; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017604 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017604
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H protein
Genome locationchr5:5875375..5877491
RNA-Seq ExpressionLag0017604
SyntenyLag0017604
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]3.4e-3331.1Show/hide
Query:  SRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMRS
        S WW+ +WK N+P+K K F WK+F+ ++PT   L    V V   C +C++D E+  H L+ C+ A E+W      ++   V Q  +   +  +I    RS
Subjt:  SRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMRS

Query:  LERV-----SVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGC
        ++ V      +G W +W +RNS+VH        +   WI N+   F  AN  N   + + +       +GE +I + DASFQ      G+GV+IRD  G 
Subjt:  LERV-----SVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGC

Query:  LVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAI
         +A +S   L C S    EA A LEG+ LA  + +  + I SD+ S+I +L+D       + A I    A+  +   +S+   +R  N ++H +A+ A+
Subjt:  LVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAI

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.8e-4133.13Show/hide
Query:  LKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQV-DQMD
        LK   TS S   R ++ W  +WK+ VP+K+K F+W+S H  IPT  NL    +     C +C +  E+  HA F C RAR+IW  ++P +  +   D + 
Subjt:  LKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQV-DQMD

Query:  IKDRWQGLIDE-PMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVE-RCDWITNYLEAFWSANPKNIS-HIQTKEDIVNLIVQGEERI---MHTDASFQGN
          + W  L ++   + L   ++  W IWNDRNSL+H +Q+  PVE +C+W+T +L++   A   N S   Q+    V    +    +   ++TDA+ +G 
Subjt:  IKDRWQGLIDE-PMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVE-RCDWITNYLEAFWSANPKNIS-HIQTKEDIVNLIVQGEERI---MHTDASFQGN

Query:  LSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTK
         +S   G +IRD    LVA  S+     +S L AE   +LEGL+ A   N   L + SDSL  I ++ + +         + +I+A+   F  +SF ++ 
Subjt:  LSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTK

Query:  RCFNGLSHKLARSAIVSP--TNLWVGNYPTWI
        R  N  +H LA+  I SP  T  W+ N+PTW+
Subjt:  RCFNGLSHKLARSAIVSP--TNLWVGNYPTWI

XP_030483669.1 uncharacterized protein LOC115700241 [Cannabis sativa]9.3e-3127.71Show/hide
Query:  SQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIW---TLIYPPMMRIQVDQMD
        S ET+ S       WW K WK+ +PSK++ FVWK FHN +P    L   H+  +  CPLC    ET +HALF C+RA+++W    L++   M       D
Subjt:  SQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIW---TLIYPPMMRIQVDQMD

Query:  IKDRWQGLIDEPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEER-----------------
                 +      E+  V  WSIW +RN+  HN+         D+ TNYL  + +A   +  +  +     +     +E                  
Subjt:  IKDRWQGLIDEPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEER-----------------

Query:  IMHTDASFQGNLSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKR
         +++DA+    L   GIG V+RD  G +VA  S    GC      EA+A+   L+ A  L +    I +DSL ++  L       +     + D+  +  
Subjt:  IMHTDASFQGNLSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKR

Query:  TFQRVSFEYTKRCFNGLSHKLARSAIVSPTNL-WVGNYPTWIETVSLKER
         F R    + KR  N  +  LA+ A+   T++ W+  +P  + TV +  R
Subjt:  TFQRVSFEYTKRCFNGLSHKLARSAIVSPTNL-WVGNYPTWIETVSLKER

XP_030498035.1 uncharacterized protein LOC115713693 [Cannabis sativa]1.6e-3028.44Show/hide
Query:  LKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQM--
        ++S  TS  D+      WK  W + +PSK+K F W+   NF+P    L    V  S  C LC +  E+  HALFQC  A+ +W     P+   +   M  
Subjt:  LKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQM--

Query:  -DIKDRWQGLIDEPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSAN--PKNISHIQTKEDIVNLIVQG--------EERIMHTD
         D       L+ +  + LE V V  W IW DRN + H +   D +   ++ TNY+E +  AN  P  ++   T   I  L  +G            ++ D
Subjt:  -DIKDRWQGLIDEPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSAN--PKNISHIQTKEDIVNLIVQG--------EERIMHTD

Query:  ASFQGNLSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRV
        A+        G+G ++R+  G ++A  S    GC  S   EA A+   L   ++L +    + +D+L + N LN      +C +  I+D+R +  +F R+
Subjt:  ASFQGNLSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRV

Query:  SFEYTKRCFNGLSHKLARSAI-VSPTNLWVGNYP
           + KR  N  +H LA+ A+ +     W+G  P
Subjt:  SFEYTKRCFNGLSHKLARSAI-VSPTNLWVGNYP

XP_030508858.1 uncharacterized protein LOC115723499 [Cannabis sativa]2.1e-3027.3Show/hide
Query:  WWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPM-MRIQVDQMDIKDRWQGLIDEPMRSL
        WW K WK+ +PSK++ FVWK FHN IP    L   H+  +  CPLC +  ET  HALF C+RA+E+W L    +  ++       +  +    +      
Subjt:  WWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPM-MRIQVDQMDIKDRWQGLIDEPMRSL

Query:  ERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERI--------------MHTDASFQGNLSSCGIGV
        E+     WSIW +RN+  H++    P     + T+YL  + SA  +++S+      I +   + +                 ++TDA+        G+G 
Subjt:  ERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERI--------------MHTDASFQGNLSSCGIGV

Query:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH
        V+RD  G + A  S +  GC  +   EA A++  L+    L +    I +DSL ++  L       +   A + D+  +  +F R    + KR  N  + 
Subjt:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH

Query:  KLARSAIVSPTN-LWVGNYPTWIETV
         LA+ A+   T+  W+  +P  + TV
Subjt:  KLARSAIVSPTN-LWVGNYPTWIETV

TrEMBL top hitse value%identityAlignment
A0A2N9GM07 Reverse transcriptase domain-containing protein3.4e-3129.61Show/hide
Query:  QETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTL-IYPPMMRIQVDQMDIKD
        +E+S  D  R    WK +W M +PSK++ F W++    +PTM  L+   + V+  CP C+E  E+  HA+++CS+ REIW L  +  ++ +QV   D+++
Subjt:  QETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTL-IYPPMMRIQVDQMDIKD

Query:  RWQGLIDEPM-RSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGV
            L+++ +   LE   + AW++W DRN  +HN Q     E         +      P+       +E+      +G  ++    A+F G     GIGV
Subjt:  RWQGLIDEPM-RSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGV

Query:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH
        VIRD +G  +A QS  ++G  S+   EA+A+ EG  LA +L ++ + + SD+ ++++ +N        +   I +I  + R+F     EY+ R  N ++H
Subjt:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH

Query:  KLARSA-IVSPTNLWVGNYPTWIETVSLKER
         LA+ A  +    LW  + P +I+    KER
Subjt:  KLARSA-IVSPTNLWVGNYPTWIETVSLKER

A0A5C7H0P0 Uncharacterized protein1.6e-3331.1Show/hide
Query:  SRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMRS
        S WW+ +WK N+P+K K F WK+F+ ++PT   L    V V   C +C++D E+  H L+ C+ A E+W      ++   V Q  +   +  +I    RS
Subjt:  SRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMRS

Query:  LERV-----SVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGC
        ++ V      +G W +W +RNS+VH        +   WI N+   F  AN  N   + + +       +GE +I + DASFQ      G+GV+IRD  G 
Subjt:  LERV-----SVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGC

Query:  LVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAI
         +A +S   L C S    EA A LEG+ LA  + +  + I SD+ S+I +L+D       + A I    A+  +   +S+   +R  N ++H +A+ A+
Subjt:  LVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAI

A0A6J1DX30 uncharacterized protein LOC1110248742.8e-4133.13Show/hide
Query:  LKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQV-DQMD
        LK   TS S   R ++ W  +WK+ VP+K+K F+W+S H  IPT  NL    +     C +C +  E+  HA F C RAR+IW  ++P +  +   D + 
Subjt:  LKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQV-DQMD

Query:  IKDRWQGLIDE-PMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVE-RCDWITNYLEAFWSANPKNIS-HIQTKEDIVNLIVQGEERI---MHTDASFQGN
          + W  L ++   + L   ++  W IWNDRNSL+H +Q+  PVE +C+W+T +L++   A   N S   Q+    V    +    +   ++TDA+ +G 
Subjt:  IKDRWQGLIDE-PMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVE-RCDWITNYLEAFWSANPKNIS-HIQTKEDIVNLIVQGEERI---MHTDASFQGN

Query:  LSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTK
         +S   G +IRD    LVA  S+     +S L AE   +LEGL+ A   N   L + SDSL  I ++ + +         + +I+A+   F  +SF ++ 
Subjt:  LSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTK

Query:  RCFNGLSHKLARSAIVSP--TNLWVGNYPTWI
        R  N  +H LA+  I SP  T  W+ N+PTW+
Subjt:  RCFNGLSHKLARSAIVSP--TNLWVGNYPTWI

A0A803PV88 Uncharacterized protein9.1e-3230.64Show/hide
Query:  WWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMR-SL
        WWK  W +N+P KVKNF W+ +H+ +P  +NL          C  C   +ET  HAL  CSRA +IW         +    +D+K+      D+  + SL
Subjt:  WWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMR-SL

Query:  ERVSVGAWSIWNDRNSLVHNQQIPDPVERCDW----ITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGCLV
          +    W+IWN RN  +       P +   W    I++Y EA  + N    + I  + DI ++ V      ++TDA+     S  GIG V++D  GC+V
Subjt:  ERVSVGAWSIWNDRNSLVHNQQIPDPVERCDW----ITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGCLV

Query:  AVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAI
        A  ++ + G + S  AEA+A+  GL     + I    + +DS  L++ +       + ++  + DIR     F  V   +T+R FNG +H LAR A+
Subjt:  AVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAI

A0A803QH54 Uncharacterized protein4.5e-3129.41Show/hide
Query:  SLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKD-RWQ
        S S+    +RWWK  W  ++P KVKNF W++F++ +PT  NL    V  S  C  C   +ET  HAL  CSRAR++W L       I     D+KD    
Subjt:  SLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKD-RWQ

Query:  GLIDEPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNI----SHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGV
           D        +    WSIW  RN  +      +  +   WI+ +L  +  A  K I    SH        N + +G  + ++TDA+ Q      G+G 
Subjt:  GLIDEPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNI----SHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGV

Query:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH
        V++D  G ++A  S+     I    AEA A+   L   + + +    IFSD   L+  ++   +  + +A  +WDIR     F   S  YT R  N  +H
Subjt:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH

Query:  KLARSAI-VSPTNLWVGNYPTWI
        ++A+ A+ +    +W  N P+++
Subjt:  KLARSAI-VSPTNLWVGNYPTWI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.7e-1222.44Show/hide
Query:  VWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLID----EPMRSLE
        +WK++V  K+K+F+W+     + T   LR+ ++    IC  C  + ET  H +F C   + +W      +          +D    LI     +   SL+
Subjt:  VWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLID----EPMRSLE

Query:  RVSVG--AWSIWNDRNSLVHNQQIPDP--------VERCDWI-----TNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGV
        R       W +W  RN  +  Q+   P         +  +W+     T       + NP   S   + +   N   +G  +        QG+  +   G 
Subjt:  RVSVG--AWSIWNDRNSLVHNQQIPDP--------VERCDWI-----TNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGV

Query:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH
         IR+  G +V   +        SL AEA+  L  L++     ++ +   SDS SL+ ++N+  +  + +   I+DIR         S E+  R  N  + 
Subjt:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH

Query:  KLA
         LA
Subjt:  KLA

AT3G09510.1 Ribonuclease H-like superfamily protein2.1e-1723.15Show/hide
Query:  KVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLI----DEPMRSL
        ++W + +  K+K+F+W++    + T   L T  +++   CP CH + E+ +HALF C  A   W L    ++R Q+   D ++    ++    D  M   
Subjt:  KVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLI----DEPMRSL

Query:  ERVSVG--AWSIWNDRNSLVHNQQIPDP--------VERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHT----DASFQGNLSSCGIGV
         ++      W IW  RN++V N+    P         E  DW+        + +P       T++   N I        +     DA F         G 
Subjt:  ERVSVG--AWSIWNDRNSLVHNQQIPDP--------VERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHT----DASFQGNLSSCGIGV

Query:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH
        +IR+  G  ++  S+      + L AE  A+L  L+         + +  D  +LIN++N  +   + +A  + DI      F  + F + +R  N L+H
Subjt:  VIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSH

Query:  KLAR-SAIVSPTNLWVGNYPTWIE
         LA+     S      G+ P W++
Subjt:  KLAR-SAIVSPTNLWVGNYPTWIE

AT3G25270.1 Ribonuclease H-like superfamily protein5.1e-1125.2Show/hide
Query:  KVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMRS----L
        K+WK+    K+K+F+WK     + T  NL+  H++    C  C ++ ET+ H  F C  A+++W     P   ++   + ++ + + L+   + +    L
Subjt:  KVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMRS----L

Query:  ERVSVG-AWSIWNDRNSLVHNQQ
          +++   W +W  RN LV  Q+
Subjt:  ERVSVG-AWSIWNDRNSLVHNQQ

AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.9e-0830Show/hide
Query:  VWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKD---RWQGLIDEPMRSLERVSVG---AWSIWN
        +W S  + +PT   L +  +Q+S +C LC + +ET DH +  C  +  IW ++    +R+Q  Q  + +    W  L      S+ R  V      +IW 
Subjt:  VWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKD---RWQGLIDEPMRSLERVSVG---AWSIWN

