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Lag0017630 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017630
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUPF0496 protein 4-like
Genome locationchr5:6133165..6133673
RNA-Seq ExpressionLag0017630
SyntenyLag0017630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593278.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2548.6Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL
        M+LL  SFNK CSK  N HH+RH  +ASF VS LQ F+ EVSSCLNQLLL S D   LSF WLLQL           AKLVVDL+ PV K  ADLVDGYL
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL

Query:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
        NY L                        Y +S               IV K +F GLEN+G V D+KKG SG+E AIE+
Subjt:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

KAG7025628.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2548.04Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL
        M+LL  SFNK CSK  N HH+RH  +ASF VS LQ F+ EVSSCLNQLLL S D + LSF WLLQL           AKLVVDL+ PV K  ADLVDGYL
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL

Query:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
        NY L                        Y +S               IV K +F G+EN+G V D+KKG SG+E AIE+
Subjt:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

XP_022960422.1 protein BPS1, chloroplastic-like [Cucurbita moschata]3.4e-2548.04Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL
        M+LL  SFNK CSK  N HH+RH  +ASF VS LQ F+ EVSSCLNQLLL S D   LSF WLLQL           AKLVVDL+ PV K  ADLVDGYL
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL

Query:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
        NY L                        Y +S               IV K +F GLEN+G V D+KKG S +E AIE+
Subjt:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

XP_023514538.1 protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-2548.6Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL
        M+LL  SFNK CSK  N HH+RH  +ASF VS LQ F+ EVSSCLNQLLL S D   LSF WLLQL           AKLVVDL+ PV K  ADLVDGYL
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL

Query:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
        NY L                        Y +S               IV K +F GLEN+G V D+KKG SG+E AIE+
Subjt:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

XP_038896303.1 protein BPS1, chloroplastic-like [Benincasa hispida]7.5e-3352.51Show/hide
Query:  MVLLFHSFNKLCSKLDNHHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL------------AKLVVDLEYPVGKCEADLVDGYL
        M LL  +FNKLCSKLDNHH+R  CK+SF VSRLQ FE +VSSCLNQLLL + DLK LSF+WLLQL            AKLVVDLEYPVGK  ADLVDGYL
Subjt:  MVLLFHSFNKLCSKLDNHHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL------------AKLVVDLEYPVGKCEADLVDGYL

Query:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
        NY L                        Y +S               IV K SF G E +G V+D+KKGCS +E AIEK
Subjt:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

TrEMBL top hitse value%identityAlignment
A0A1S4E356 UPF0496 protein 4-like1.8e-2446.41Show/hide
Query:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL------------AKLVVDLEYPVGKCEADLVDG
        M LL  +FNK CSKLDN H NRH  K ASF +SRL  FE +VS+CLN LLL +   K LSF +LLQL            AKLVVDLEYPVG+  ADLVDG
Subjt:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL------------AKLVVDLEYPVGKCEADLVDG

Query:  YLNYKLPF-----------------NGGCPYEISIVP---------------KTSFRGLENKGTVRDKKKGCSGKESAIEK
        YLNY L                        Y +S++                K    GLE +G V+D KKGCSG+E AIEK
Subjt:  YLNYKLPF-----------------NGGCPYEISIVP---------------KTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A5D3CEU0 UPF0496 protein 4-like1.8e-2446.41Show/hide
Query:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL------------AKLVVDLEYPVGKCEADLVDG
        M LL  +FNK CSKLDN H NRH  K ASF +SRL  FE +VS+CLN LLL +   K LSF +LLQL            AKLVVDLEYPVG+  ADLVDG
Subjt:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL------------AKLVVDLEYPVGKCEADLVDG

