| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 2.6e-126 | 40.2 | Show/hide |
Query: AAAAGTTNFSRPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPL
A+AAG+ N + P + S+KLDR N+ LWK+L LP++R KL+G++ G E CP +F I+SS S +K +
Subjt: AAAAGTTNFSRPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPL
Query: FESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV----
F W DQ LLGW+ NSM+ E+ATQ++ E +++LW Q L G +R++ YL+ F RKG +KM DYL MK+ D L AG+PV+T L+
Subjt: FESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV----
Query: ------------------------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFN
QA+LL FE R+E NNL ++LTL A+ N+AN + + S N RGS G GRGRG
Subjt: ------------------------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFN
Query: NNKPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKE
+ K CQVCG H A+ C+ RF+K +S + + H AF+A+QN +V D +WY DSGASNHVT + TE+ GK
Subjt: NNKPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKE
Query: CVTIGNGSKLQIKYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSA
+ +GNG KL I GSS L K+L+L ++L VP+I KNL+SVSKLA DNN+ VEF ++ C VKDK T V+LKG+L+DGLY+ G K
Subjt: CVTIGNGSKLQIKYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSA
Query: NFEKSHSSVNNNADELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAP
SA V V +S WHRRLGHP A ++GK H LPF++S SHA +LVHTDVWGPAP
Subjt: NFEKSHSSVNNNADELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAP
Query: VDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVET
+ + F++Y+ FVDD+SRF WIYPLK+KS+ + AF F + +NQF + +Q D GEY P+ +L + GI R+SCPYTSQQNGRAERKHRH+ E
Subjt: VDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVET
Query: GLTLLAQASMPLRF
GLTLLAQA MPL +
Subjt: GLTLLAQASMPLRF
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 6.3e-125 | 41.22 | Show/hide |
Query: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
L S+KLDR N+ LW+++ LPI+R +L+G++ G + CP +F+ AA S K+ +P FE W DQ LLGWL N
Subjt: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
Query: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
SM+ +ATQ++ E + +LW Q L G +R++ YL+ F RKG +KM DYL MK+ AD L AG+P++T L+
Subjt: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
Query: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMA-NSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVGHTA
QA+LL FE R+E N+L ++LTL A+ N+A S GN+ + N G N + RGS G GRGRG + K CQVCG H A
Subjt: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMA-NSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVGHTA
Query: LMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVG
+ C+ RF+K + SRSNH ++ + N +AS ++ D +WY DSGASNHVT + N +E+ GK + +GNG KL+I G
Subjt: LMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVG
Query: SSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADEL
SS L K+L+L ++L VP I KNL+SVSKLA DNN+ VEF ++ C VKDK T +L+G+L+DGLY+ K +S +S ++ + NN L
Subjt: SSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADEL
Query: PVFVVSANVVVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAM
+ + S NV +S S + A ++GK H LPF+ S SHA +LVHTDVWGPAP+ S F++Y+ F+DD++RF WIYPLK+KSD AF F M
Subjt: PVFVVSANVVVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAM
Query: VKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
V+NQF + +Q D GEY P+ + + GI R+SCPYTSQQNGRAERKHRH+ E GLTLLAQA MPL +
Subjt: VKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
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| PNX78574.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | 6.1e-120 | 39.8 | Show/hide |
Query: NQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGW
N L ++I S+ LDR NF LWK+L LPI+R +L+G++ G + CP QF+ +A E SG K+++P F W DQ +LGW
Subjt: NQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGW
Query: LYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV------------------
L N+M+ A+Q++ E +++LW Q L +R+ YLR F RKG KM DYL MK AD L AGSP+T L+
Subjt: LYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV------------------
Query: ----------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVG
QA+LL FE RL+ Q N ++L A+ N+AN + R N + RGS RG S R G G G +N+ +CQVC K G
Subjt: ----------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVG
Query: HTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIK
HTA+ C R++K ++G + + + H AF+A++ +Q D WY DSGASNHVT + TE GK + +GNG+KL+I
Subjt: HTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIK
Query: YVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNA
GSS L KNL+L ++L VP I KNL+SVSKL DNN+ VEF + C VKDK T V+L+G+L+DGLY+ S+ S N
Subjt: YVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNA
Query: DELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILF
D P +S K WHR+LGHP A + GKSH LPF++S SHA +L+HTDVWGPAP++S+ F++Y+ F
Subjt: DELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILF
Query: VDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLR
+DD SRF WIYPLK+KSD + AF F MV+NQF + +Q D GE+ P+ ++ + GI R+SCPYTSQQNGRAERKHRHV E GLTLLAQA+M L
Subjt: VDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLR
Query: F
+
Subjt: F
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 1.6e-120 | 39.48 | Show/hide |
Query: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
L S+KLDR NF LWK+L LP++R K +G++ G + CP QFV + + T ++++P ++ W DQ LLGWL N
Subjt: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
Query: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
SM+ ++ATQV+ E +++LW Q L G +R+ YL+ F K +KM YL MK+ AD L AGSP+++ L+
Subjt: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
Query: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNN-NKPVCQVCGKVGHT
QA+LL FE RL+ NN +++ L AS N A+ E G N FG RG RG ++RG G G + +P+CQ+CGK GHT
Subjt: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNN-NKPVCQVCGKVGHT
Query: ALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYV
A CY RF+K ++ + + +H +AF VASP D WY DSGASNHVT L + E +GK + +GNG KL+I
Subjt: ALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYV
Query: GSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADE
GS+ L D ++L N+L VP I KNL+SVSKL DNN VEF +++C VKDK T +LKG L+DGLY+ SAN E N D
Subjt: GSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADE
Query: LPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVD
P +S K IWHR+LGHP A +FGK H LPF+ S SHA DL+HTDVWGPAP+ S +F++Y+ F+D
Subjt: LPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVD
Query: DWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
D+SRF WI+PLK+KS+ + AF F +V+NQF + ++ D GEY P+ + GI ++SCPYTSQQNGRAERKHRHV E GLTLLAQA MPL +
Subjt: DWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
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| PNY01489.1 copia-like polyprotein, partial [Trifolium pratense] | 2.3e-119 | 39.68 | Show/hide |
Query: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
L I S+KLDR N+ LWK+L LP++R K +G++ G + CP QFV +A S K+V+P F+ W+ DQ LLGWL N
Subjt: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
Query: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
SM+ ++ATQ++ E +++LW Q L G +++ YL+ F RKG +KM +YL MK+ +D L +GSP++ L+
Subjt: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
Query: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGF-GRGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVGHTA
QA+LL FE RL+ NN S LTL AS N AN E R N F RG+ R + RG G G G +N K CQVC GHTA
Subjt: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGF-GRGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVGHTA
Query: LMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVG
+ C RF++ ++G +N G+ S AF VASP D WY DSGASNHVT + E++GK + +GNG KL+I G
Subjt: LMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVG
Query: SSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADEL
S+ L L+L ++L VP I KNL+SVSKL DNN+FVEF + C VKDK T +LKG L+DGLY+ D+S +N +
Subjt: SSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADEL
Query: PVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDD
P +S K WHR+LGHP A +FGK H LPF++S SH L+H+DVWGPAP+ S F++Y+ F+DD
Subjt: PVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDD
Query: WSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
+SRF WI+PLK+KSD + AF F + +NQF + +Q D GEY + ++ + GI R+SCPYTSQQNGRAERKHRHVVE GLTLLAQA MPLR+
Subjt: WSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 3.1e-125 | 41.22 | Show/hide |
Query: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
L S+KLDR N+ LW+++ LPI+R +L+G++ G + CP +F+ AA S K+ +P FE W DQ LLGWL N
Subjt: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
Query: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
SM+ +ATQ++ E + +LW Q L G +R++ YL+ F RKG +KM DYL MK+ AD L AG+P++T L+
Subjt: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
Query: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMA-NSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVGHTA
QA+LL FE R+E N+L ++LTL A+ N+A S GN+ + N G N + RGS G GRGRG + K CQVCG H A
Subjt: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMA-NSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVGHTA
Query: LMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVG
+ C+ RF+K + SRSNH ++ + N +AS ++ D +WY DSGASNHVT + N +E+ GK + +GNG KL+I G
Subjt: LMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVG
Query: SSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADEL
SS L K+L+L ++L VP I KNL+SVSKLA DNN+ VEF ++ C VKDK T +L+G+L+DGLY+ K +S +S ++ + NN L
Subjt: SSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADEL
Query: PVFVVSANVVVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAM
+ + S NV +S S + A ++GK H LPF+ S SHA +LVHTDVWGPAP+ S F++Y+ F+DD++RF WIYPLK+KSD AF F M
Subjt: PVFVVSANVVVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAM
Query: VKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
V+NQF + +Q D GEY P+ + + GI R+SCPYTSQQNGRAERKHRH+ E GLTLLAQA MPL +
Subjt: VKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
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| A0A2K3LJ49 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-120 | 39.8 | Show/hide |
Query: NQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGW
N L ++I S+ LDR NF LWK+L LPI+R +L+G++ G + CP QF+ +A E SG K+++P F W DQ +LGW
Subjt: NQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGW
Query: LYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV------------------
L N+M+ A+Q++ E +++LW Q L +R+ YLR F RKG KM DYL MK AD L AGSP+T L+
Subjt: LYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV------------------
Query: ----------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVG
QA+LL FE RL+ Q N ++L A+ N+AN + R N + RGS RG S R G G G +N+ +CQVC K G
Subjt: ----------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNNNKPVCQVCGKVG
Query: HTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIK
HTA+ C R++K ++G + + + H AF+A++ +Q D WY DSGASNHVT + TE GK + +GNG+KL+I
Subjt: HTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIK
Query: YVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNA
GSS L KNL+L ++L VP I KNL+SVSKL DNN+ VEF + C VKDK T V+L+G+L+DGLY+ S+ S N
Subjt: YVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNA
Query: DELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILF
D P +S K WHR+LGHP A + GKSH LPF++S SHA +L+HTDVWGPAP++S+ F++Y+ F
Subjt: DELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILF
Query: VDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLR
+DD SRF WIYPLK+KSD + AF F MV+NQF + +Q D GE+ P+ ++ + GI R+SCPYTSQQNGRAERKHRHV E GLTLLAQA+M L
Subjt: VDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLR
Query: F
+
Subjt: F
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| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 7.8e-121 | 39.48 | Show/hide |
Query: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
L S+KLDR NF LWK+L LP++R K +G++ G + CP QFV + + T ++++P ++ W DQ LLGWL N
Subjt: LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLGWLYN
Query: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
SM+ ++ATQV+ E +++LW Q L G +R+ YL+ F K +KM YL MK+ AD L AGSP+++ L+
Subjt: SMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV---------------------
Query: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNN-NKPVCQVCGKVGHT
QA+LL FE RL+ NN +++ L AS N A+ E G N FG RG RG ++RG G G + +P+CQ+CGK GHT
Subjt: -------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFG-RGSQRGGSNRGRGRGCGYGFFNN-NKPVCQVCGKVGHT
Query: ALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYV
A CY RF+K ++ + + +H +AF VASP D WY DSGASNHVT L + E +GK + +GNG KL+I
Subjt: ALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYV
Query: GSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADE
GS+ L D ++L N+L VP I KNL+SVSKL DNN VEF +++C VKDK T +LKG L+DGLY+ SAN E N D
Subjt: GSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADE
Query: LPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVD
P +S K IWHR+LGHP A +FGK H LPF+ S SHA DL+HTDVWGPAP+ S +F++Y+ F+D
Subjt: LPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVD
Query: DWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
D+SRF WI+PLK+KS+ + AF F +V+NQF + ++ D GEY P+ + GI ++SCPYTSQQNGRAERKHRHV E GLTLLAQA MPL +
Subjt: DWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 1.2e-126 | 40.2 | Show/hide |
Query: AAAAGTTNFSRPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPL
A+AAG+ N + P + S+KLDR N+ LWK+L LP++R KL+G++ G E CP +F I+SS S +K +
Subjt: AAAAGTTNFSRPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPL
Query: FESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV----
F W DQ LLGW+ NSM+ E+ATQ++ E +++LW Q L G +R++ YL+ F RKG +KM DYL MK+ D L AG+PV+T L+
Subjt: FESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLV----
Query: ------------------------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFN
QA+LL FE R+E NNL ++LTL A+ N+AN + + S N RGS G GRGRG
Subjt: ------------------------SQAELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFN
Query: NNKPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKE
+ K CQVCG H A+ C+ RF+K +S + + H AF+A+QN +V D +WY DSGASNHVT + TE+ GK
Subjt: NNKPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKE
Query: CVTIGNGSKLQIKYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSA
+ +GNG KL I GSS L K+L+L ++L VP+I KNL+SVSKLA DNN+ VEF ++ C VKDK T V+LKG+L+DGLY+ G K
Subjt: CVTIGNGSKLQIKYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSA
Query: NFEKSHSSVNNNADELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAP
SA V V +S WHRRLGHP A ++GK H LPF++S SHA +LVHTDVWGPAP
Subjt: NFEKSHSSVNNNADELPVFVVSANVVVSKSIWHRRLGHP--------------------------AVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAP
Query: VDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVET
+ + F++Y+ FVDD+SRF WIYPLK+KS+ + AF F + +NQF + +Q D GEY P+ +L + GI R+SCPYTSQQNGRAERKHRH+ E
Subjt: VDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVET
Query: GLTLLAQASMPLRF
GLTLLAQA MPL +
Subjt: GLTLLAQASMPLRF
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| A0A803PEH4 Uncharacterized protein | 4.7e-126 | 39.53 | Show/hide |
Query: NSIETSAAAAGTTNFSRPPLNQL----LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSG
NS A+++ TN + N LNQ S+KLDR N+ LWK + I+R ++L G+LSG CPP+FV
Subjt: NSIETSAAAAGTTNFSRPPLNQL----LNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSG
Query: TAPAKEVSPLFESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPV
+ +P +E+WI+ DQLL+GWLY+SM+ +AT+VMG +A L ++ L+G S+++ D R + Q RKGS M +YLR K+ ++ L AG P
Subjt: TAPAKEVSPLFESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPV
Query: TTRSLVS------QAELLVFEKRLELQNN------------LKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQ---------------RGG
LV+ AE L ++E ++N S + ++ + ++K + N A+ NG GRG Q RG
Subjt: TTRSLVS------QAELLVFEKRLELQNN------------LKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQ---------------RGG
Query: SNRGRGRGCGYGFFNNNKPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTA
SNR RGRG G G + ++P CQV GK GHTA +CY RF++ + G D + H +Q A N N + VA+PE + W+ADSGASNH+T+
Subjt: SNRGRGRGCGYGFFNNNKPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTA
Query: DYNNLANPTEYDGKECVTIGNGSKLQIKYVGSSCLTDGTKN-LSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLY
D NL +Y+GKE V +GNGSKL+I ++G+ L + N L L++ML VP IAKNLVSVSKLA DNNV +EF+ +FCLVKDK T V+L GVL+D LY
Subjt: DYNNLANPTEYDGKECVTIGNGSKLQIKYVGSSCLTDGTKN-LSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLY
Query: RFEGVKATSVDISQSANFEKSHS-SVNNNADELPVFVVSANVVVSKSIWHRRLGHPAVK--------------------------FGKSHALPFQNSVSH
+ + S Q +NF + + SV++N ++ + ++ + HRRLGHP++K +GK+HALPF++S +
Subjt: RFEGVKATSVDISQSANFEKSHS-SVNNNADELPVFVVSANVVVSKSIWHRRLGHPAVK--------------------------FGKSHALPFQNSVSH
Query: AFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYT
A S DL+HTD+WGPAP+ S + +YI FVDD+SR+ W+YPLK KSDAL AF F A+V+NQF + +L+SD+ GEY P L GI + CP+T
Subjt: AFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYT
Query: SQQNGRAERKHRHVVETGLTLLAQAS
S QNGRA+RKHRH VE GLTLLAQA+
Subjt: SQQNGRAERKHRHVVETGLTLLAQAS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.8e-21 | 24.05 | Show/hide |
Query: KPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECV
K C CG+ GH C+ + + N+N + + +S AFM + N V + + DSGAS+H+ D + + E +
Subjt: KPVCQVCGKVGHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECV
Query: TIGNGSKLQIKYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANF
+ + ++LE++L A NL+SV +L Q+ + +EF + V G+L + +A S++ NF
Subjt: TIGNGSKLQIKYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANF
Query: EKSHSSVNNNADELPVFVVSANVVVSKSIWHR-----RLGHPAVKFGKSHALPFQ--NSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFI
H + +D + + N+ +S+ + + P + GK LPF+ +H +VH+DV GP ++ D ++++FVD ++ +
Subjt: EKSHSSVNNNADELPVFVVSANVVVSKSIWHR-----RLGHPAVKFGKSHALPFQ--NSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFI
Query: WIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYA--PIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
Y +K KSD + F FVA + F V L DN EY + + C + GI+ L+ P+T Q NG +ER R + E T+++ A + F
Subjt: WIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYA--PIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPLRF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-32 | 24.58 | Show/hide |
Query: ESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYL-RQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLVSQAE
E W +D+ + +S +V ++ + A+ +WT ++ L+ ++ + YL +Q++ +L V L G +
Subjt: ESWIVVDQLLLGWLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYL-RQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLVSQAE
Query: LLVFEKRLELQNNLKSSLTLGASV----NMANSKEVGNQRSPNPASNGR---QNGFGRGSQRGGSNRGRGRGCGYGFFNNNKPV--CQVCGKVGHTALMC
+L+ +NL +++ G + ++ ++ + + P + G+ G GR QR +N GR G + V C C + GH C
Subjt: LLVFEKRLELQNNLKSSLTLGASV----NMANSKEVGNQRSPNPASNGR---QNGFGRGSQRGGSNRGRGRGCGYGFFNNNKPV--CQVCGKVGHTALMC
Query: --YQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVGS
++ E SG +N ++ + N+ F+ + ++ PE+ W D+ AS+H T + D V +GN S +I +G
Subjt: --YQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVGS
Query: SCL-TDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKST--SNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNAD
C+ T+ L L+++ VP + NL+S L +D + +F K + T S V+ KGV R LYR N E +N D
Subjt: SCL-TDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKST--SNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNAD
Query: ELPVFVVSANVVVSKSIWHRRLGHPAVK--------------------------FGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFV
E +S +WH+R+GH + K FGK H + FQ S + DLV++DV GP ++S+ ++++ F+
Subjt: ELPVFVVSANVVVSKSIWHRRLGHPAVK--------------------------FGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFV
Query: DDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYA--PIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPL
DD SR +W+Y LK K F F A+V+ + + L+SDN GEY CS GI + P T Q NG AER +R +VE ++L A +P
Subjt: DDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTALQSDNRGEYA--PIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMPL
Query: RF
F
Subjt: RF
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 8.0e-14 | 29.88 | Show/hide |
Query: VVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPL--KRKSDALTAFTHFVAMVKNQFKT
