1 PREDICTED: reverse mRNAase [Prunus dulcis]6.9e-3243.86Show/hide
Query:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT
        N    RK HW  WE LC+PK+ GG+ F+ L AFN AMLAKQ WR+LT P    SK+L  KY PTSS LNAS++   S  WK       +L  G R  +G 
Subjt:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT

Query:  GQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIH-WDVPKLNLFLIGVNVEMIKKVPISGSAP
        G +I I+ D W+P+P  FK+ SP  P+     VA+ I    H W+ P L   L    VE+I  +P+S   P
Subjt:  GQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIH-WDVPKLNLFLIGVNVEMIKKVPISGSAP

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]1.1e-4046.59Show/hide
Query:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT
        +  + +K HW  WE +C PKE+GGLNF+DL  FNQA++AKQ WRVL NPN+ +S+VL  KY   S VL A+   + S+FWKGF+WG DLL  G+R  +G 
Subjt:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT

Query:  GQSIAIFSDPWLPRPSTFK-VISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI
        G +I IFSDPW+PRP +F+ + +PF P   D+ VA+ I P+  WDV  ++      + ++I  +P+S  ++ D+WI
Subjt:  GQSIAIFSDPWLPRPSTFK-VISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.8e-4048.84Show/hide
Query:  EKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS
        E RK HW +W  +C PKE GGLNF+DL  FNQA++AK  WR L +PNL +SKVL  KY   +S+L AS  + SS+FWKGF+WG DLL  G+R  +G G +
Subjt:  EKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS

Query:  IAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI
        I  FSDPWLPRP+TFK +  F+    D TVA FI    +WDV  ++      + ++I  +PIS  +  D+W+
Subjt:  IAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]9.0e-3244.3Show/hide
Query:  HWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQSIAIFS
        HW+ W+ LCK K  GG+ F++ V FNQA+LAKQAWR+L +P+  I++VL  +Y  T   L A+  A  S  WK  VWG +LL  G+R  +G+G  +   S
Subjt:  HWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQSIAIFS

Query:  DPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPIS
         PW+P PS FK +    P+ +D+ VA+FI  S  WDVPKL  F    +V+ I  +P+S
Subjt:  DPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPIS

TrEMBL top hitse value%identityAlignment
A0A5E4GJ61 PREDICTED: reverse mRNAase3.4e-3243.86Show/hide
Query:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT
        N    RK HW  WE LC+PK+ GG+ F+ L AFN AMLAKQ WR+LT P    SK+L  KY PTSS LNAS++   S  WK       +L  G R  +G 
Subjt:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT

Query:  GQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIH-WDVPKLNLFLIGVNVEMIKKVPISGSAP
        G +I I+ D W+P+P  FK+ SP  P+     VA+ I    H W+ P L   L    VE+I  +P+S   P
Subjt:  GQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIH-WDVPKLNLFLIGVNVEMIKKVPISGSAP

A0A6J1BRN0 uncharacterized protein LOC1110047875.2e-4146.59Show/hide
Query:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT
        +  + +K HW  WE +C PKE+GGLNF+DL  FNQA++AKQ WRVL NPN+ +S+VL  KY   S VL A+   + S+FWKGF+WG DLL  G+R  +G 
Subjt:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT

Query:  GQSIAIFSDPWLPRPSTFK-VISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI
        G +I IFSDPW+PRP +F+ + +PF P   D+ VA+ I P+  WDV  ++      + ++I  +P+S  ++ D+WI
Subjt:  GQSIAIFSDPWLPRPSTFK-VISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI

A0A6J1DX30 uncharacterized protein LOC1110248748.8e-4148.84Show/hide
Query:  EKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS
        E RK HW +W  +C PKE GGLNF+DL  FNQA++AK  WR L +PNL +SKVL  KY   +S+L AS  + SS+FWKGF+WG DLL  G+R  +G G +
Subjt:  EKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS

Query:  IAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI
        I  FSDPWLPRP+TFK +  F+    D TVA FI    +WDV  ++      + ++I  +PIS  +  D+W+
Subjt:  IAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISG-SAPDTWI

A0A803NXV2 Uncharacterized protein1.5e-3542.69Show/hide
Query:  EKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS
        +KRK  W +WE++C+PK  GGL F+DLV FNQAM+AKQ WR++ +P+   ++VL  KY P +S+L+A     SS  W   +WGL LL  G+RK +G GQS
Subjt:  EKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS

Query:  IAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPI-SGSAPDTW
        +  F DPW+PRP +F+ ISP    +  + V+E I     WDV  L+ + + +++++I  +P+  G   D W
Subjt:  IAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPI-SGSAPDTW

A0A803Q6Z2 Uncharacterized protein4.4e-3244.3Show/hide
Query:  HWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQSIAIFS
        HW+ W+ LCK K  GG+ F++ V FNQA+LAKQAWR+L +P+  I++VL  +Y  T   L A+  A  S  WK  VWG +LL  G+R  +G+G  +   S
Subjt:  HWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQSIAIFS

Query:  DPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPIS
         PW+P PS FK +    P+ +D+ VA+FI  S  WDVPKL  F    +V+ I  +P+S
Subjt:  DPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPIS

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.2e-1839.45Show/hide
Query:  KRKRHWQRWENLCKPKE-IGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS
        KRK  W  W+ LCK KE  GGL F+DL  FNQA+LAKQ++R++  P+  +S++L  +Y P SS++  S+    S+ W+  + G +LL  G+ + +G G  
Subjt:  KRKRHWQRWENLCKPKE-IGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS

Query:  IAIFSDPWL
          ++ D W+
Subjt:  IAIFSDPWL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.2e-1938.39Show/hide
Query:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT
        N++E +  HW+ W++L   K  GG+ F+D+ AFN A+L KQ WR+L+ P   ++KV   +Y   S  LNA + +  SF WK      ++LR G R  +G 
Subjt:  NEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGT

Query:  GQSIAIFSDPWL
        G+ I I+   WL
Subjt:  GQSIAIFSDPWL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.5e-2039.45Show/hide
Query:  KRKRHWQRWENLCKPKE-IGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS
        KRK  W  W+ LCK KE  GGL F+DL  FNQA+LAKQ++R++  P+  +S++L  +Y P SS++  S+    S+ W+  + G +LL  G+ + +G G  
Subjt:  KRKRHWQRWENLCKPKE-IGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLLRCGIRKNLGTGQS

Query:  IAIFSDPWL
          ++ D W+
Subjt:  IAIFSDPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTGGTGCATGGTCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGAAAAGCGTAAGAGGCATTGGCAAAGGTGGGAGAATCTGTG
CAAGCCTAAAGAGATAGGTGGTCTTAATTTCCAAGATTTGGTGGCTTTTAACCAAGCAATGTTGGCAAAGCAGGCTTGGAGAGTTTTAACTAATCCAAACCTTACGATCT
CGAAAGTCTTATGTGGAAAATATTGTCCTACATCCTCAGTGTTAAATGCGTCTATTACAGCTTCTTCGTCCTTCTTTTGGAAGGGTTTTGTTTGGGGGTTGGATTTATTG
AGATGTGGCATAAGGAAAAATCTAGGGACGGGGCAATCTATTGCTATTTTTAGTGATCCGTGGCTTCCTCGTCCTTCTACCTTTAAGGTCATTTCTCCGTTTGATCCAAA
TCTGAAGGATATGACTGTAGCTGAATTTATAATGCCTTCCATCCATTGGGATGTCCCAAAACTAAATCTTTTTCTGATTGGGGTAAATGTGGAGATGATTAAAAAAGTTC
CGATAAGTGGATCGGCTCCAGATACATGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGTGGTGCATGGTCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGAAAAGCGTAAGAGGCATTGGCAAAGGTGGGAGAATCTGTG
CAAGCCTAAAGAGATAGGTGGTCTTAATTTCCAAGATTTGGTGGCTTTTAACCAAGCAATGTTGGCAAAGCAGGCTTGGAGAGTTTTAACTAATCCAAACCTTACGATCT
CGAAAGTCTTATGTGGAAAATATTGTCCTACATCCTCAGTGTTAAATGCGTCTATTACAGCTTCTTCGTCCTTCTTTTGGAAGGGTTTTGTTTGGGGGTTGGATTTATTG
AGATGTGGCATAAGGAAAAATCTAGGGACGGGGCAATCTATTGCTATTTTTAGTGATCCGTGGCTTCCTCGTCCTTCTACCTTTAAGGTCATTTCTCCGTTTGATCCAAA
TCTGAAGGATATGACTGTAGCTGAATTTATAATGCCTTCCATCCATTGGGATGTCCCAAAACTAAATCTTTTTCTGATTGGGGTAAATGTGGAGATGATTAAAAAAGTTC
CGATAAGTGGATCGGCTCCAGATACATGGATCTGA
Protein sequenceShow/hide protein sequence
MGGGAWSFLVGGAICLVNSVNEREKRKRHWQRWENLCKPKEIGGLNFQDLVAFNQAMLAKQAWRVLTNPNLTISKVLCGKYCPTSSVLNASITASSSFFWKGFVWGLDLL
RCGIRKNLGTGQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFIMPSIHWDVPKLNLFLIGVNVEMIKKVPISGSAPDTWI