Query:  YLNYKLPF-----------------NGGCPYEISIVP---------------KTSFRGLENKGTVRDKKKGCSGKESAIEK
        YLNY L                        Y +S++                K    GLE +G V+D KKGCSG+E AIEK
Subjt:  YLNYKLPF-----------------NGGCPYEISIVP---------------KTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A6J1DLC1 UPF0496 protein 4-like4.0e-2443.72Show/hide
Query:  MVLLFHSFNKLCSKLDNHHN-----RHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLV
        MVLL  +FNKLCSKLDNHH+     RH  +AS   S LQ FE +VSSCL Q    S D +LLSF WLLQL            KL V+LE+PVG+   DLV
Subjt:  MVLLFHSFNKLCSKLDNHHN-----RHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLV

Query:  DGYLNYK---LPFNGGCPYEIS-----------------------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
        DGYLNY    L       + +S                             IVPK +FR  E K  VRD++KGCSG++ AIE+
Subjt:  DGYLNYK---LPFNGGCPYEIS-----------------------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A6J1H7D5 protein BPS1, chloroplastic-like1.6e-2548.04Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL
        M+LL  SFNK CSK  N HH+RH  +ASF VS LQ F+ EVSSCLNQLLL S D   LSF WLLQL           AKLVVDL+ PV K  ADLVDGYL
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL

Query:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
        NY L                        Y +S               IV K +F GLEN+G V D+KKG S +E AIE+
Subjt:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A6J1KTC2 protein BPS1, chloroplastic-like1.6e-2547.75Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL
        M+LL  +FNK CSK  N HH+RH  +ASF VS LQ F+ EVSSCLNQLLL S D   LSF WLLQL           +KLVVDL+ PV K  ADLVDGYL
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQL-----------AKLVVDLEYPVGKCEADLVDGYL

Query:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIE
        NY L                        Y +S               IV K +F GLEN+G V D+KK CSG+E AIE
Subjt:  NYKLPF-----------------NGGCPYEIS---------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTTTGTTTCATTCCTTCAACAAGCTCTGTTCCAAGCTCGACAATCACCACAACCGCCATGCATGTAAAGCTTCGTTCTTTGTTTCTCGTCTTCAGGTCTTCGA
GGTCGAAGTCTCGTCTTGCTTGAATCAACTCTTGCTGCCGAGTTTCGATTTGAAATTGTTGTCGTTTCAATGGCTTCTTCAACTTGCGAAATTGGTTGTTGATCTGGAGT
ACCCCGTCGGGAAATGCGAAGCCGATTTGGTTGATGGGTATTTGAATTACAAGCTCCCTTTTAATGGTGGTTGCCCATATGAAATTTCGATTGTCCCGAAGACAAGTTTC
AGAGGTTTGGAAAACAAAGGAACTGTGAGAGATAAAAAGAAGGGTTGCTCCGGCAAGGAGTCGGCGATCGAGAAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTTTGTTTCATTCCTTCAACAAGCTCTGTTCCAAGCTCGACAATCACCACAACCGCCATGCATGTAAAGCTTCGTTCTTTGTTTCTCGTCTTCAGGTCTTCGA
GGTCGAAGTCTCGTCTTGCTTGAATCAACTCTTGCTGCCGAGTTTCGATTTGAAATTGTTGTCGTTTCAATGGCTTCTTCAACTTGCGAAATTGGTTGTTGATCTGGAGT
ACCCCGTCGGGAAATGCGAAGCCGATTTGGTTGATGGGTATTTGAATTACAAGCTCCCTTTTAATGGTGGTTGCCCATATGAAATTTCGATTGTCCCGAAGACAAGTTTC
AGAGGTTTGGAAAACAAAGGAACTGTGAGAGATAAAAAGAAGGGTTGCTCCGGCAAGGAGTCGGCGATCGAGAAAAAGTAG
Protein sequenceShow/hide protein sequence
MVLLFHSFNKLCSKLDNHHNRHACKASFFVSRLQVFEVEVSSCLNQLLLPSFDLKLLSFQWLLQLAKLVVDLEYPVGKCEADLVDGYLNYKLPFNGGCPYEISIVPKTSF
RGLENKGTVRDKKKGCSGKESAIEKK