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Lag0017652 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017652
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:6402181..6402738
RNA-Seq ExpressionLag0017652
SyntenyLag0017652
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]3.3e-3139.11Show/hide
Query:  WGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEK
        W + +     +++     K++      S  D  D L + E Q++++LQ+EE++WKQRSR  WL+EGD NT++FH +AS  +K NRIGG+ D QG W ++ 
Subjt:  WGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEK

Query:  TAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
          V R+  ++F  LF++  P+ +  + A +D +  V++EMN  L  PF +EEI+ AL Q  P KAP PDGL  +F++ H
Subjt:  TAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]3.3e-3139.11Show/hide
Query:  WGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEK
        W + +     +++     K++      S  D  D L + E Q++++LQ+EE++WKQRSR  WL+EGD NT++FH +AS  +K NRIGG+ D QG W ++ 
Subjt:  WGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEK

Query:  TAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
          V R+  ++F  LF++  P+ +  + A +D +  V++EMN  L  PF +EEI+ AL Q  P KAP PDGL  +F++ H
Subjt:  TAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

XP_015382608.1 uncharacterized protein LOC107175577 [Citrus sinensis]3.1e-2937.84Show/hide
Query:  MRSMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQG
        M  +  W + + R   +++    +++Q         +SR  +   E Q+++++ +EE+YWKQRSR  WL+EGD NT++FH +AS  +K NRI G+E++ G
Subjt:  MRSMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQG

Query:  LWQQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
         W +    V     +YF  LFT+  PS    E  L+ + P V ++MN++L +PFT EE+  AL Q  P KAP PDGL  +FY+ H
Subjt:  LWQQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]4.7e-3045.27Show/hide
Query:  SRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRD
        S D +   E Q++D+L +EE+YW+QRSR +WL+EGD NT++FH +AS  ++ N I G+ D    W ++   + R+  +Y+ +LFTS  PS Q  E+ALR+
Subjt:  SRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRD

Query:  LNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
        +   V  EMN  L +PFT+ +IL AL Q HP KAP PDGL  +F++ H
Subjt:  LNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.7e-3541.76Show/hide
Query:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW
        S+  WGR+K+ NF  R+ +    +Q  I DL  + +R+   QA   +  +L+EEE++W+QRSR+LW + GD NT+WFH +AS+ ++ N I GL D QG W
Subjt:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW

Query:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKN
        ++ K  V+ ++  YF  LF+S+ PSV   E     +   V    N  LL+PF +EE+++AL Q HP+KA  PD  S +FYKN
Subjt:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKN

TrEMBL top hitse value%identityAlignment
A0A2N9F7A6 Uncharacterized protein1.1e-2936.61Show/hide
Query:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW
        S+  W + +  +    I ++ +++Q   T+LS S     LV+ + +L  +L++EE++W+QRSR  W+ EGD NT++FH   +  ++ N I GL D   +W
Subjt:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW

Query:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
        Q EK  +  +   YFQ++FTS+ P V      L  +   V  +MN  LL  FT+EE+  AL+Q +P KAP PDG+S  FY+ +
Subjt:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

A0A2N9GPZ7 Reverse transcriptase domain-containing protein4.9e-3338.25Show/hide
Query:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW
        S+ GW R +  +    I  + +++Q  I +  +  S  +L + +  L  +L++EE++W+QRSR  W+ EGD NT++FH + +  ++ N I GL D  G+W
Subjt:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW

Query:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
        Q EKT +  +  DYFQ +FTS+ PS +     L+ +   V + MN  L   FTK+E+ LALKQ +P KAP PDG+S  FY+ +
Subjt:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

A0A2N9IDC0 Uncharacterized protein3.0e-3034.43Show/hide
Query:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW
        S+  W R K  +F   I  + + +Q  + +    DS   +++ + +L  +L++EE++W+QRSR  W+ EGD NT++FH + ++ ++LN I GL DN G+W
Subjt:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW

Query:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
        Q +K+ ++++  DYF+ +FTS  P +   +  L  +   V  E+N  L+  FT +E++ AL+  +P KAP PDG+   FY+ +
Subjt:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

A0A2N9IPS8 Reverse transcriptase domain-containing protein4.9e-3338.25Show/hide
Query:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW
        S+ GW R +  +    I  + +++Q  I +  +  S  +L + +  L  +L++EE++W+QRSR  W+ EGD NT++FH + +  ++ N I GL D  G+W
Subjt:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW

Query:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH
        Q EKT +  +  DYFQ +FTS+ PS +     L+ +   V + MN  L   FTK+E+ LALKQ +P KAP PDG+S  FY+ +
Subjt:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH

A0A6J1DAR4 uncharacterized protein LOC1110189548.1e-3641.76Show/hide
Query:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW
        S+  WGR+K+ NF  R+ +    +Q  I DL  + +R+   QA   +  +L+EEE++W+QRSR+LW + GD NT+WFH +AS+ ++ N I GL D QG W
Subjt:  SMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLW

Query:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKN
        ++ K  V+ ++  YF  LF+S+ PSV   E     +   V    N  LL+PF +EE+++AL Q HP+KA  PD  S +FYKN
Subjt:  QQEKTAVIRVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.2e-0930.47Show/hide
Query:  EVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEKTAVIRVMTDYFQHLFTSAGPSV-QDFEVALRDLNPF-VDDEMNQALLRPF
        E +++Q+SR  WL++GD NTR+FH     +Q  N I  L  +  +  +  T V  ++  Y+ HL  S    +  D    ++D++PF  +D +   L    
Subjt:  EVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEKTAVIRVMTDYFQHLFTSAGPSV-QDFEVALRDLNPF-VDDEMNQALLRPF

Query:  TKEEILLALKQTHPNKAPSPDGLSGSFY
        + +EI  A+     NKAP PD  +  F+
Subjt:  TKEEILLALKQTHPNKAPSPDGLSGSFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTCGATGGCTGGTTGGGGTCGATCAAAGTCCAGGAATTTCCCGAGGCGCATCAGTATTGAGAATCAGAAGGTTCAGTTGACCATCACTGATCTTAGTACATCAGA
CTCTCGCGATTTGCTTGTCCAGGCTGAGGCTCAATTGGAAGATGTGTTGCAGGAGGAGGAGGTATATTGGAAACAGAGGTCCAGGGAGTTGTGGCTTCGAGAAGGGGACC
ACAATACTCGGTGGTTCCATTGTCGAGCCTCTTACCACCAGAAGCTCAATCGCATTGGAGGGTTGGAGGATAATCAGGGACTGTGGCAACAGGAGAAGACTGCAGTTATT
CGAGTGATGACTGATTACTTCCAGCATCTCTTTACATCAGCGGGCCCGAGTGTTCAGGACTTTGAGGTAGCTCTGCGAGACCTGAATCCTTTTGTGGATGATGAGATGAA
CCAGGCACTACTGCGACCATTTACCAAAGAGGAAATCCTATTGGCTTTGAAGCAGACGCATCCTAATAAAGCCCCTAGTCCAGATGGGCTGTCGGGAAGCTTTTACAAGA
ACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTTCGATGGCTGGTTGGGGTCGATCAAAGTCCAGGAATTTCCCGAGGCGCATCAGTATTGAGAATCAGAAGGTTCAGTTGACCATCACTGATCTTAGTACATCAGA
CTCTCGCGATTTGCTTGTCCAGGCTGAGGCTCAATTGGAAGATGTGTTGCAGGAGGAGGAGGTATATTGGAAACAGAGGTCCAGGGAGTTGTGGCTTCGAGAAGGGGACC
ACAATACTCGGTGGTTCCATTGTCGAGCCTCTTACCACCAGAAGCTCAATCGCATTGGAGGGTTGGAGGATAATCAGGGACTGTGGCAACAGGAGAAGACTGCAGTTATT
CGAGTGATGACTGATTACTTCCAGCATCTCTTTACATCAGCGGGCCCGAGTGTTCAGGACTTTGAGGTAGCTCTGCGAGACCTGAATCCTTTTGTGGATGATGAGATGAA
CCAGGCACTACTGCGACCATTTACCAAAGAGGAAATCCTATTGGCTTTGAAGCAGACGCATCCTAATAAAGCCCCTAGTCCAGATGGGCTGTCGGGAAGCTTTTACAAGA
ACCATTAG
Protein sequenceShow/hide protein sequence
MRSMAGWGRSKSRNFPRRISIENQKVQLTITDLSTSDSRDLLVQAEAQLEDVLQEEEVYWKQRSRELWLREGDHNTRWFHCRASYHQKLNRIGGLEDNQGLWQQEKTAVI
RVMTDYFQHLFTSAGPSVQDFEVALRDLNPFVDDEMNQALLRPFTKEEILLALKQTHPNKAPSPDGLSGSFYKNH