; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017643 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017643
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr5:6353009..6353800
RNA-Seq ExpressionLag0017643
SyntenyLag0017643
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KNA21693.1 hypothetical protein SOVF_040780, partial [Spinacia oleracea]1.2e-0634.57Show/hide
Query:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        EE+  I  D    D  ++ L  CL+GKL +H   + E M+ T K  WR+ +G+ V  +  NL++F+F    D+++V+ +GP
Subjt:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

OMO61345.1 reverse transcriptase [Corchorus capsularis]1.0e-0540.74Show/hide
Query:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        EE++ +  D   +D T      CLIGKL S R    EVMR      W++  GLQV  +G+NLFIF+F  + ++ RV  Q P
Subjt:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.3e-0534.88Show/hide
Query:  LTLIEEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIE-RGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        LT  E+ +++D D  A++ T + L   LI KL S R  +  V++ T K  W+++ +   V+++G N+F+F F    DR R+L  GP
Subjt:  LTLIEEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIE-RGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.2e-0737.65Show/hide
Query:  LTLIEEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        LT  E+++++D D  A+    + L   L+GKL + R  +A+V+ +     W++E  L VE +GKNLF+F F  E D  RV+  GP
Subjt:  LTLIEEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.0e-0539.29Show/hide
Query:  EEDVSIDADRFAMDRTSELLG---CCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        EED  +   R   D TS ++G    CL+GKL + R    E M+ T  + W+  +G+QV ++G NLF+F F    D+ RVL+ GP
Subjt:  EEDVSIDADRFAMDRTSELLG---CCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

TrEMBL top hitse value%identityAlignment
A0A0K9RQE1 CCHC-type domain-containing protein (Fragment)5.8e-0734.57Show/hide
Query:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        EE+  I  D    D  ++ L  CL+GKL +H   + E M+ T K  WR+ +G+ V  +  NL++F+F    D+++V+ +GP
Subjt:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

A0A1R3GTB5 Reverse transcriptase4.9e-0640.74Show/hide
Query:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        EE++ +  D   +D T      CLIGKL S R    EVMR      W++  GLQV  +G+NLFIF+F  + ++ RV  Q P
Subjt:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

A0A1R3KUZ6 DUF4283 domain-containing protein7.1e-0538.27Show/hide
Query:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        EE+  +  D   +  T +    CLIGKL S R    EVMR      W++  GLQ++ +G  LFIF+F  E ++ RV  Q P
Subjt:  EEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

A0A6J1DU55 uncharacterized protein LOC1110231354.5e-0737.65Show/hide
Query:  LTLIEEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP
        LT  E+++++D D  A+    + L   L+GKL + R  +A+V+ +     W++E  L VE +GKNLF+F F  E D  RV+  GP
Subjt:  LTLIEEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQGP

A0A803ML34 Uncharacterized protein3.8e-0634.12Show/hide
Query:  LTLIEEDVSI-DADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQG
        +TLIEE+  I D D    +  +E L  CL+GKL +    + +VM+ T ++ W++ +G+ V  +  N+FIF+F    ++++VL +G
Subjt:  LTLIEEDVSI-DADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLFEEDRVRVLNQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATTAATACGATGGTTTCCACCATGATTTCCTCCTCCCAGTCGATCAGGTTCCCTGATCTGTTTTTCCTTGTCGATTCCTTGGCTATCTTGGGCAGTAATTC
AATCGGTATCAAGCGGCTTCAATATGTGACAGGCTGTGATGGAGCGATTTTAGCTACTGGGGATGTGTCTTCCGGTGAGTTTTGTACGACTTTAATGGCCAGATTTAATA
CGATAGTTTCCACCGTGATTTCCCCATCCCATTCGATCAGTATCCCTGATCTTCAGCTTCTTGCCTTTTCCTTAGCTGTCATGGGCAGAATATCGGTCAGGGTCCAACGG
TTTCGATATGTGGCAGGCTGTGAAGGAGTGATTGTTGCTGCTGTGAGGCTATATCAGTCTGAAGTTGGGTTGTCTATAGCATCACCATTCCTTGCTTTATTTGGCTATTG
TCTCACCCTCATAGAAGAAGATGTCTCGATTGATGCTGACCGTTTTGCTATGGATCGTACTAGTGAGTTGTTAGGGTGTTGCTTGATTGGAAAGTTGCAATCTCATCGTT
TTCGGGCGGCTGAAGTCATGAGGAAAACCTTCAAAGCGACGTGGAGAATTGAGAGGGGTCTTCAAGTTGAACTGTTGGGGAAGAATCTCTTCATTTTTCGTTTCCTTTTT
GAGGAGGATCGTGTTCGAGTCCTGAATCAAGGCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATTAATACGATGGTTTCCACCATGATTTCCTCCTCCCAGTCGATCAGGTTCCCTGATCTGTTTTTCCTTGTCGATTCCTTGGCTATCTTGGGCAGTAATTC
AATCGGTATCAAGCGGCTTCAATATGTGACAGGCTGTGATGGAGCGATTTTAGCTACTGGGGATGTGTCTTCCGGTGAGTTTTGTACGACTTTAATGGCCAGATTTAATA
CGATAGTTTCCACCGTGATTTCCCCATCCCATTCGATCAGTATCCCTGATCTTCAGCTTCTTGCCTTTTCCTTAGCTGTCATGGGCAGAATATCGGTCAGGGTCCAACGG
TTTCGATATGTGGCAGGCTGTGAAGGAGTGATTGTTGCTGCTGTGAGGCTATATCAGTCTGAAGTTGGGTTGTCTATAGCATCACCATTCCTTGCTTTATTTGGCTATTG
TCTCACCCTCATAGAAGAAGATGTCTCGATTGATGCTGACCGTTTTGCTATGGATCGTACTAGTGAGTTGTTAGGGTGTTGCTTGATTGGAAAGTTGCAATCTCATCGTT
TTCGGGCGGCTGAAGTCATGAGGAAAACCTTCAAAGCGACGTGGAGAATTGAGAGGGGTCTTCAAGTTGAACTGTTGGGGAAGAATCTCTTCATTTTTCGTTTCCTTTTT
GAGGAGGATCGTGTTCGAGTCCTGAATCAAGGCCCTTAG
Protein sequenceShow/hide protein sequence
MAGINTMVSTMISSSQSIRFPDLFFLVDSLAILGSNSIGIKRLQYVTGCDGAILATGDVSSGEFCTTLMARFNTIVSTVISPSHSISIPDLQLLAFSLAVMGRISVRVQR
FRYVAGCEGVIVAAVRLYQSEVGLSIASPFLALFGYCLTLIEEDVSIDADRFAMDRTSELLGCCLIGKLQSHRFRAAEVMRKTFKATWRIERGLQVELLGKNLFIFRFLF
EEDRVRVLNQGP