++ KS HR + K L +QNS + F +HTD++GP ++I F D+ ++F W+YPL +R+ L FT +A +KNQF+
Subjt: VVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPL--KRKSDALTAFTHFVAMVKNQFKT
Query: TVTALQSDNRGEYA--PIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMP
+V +Q D EY +H+ + GI + S+ +G AER +R +++ T L + +P
Subjt: TVTALQSDNRGEYA--PIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.9e-66 | 28.21 | Show/hide |
Query: LNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLG
LN ++ +T KL N+L+W + Y+L G L G+ PP + GT A V+P + W D+L+
Subjt: LNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLG
Query: WLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLVSQA--------------
+ ++S V V A ++W ++ ++ S LR +Q KG+ + DY++ + + D L G P+ V +
Subjt: WLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMPDYLRVMKSHADNLGQAGSPVTTRSLVSQA--------------
Query: --------ELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGR-GRGCGYGFFNNN---KPV---CQVCGKV
L +RL L + K A+V + V ++ + +N N R R +N + + F NN KP CQ+CG
Subjt: --------ELLVFEKRLELQNNLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGR-GRGCGYGFFNNN---KPV---CQVCGKV
Query: GHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQI
GH+A C Q + F + NS QP + +A NW DSGA++H+T+D+NNL+ Y G + V + +GS + I
Subjt: GHTALMCYQRFNKEFSGPIVNQNMGDSRSNHGNSSQPTAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQI
Query: KYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSS----
+ GS+ L+ ++ L+L N+L VP+I KNL+SV +L N V VEF VKD +T +L+G +D LY + + V + S + + +HSS
Subjt: KYVGSSCLTDGTKNLSLENMLCVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSS----
Query: VNNNADELPVFVVSANVVVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALT
+ + A + V+S + + H+ L KS+ +PF S ++ + +++DVW +P+ S ++R+Y++FVD ++R+ W+YPLK+KS
Subjt: VNNNADELPVFVVSANVVVSKSIWHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALT
Query: AFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMP
F F +++N+F+T + SDN GE+ + SQ GI+ S P+T + NG +ERKHRH+VETGLTLL+ AS+P
Subjt: AFTHFVAMVKNQFKTTVTALQSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-65 | 28.92 | Show/hide |
Query: LNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLG
LN ++ +T KL N+L+W + Y+L G L G+ P PP + GT V+P + W D+L+
Subjt: LNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGHLSGAEPCPPQFVQAAAISSSQSAGGGGASSSEAAASEVSGTAPAKEVSPLFESWIVVDQLLLG
Query: WLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMP-DYLRVMKSHADNLGQAGSPVTTRSLVSQAELLVFEKRLELQN
+ ++S V V A ++W ++ ++ S LR + + + L P D+ ++ +NL PV + + E L N
Subjt: WLYNSMSPEVATQVMGFENAQELWTAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMP-DYLRVMKSHADNLGQAGSPVTTRSLVSQAELLVFEKRLELQN
Query: NLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFNNN---KPV---CQVCGKVGHTALMCYQRFNKEFSGPIVNQ
L L ++ + + V R+ N N G R + + G ++N KP CQ+C GH+A C Q
Subjt: NLKSSLTLGASVNMANSKEVGNQRSPNPASNGRQNGFGRGSQRGGSNRGRGRGCGYGFFNNN---KPV---CQVCGKVGHTALMCYQRFNKEFSGPIVNQ
Query: NMGDSRSNHGNSSQP-TAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVGSSCLTDGTKNLSLENML
+ S +N S+ P T + N+ V SP NW DSGA++H+T+D+NNL+ Y G + V I +GS + I + GS+ L +++L L +L
Subjt: NMGDSRSNHGNSSQP-TAFMANQNMNQCVASPETVIDPNWYADSGASNHVTADYNNLANPTEYDGKECVTIGNGSKLQIKYVGSSCLTDGTKNLSLENML
Query: CVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADELPVFVVSANVVVSKSI--
VP+I KNL+SV +L N V VEF VKD +T +L+G +D LY + + +V + S + +HSS ++ P + +V+ + S+
Subjt: CVPSIAKNLVSVSKLAQDNNVFVEFHDHFCLVKDKSTSNVVLKGVLRDGLYRFEGVKATSVDISQSANFEKSHSSVNNNADELPVFVVSANVVVSKSI--
Query: ---WHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTAL
H+ L KSH +PF NS + + +++DVW +P+ S+ ++R+Y++FVD ++R+ W+YPLK+KS F F ++V+N+F+T + L
Subjt: ---WHRRLGHPAVKFGKSHALPFQNSVSHAFSKFDLVHTDVWGPAPVDSVHDFRFYILFVDDWSRFIWIYPLKRKSDALTAFTHFVAMVKNQFKTTVTAL
Query: QSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMP
SDN GE+ + SQ GI+ S P+T + NG +ERKHRH+VE GLTLL+ AS+P
Subjt: QSDNRGEYAPIHRLCSQLGINTRLSCPYTSQQNGRAERKHRHVVETGLTLLAQASMP
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