Query:  DRNSLVHNQQ
         RN+L+HN Q
Subjt:  DRNSLVHNQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAGAGCCAGGAGACATCTTTGTCAGACGTCGAGCGACAGAGCCGATGGTGGAAAAAGGTATGGAAGATGAACGTGCCATCCAAAGTAAAAAATTTTGTGTGGAA
ATCTTTTCATAACTTCATTCCAACAATGGTCAATCTAAGGACTCACCATGTTCAAGTAAGTGGGATTTGTCCACTTTGTCATGAAGATATGGAAACAACGGATCATGCCC
TGTTTCAGTGTTCTCGGGCTCGCGAGATATGGACTTTGATTTATCCGCCGATGATGCGAATTCAAGTGGATCAGATGGATATTAAAGATCGATGGCAAGGGTTGATTGAT
GAACCAATGCGGAGCTTAGAGCGGGTTTCTGTGGGAGCTTGGTCTATTTGGAATGATAGGAACAGCTTGGTTCATAATCAACAAATCCCTGACCCAGTGGAGCGATGTGA
TTGGATCACAAATTATCTAGAAGCTTTCTGGTCCGCGAATCCTAAAAACATTTCCCATATCCAGACAAAAGAAGATATAGTTAATCTCATAGTACAAGGTGAAGAGAGGA
TTATGCATACTGATGCTTCGTTTCAGGGGAATCTGAGTTCCTGTGGAATAGGTGTTGTCATACGTGATAAAATGGGATGTCTTGTGGCGGTGCAGTCCCTATCTTCCTTG
GGTTGCATTTCGTCATTGGGTGCGGAAGCTATTGCGGTTTTAGAAGGGTTACGTTTGGCTAATAAGTTAAATATTCAGTGCCTAACTATTTTTTCAGACTCTTTGTCGCT
GATCAATATGCTCAATGATGTGGTCCAGATGGAGGCTTGTGTTGCCGCAACGATTTGGGATATTAGAGCAATGAAAAGAACTTTCCAGAGAGTGAGTTTCGAGTATACGA
AGCGTTGTTTTAATGGTCTTTCTCATAAGCTTGCAAGATCAGCGATTGTGTCACCTACTAATTTATGGGTAGGAAACTATCCTACATGGATAGAGACTGTATCGCTCAAA
GAGCGAATGTTCTTTGTACCCCTATGGGGATCTGATGTTTTCGAATGTTTGGACTCTTTCAATCTCGGTCCAACATTAGTTCGAGCTTGTTTGGGTAGTTCAGTTCAGAC
TCATTCGATCACTTGTAGCTTGGACCCAAGTTCTTTTTGTTTGAGCTTGCTTTCAGATTGTTCAAATCCCATCGCCTATTGTTGGGAGCTCGTTAGGTTCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAGAGCCAGGAGACATCTTTGTCAGACGTCGAGCGACAGAGCCGATGGTGGAAAAAGGTATGGAAGATGAACGTGCCATCCAAAGTAAAAAATTTTGTGTGGAA
ATCTTTTCATAACTTCATTCCAACAATGGTCAATCTAAGGACTCACCATGTTCAAGTAAGTGGGATTTGTCCACTTTGTCATGAAGATATGGAAACAACGGATCATGCCC
TGTTTCAGTGTTCTCGGGCTCGCGAGATATGGACTTTGATTTATCCGCCGATGATGCGAATTCAAGTGGATCAGATGGATATTAAAGATCGATGGCAAGGGTTGATTGAT
GAACCAATGCGGAGCTTAGAGCGGGTTTCTGTGGGAGCTTGGTCTATTTGGAATGATAGGAACAGCTTGGTTCATAATCAACAAATCCCTGACCCAGTGGAGCGATGTGA
TTGGATCACAAATTATCTAGAAGCTTTCTGGTCCGCGAATCCTAAAAACATTTCCCATATCCAGACAAAAGAAGATATAGTTAATCTCATAGTACAAGGTGAAGAGAGGA
TTATGCATACTGATGCTTCGTTTCAGGGGAATCTGAGTTCCTGTGGAATAGGTGTTGTCATACGTGATAAAATGGGATGTCTTGTGGCGGTGCAGTCCCTATCTTCCTTG
GGTTGCATTTCGTCATTGGGTGCGGAAGCTATTGCGGTTTTAGAAGGGTTACGTTTGGCTAATAAGTTAAATATTCAGTGCCTAACTATTTTTTCAGACTCTTTGTCGCT
GATCAATATGCTCAATGATGTGGTCCAGATGGAGGCTTGTGTTGCCGCAACGATTTGGGATATTAGAGCAATGAAAAGAACTTTCCAGAGAGTGAGTTTCGAGTATACGA
AGCGTTGTTTTAATGGTCTTTCTCATAAGCTTGCAAGATCAGCGATTGTGTCACCTACTAATTTATGGGTAGGAAACTATCCTACATGGATAGAGACTGTATCGCTCAAA
GAGCGAATGTTCTTTGTACCCCTATGGGGATCTGATGTTTTCGAATGTTTGGACTCTTTCAATCTCGGTCCAACATTAGTTCGAGCTTGTTTGGGTAGTTCAGTTCAGAC
TCATTCGATCACTTGTAGCTTGGACCCAAGTTCTTTTTGTTTGAGCTTGCTTTCAGATTGTTCAAATCCCATCGCCTATTGTTGGGAGCTCGTTAGGTTCACTTAG
Protein sequenceShow/hide protein sequence
MLKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLID
EPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGCLVAVQSLSSL
GCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAIVSPTNLWVGNYPTWIETVSLK
ERMFFVPLWGSDVFECLDSFNLGPTLVRACLGSSVQTHSITCSLDPSSFCLSLLSDCSNPIAYCWELVRFT