; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017632 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017632
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationchr5:6146956..6148313
RNA-Seq ExpressionLag0017632
SyntenyLag0017632
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596815.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia]2.1e-8295.78Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ+KAPPPPPR RFEPVDREKTCPLLLRVFTKVG HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_004147963.1 histone deacetylase complex subunit SAP18 [Cucumis sativus]2.5e-8396.39Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAP QGRPS RPLPPPSQ+KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_008448944.1 PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo]7.4e-8396.39Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP QGRPS RPLPPPSQ+KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_022152730.1 histone deacetylase complex subunit SAP18-like [Momordica charantia]7.1e-8698.8Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ KAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_022946300.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]1.6e-8295.78Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ+KAPPPPPR RFEPVDREKTCPLLLRVFTKVG HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

TrEMBL top hitse value%identityAlignment
A0A0A0L751 Uncharacterized protein1.2e-8396.39Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAP QGRPS RPLPPPSQ+KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A1S3BLT9 histone deacetylase complex subunit SAP18-like3.6e-8396.39Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP QGRPS RPLPPPSQ+KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A5D3D7E1 Histone deacetylase complex subunit SAP18-like3.6e-8396.39Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP QGRPS RPLPPPSQ+KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1DES5 histone deacetylase complex subunit SAP18-like3.5e-8698.8Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ KAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1KTJ0 histone deacetylase complex subunit SAP18-like8.0e-8395.78Show/hide
Query:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ+KAPPPPPR RFEPVDREKTCPLLLRVFTKVG HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP188.3e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

O55128 Histone deacetylase complex subunit SAP181.1e-2855.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

O64644 Histone deacetylase complex subunit SAP182.9e-5068.63Show/hide
Query:  AATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG    RPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI

Q3T022 Histone deacetylase complex subunit SAP188.3e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

Q5RDT5 Histone deacetylase complex subunit SAP188.3e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P182.1e-5168.63Show/hide
Query:  AATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG    RPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI

AT2G45640.2 SIN3 associated polypeptide P182.0e-4968.63Show/hide
Query:  AATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG    RPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G +    VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAGAAGCAGAGATGAGAAGATGAGCGGAGCTGCAACTGCTCCGCCGCAAGGGAGACCGTCGGCGCGGCCACTCCCTCCCCCGTCTCAGTCCAAAGCTCCCCC
GCCGCCGCCTCGCCCTCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTGTTTACTAAGGTTGGAGGTCACCACACCGATGAGGATTTTGCAA
TTAGAGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGA
AATGCCAAACTTTCTTTTGCTTTTGTTTATCCAGATAAGCGTGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGGCTAGATGACAG
CAAGGCATTGGGTGAACTGGACTTCCAGATTGGAGACTATTTGGACGTGGCAATCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGAGAAGCAGAGATGAGAAGATGAGCGGAGCTGCAACTGCTCCGCCGCAAGGGAGACCGTCGGCGCGGCCACTCCCTCCCCCGTCTCAGTCCAAAGCTCCCCC
GCCGCCGCCTCGCCCTCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTGTTTACTAAGGTTGGAGGTCACCACACCGATGAGGATTTTGCAA
TTAGAGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGA
AATGCCAAACTTTCTTTTGCTTTTGTTTATCCAGATAAGCGTGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGGCTAGATGACAG
CAAGGCATTGGGTGAACTGGACTTCCAGATTGGAGACTATTTGGACGTGGCAATCCTGTAG
Protein sequenceShow/hide protein sequence
MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQSKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRR
NAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL