; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017662 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017662
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:6470530..6471971
RNA-Seq ExpressionLag0017662
SyntenyLag0017662
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEJ07916.1 putative ZmL1 non-LTR retrotransposon protein [Zea mays]1.1e-3129.34Show/hide
Query:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKG
        +L G  L  +G   R+G GN ++I  +P I R  ++R++        H+V +LI    GSW+  L+ + FL +DA  IL+IP+ E    D + W   PKG
Subjt:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKG

Query:  IFSVKSAYHLAVNLEE---AKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW
         FSVKSAY LA    +     DAS+S+       WK +WN+ +  + K+ +W++  N  P ++N+ ++ + I  LC +C    E   HL  +CK  K VW
Subjt:  IFSVKSAYHLAVNLEE---AKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW

Query:  SVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD----------------FKPDHIQFLKDLEEPSESIFVDPPPTA
                  L   KA     +   E    L +E     ++ +W  W+ RNK  + +                   + +Q  K    P  ++   PPP  
Subjt:  SVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD----------------FKPDHIQFLKDLEEPSESIFVDPPPTA

Query:  TFKLNADASHISATGCGGVGWTIRGSERSLILAG
         +K+N D S+ + +G G  G  IRG +   + AG
Subjt:  TFKLNADASHISATGCGGVGWTIRGSERSLILAG

PNX96793.1 ribonuclease H, partial [Trifolium pratense]2.5e-3129.2Show/hide
Query:  KGYRLRVGRGNHISIDQEPRINRKG-SKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGIFSVKSAY
        KG    +G G   +I ++  I +KG S R    P++    +V +L+   +  WNE +I++ F   DA  IL IP+ ++   D + W ++  GI+SVKS Y
Subjt:  KGYRLRVGRGNHISIDQEPRINRKG-SKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGIFSVKSAY

Query:  HLAVNLEEAKDASNSLPTPTSL-AWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSVFFPNLLSL
        H  ++ +   + +N+  +   +  WK LW  K+ P+    +W+IL N IP K NL +K +  +PLC  C + VES QH+  EC+++K VW   F + L+L
Subjt:  HLAVNLEEAKDASNSLPTPTSL-AWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSVFFPNLLSL

Query:  LAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD------------FKPDH-------IQFLKDLEEP------SESIFVDPPPTAT
                D Y ++  +T   + + +   +  ++++W +RN    Q+            FK  H       ++  K    P      S +I   PP   T
Subjt:  LAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD------------FKPDH-------IQFLKDLEEP------SESIFVDPPPTAT

Query:  FKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKG
         K+N DA H+S+ G    G  +R S+ S + A  +++KG
Subjt:  FKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKG

XP_023920731.1 uncharacterized protein LOC112032201 [Quercus suber]7.9e-3333.74Show/hide
Query:  GYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGH-RVCKLITYH-GSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGIFSVKSAYH
        GYR +VG G +I I ++  + R  + R+L  P  L    +V  LI  + G WNE LI + F P+D + IL IPL    P D IIWA +PKG F+V SAY 
Subjt:  GYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGH-RVCKLITYH-GSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGIFSVKSAYH

Query:  LAVNLEEAK-DASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW-SVFFPNLLSL
        +A+++ +   DA  S        W+++WNL+I  + K+  W+  KNI+P+K NL  + +  N  C  C    E+T HL W+C  +K VW S   P     
Subjt:  LAVNLEEAK-DASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW-SVFFPNLLSL

Query:  LAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNK----AARQDFKPDHIQFLKDLEE-------PSE-----SIFVDPPPTATFKLNADASH
          I   D   +L+    T+ +  E +   +   W +W  RNK    AARQ  +   ++    L E       PS+      I   PP    +K N DA+ 
Subjt:  LAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNK----AARQDFKPDHIQFLKDLEE-------PSE-----SIFVDPPPTATFKLNADASH

Query:  ISATGCGGVGWTIRGSERSLILAGHK
          + G  GVG  IR    S++ A  K
Subjt:  ISATGCGGVGWTIRGSERSLILAGHK

XP_024190234.1 uncharacterized protein LOC112194221 [Rosa chinensis]4.2e-3429.13Show/hide
Query:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGI
        L+WGRDL I G R RVG G +I +  +  +    + R +         +V +L+ Y G WNE LI   F P +   ILSIP+     +D I+W     G 
Subjt:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGI

Query:  FSVKSAYHLAVNLEEAKD----ASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW
        ++VKS   LA  L+   +     SNS     +  W  LW L+I  + K+ +W+  K  +P   NL ++ +  + LC  C  + E+T H +W C +SK VW
Subjt:  FSVKSAYHLAVNLEEAKD----ASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW

Query:  SVFFPNLLSLLAICKADGDPYL--FWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQDF--KPDHIQF--------LKDLEEPSESIFVD---------
           F N      + K   +P     +  + K    EE+    +  W LW  RN+   +    +  HI +         +D +  +E++  D         
Subjt:  SVFFPNLLSLLAICKADGDPYL--FWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQDF--KPDHIQF--------LKDLEEPSESIFVD---------

Query:  --PPPTATFKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKGNWPILALKQL
          PP     KLN DA+         +G  +R  E  L  AGHK+  GN  I+A++ L
Subjt:  --PPPTATFKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKGNWPILALKQL

XP_030931246.1 uncharacterized protein LOC115957168 [Quercus lobata]3.9e-3229.53Show/hide
Query:  SSY---GLLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGH-RVCKLITYH-GSWNEDLIHEKFLPQDASDILSIPLGERNPNDEI
        SSY    +L  +++   G   RVG G  I +  E  I    S  +++ P++++   RV +LI ++ G+WN++LI  KF  +DA  IL IPL  R   D I
Subjt:  SSY---GLLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGH-RVCKLITYH-GSWNEDLIHEKFLPQDASDILSIPLGERNPNDEI

Query:  IWAESPKGIFSVKSAYHLA--VNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWEC
         W  +    +SVKS Y +A  V  E +    +S+   + L W+K+W + I  + K+ VW+    I+P++ NL+QK +  +  CVLC+   E+  H+LWEC
Subjt:  IWAESPKGIFSVKSAYHLA--VNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWEC

Query:  KFSKSVWSVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAA------------------RQDFKPDHIQFLKDLEEPSES
          ++ +W+     L       +   D     EEL  +L  EEL    +  W +WT RN                      ++FK   +Q          S
Subjt:  KFSKSVWSVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAA------------------RQDFKPDHIQFLKDLEEPSES

Query:  IFVDPPPTATFKLNADASHISATGCGGVGWTIRGSERSLILA
         ++ PPP  ++KLN DA+        G G  IR +   ++ A
Subjt:  IFVDPPPTATFKLNADASHISATGCGGVGWTIRGSERSLILA

TrEMBL top hitse value%identityAlignment
A0A2K3N168 Ribonuclease H (Fragment)1.2e-3129.2Show/hide
Query:  KGYRLRVGRGNHISIDQEPRINRKG-SKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGIFSVKSAY
        KG    +G G   +I ++  I +KG S R    P++    +V +L+   +  WNE +I++ F   DA  IL IP+ ++   D + W ++  GI+SVKS Y
Subjt:  KGYRLRVGRGNHISIDQEPRINRKG-SKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGIFSVKSAY

Query:  HLAVNLEEAKDASNSLPTPTSL-AWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSVFFPNLLSL
        H  ++ +   + +N+  +   +  WK LW  K+ P+    +W+IL N IP K NL +K +  +PLC  C + VES QH+  EC+++K VW   F + L+L
Subjt:  HLAVNLEEAKDASNSLPTPTSL-AWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSVFFPNLLSL

Query:  LAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD------------FKPDH-------IQFLKDLEEP------SESIFVDPPPTAT
                D Y ++  +T   + + +   +  ++++W +RN    Q+            FK  H       ++  K    P      S +I   PP   T
Subjt:  LAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD------------FKPDH-------IQFLKDLEEP------SESIFVDPPPTAT

Query:  FKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKG
         K+N DA H+S+ G    G  +R S+ S + A  +++KG
Subjt:  FKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKG

A0A2N9I4S0 Uncharacterized protein2.1e-3129.64Show/hide
Query:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGS--WNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPK
        +L  R++   G R RVG G +I I ++  I  + + ++      L+ +     + +  +  WN  LI   F   +A  I SIPL  R+  D IIW+E+  
Subjt:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGS--WNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPK

Query:  GIFSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSV
        G++SV+SAYHL +  ++  ++SN+  +  +  WK +WN  +  + K+ +WK  KNI+P+KLNL +K    +  C LC + +ES  H+L +CKF++ VW  
Subjt:  GIFSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSV

Query:  FFPNLLSLLAICKADGDPYLFWEEL---TKRLEDEELSNAMIPMWKLWTLRNK-------AARQDFKPDHIQFLKDL---EEPSESIFV------DPPPT
             LS+LA  +     + F + +    + L   ++       WKLW  RN         A +D        + D    E+ S           +PP  
Subjt:  FFPNLLSLLAICKADGDPYLFWEEL---TKRLEDEELSNAMIPMWKLWTLRNK-------AARQDFKPDHIQFLKDL---EEPSESIFV------DPPPT

Query:  ATFKLNADASHISATGCGGVGWTIRGSERSLILA
        + +K+N      S T  GG G  IR S  S+I A
Subjt:  ATFKLNADASHISATGCGGVGWTIRGSERSLILA

A0A803QAN3 Uncharacterized protein2.1e-3135.2Show/hide
Query:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRI-NRKGSKRLLYT-PEDLKGHRVCKLITYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPK
        + WGRDL ++G R ++G+G +I+   +P I +    K + YT P  L    V   IT    WN D+++E F P D   ILSIPL      D +IW  S  
Subjt:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRI-NRKGSKRLLYT-PEDLKGHRVCKLITYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPK

Query:  GIFSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSV
        GI++VKS +HLA +LEE   +S S   P    W+  WNL + P+ +I  WK+  NI+P    L +K +  +  C LC S  ES  H L+ CK +K +W+ 
Subjt:  GIFSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSV

Query:  FFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNK
           +L    A    +GD  L+   L+     E+    +  MW +W+ RN+
Subjt:  FFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNK

A0A803QQT2 Uncharacterized protein2.9e-3329.46Show/hide
Query:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGI
        L+WG+ L +KGYR RVG G  + + ++P + R  + ++   P       V  L    G W+E  I   F P D   IL IP  + +  D+I+W  S  G 
Subjt:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGI

Query:  FSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKV-ESTQHLLWECKFSKSVWSV-
        +SVKS Y +A +    +  SN         WKKLW LKI P+ K  VWK+  N +P+ +NL ++ +  + +C  C S V ES  H LWECK SK  W V 
Subjt:  FSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKV-ESTQHLLWECKFSKSVWSV-

Query:  -FFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQDF--KPDHI-----QFLKDL---------EEPSESIFVDPPPTAT
          + +L  +L       D       +    + E+L   ++  W +W +RN      +  KP+ +      FL D          +  SE     PP    
Subjt:  -FFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQDF--KPDHI-----QFLKDL---------EEPSESIFVDPPPTAT

Query:  FKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKGNWPILALKQLQSKK
          +N DA         G+G+ +R +   ++ A   + +   P L L+ +  KK
Subjt:  FKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKGNWPILALKQLQSKK

I6M4U0 Putative ZmL1 non-LTR retrotransposon protein5.5e-3229.34Show/hide
Query:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKG
        +L G  L  +G   R+G GN ++I  +P I R  ++R++        H+V +LI    GSW+  L+ + FL +DA  IL+IP+ E    D + W   PKG
Subjt:  LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLI-TYHGSWNEDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKG

Query:  IFSVKSAYHLAVNLEE---AKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW
         FSVKSAY LA    +     DAS+S+       WK +WN+ +  + K+ +W++  N  P ++N+ ++ + I  LC +C    E   HL  +CK  K VW
Subjt:  IFSVKSAYHLAVNLEE---AKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVW

Query:  SVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD----------------FKPDHIQFLKDLEEPSESIFVDPPPTA
                  L   KA     +   E    L +E     ++ +W  W+ RNK  + +                   + +Q  K    P  ++   PPP  
Subjt:  SVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQD----------------FKPDHIQFLKDLEEPSESIFVDPPPTA

Query:  TFKLNADASHISATGCGGVGWTIRGSERSLILAG
         +K+N D S+ + +G G  G  IRG +   + AG
Subjt:  TFKLNADASHISATGCGGVGWTIRGSERSLILAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.7e-0530Show/hide
Query:  WKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSVF------FPNLL
        +K +W    IP+     W  +++ + +K  +I       PLC+ C +  E+ QHL ++C+F++ VW  F      FP LL
Subjt:  WKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWSVF------FPNLL

AT3G09510.1 Ribonuclease H-like superfamily protein4.9e-1726.91Show/hide
Query:  SYG---LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGS---WNEDLIHEKFLPQDASDILSIPLGERNPNDEI
        SYG   LL G  L  KG R  +G G +I I  +  I      R L T E  K   +  L    GS   W++  I +     D   I  I L +    D+I
Subjt:  SYG---LLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGS---WNEDLIHEKFLPQDASDILSIPLGERNPNDEI

Query:  IWAESPKGIFSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKF
        IW  +  G ++V+S Y L  +       + + P  +     ++WNL I+P+ K  +W+ L   + +   L  + M I+P C  C  + ES  H L+ C F
Subjt:  IWAESPKGIFSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKF

Query:  SKSVWSVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELS--NAMIPMWKLWTLRNKAARQDFKPDHIQFLKDLEEPSESIFVDPPPTATFKLNADAS
        +   W +   +L+    +   D +  +    +   ++D  +S  + ++P+W +W  R   AR     +++ F K  E PS+++      T  + LNA  S
Subjt:  SKSVWSVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELS--NAMIPMWKLWTLRNKAARQDFKPDHIQFLKDLEEPSESIFVDPPPTATFKLNADAS

Query:  H
        H
Subjt:  H

AT3G25270.1 Ribonuclease H-like superfamily protein1.2e-0726.12Show/hide
Query:  KLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWS--------------VFFPNLLSLLAICKADGDPYL
        K+W LK  P+ K  +WK+L   + +  NL ++ +  +P C  C  + E++QHL ++C +++ VW                    +  LL+ C A+  P L
Subjt:  KLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSKSVWS--------------VFFPNLLSLLAICKADGDPYL

Query:  FWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQ
        F             + A+  +W+LW  RN+   Q
Subjt:  FWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQ

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.9e-0736.67Show/hide
Query:  LWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSK
        +W+LKI P+ K+ +WK L N +P    L+ + + I P C  CR   E+  H+L+ C F++
Subjt:  LWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSKVESTQHLLWECKFSK

AT4G29090.1 Ribonuclease H-like superfamily protein1.6e-1521.64Show/hide
Query:  PIPSSYGLLW-----GRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLL----YTPEDLKG----HRVCKLITYHG-SWNEDLIHEKFLPQDASDILS
        P+ S    +W      +++  +G R  VG G  I I +   ++ K +   L      P++        +V  LI   G  W +D+I   F   +   I  
Subjt:  PIPSSYGLLW-----GRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLL----YTPEDLKG----HRVCKLITYHG-SWNEDLIHEKFLPQDASDILS

Query:  IPLGERNPNDEIIWAESPKGIFSVKSAYHLAVNLEEAKDASNSLPTPT-SLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSK
        +  G R   D   W  +  G ++VKS Y +   +   + +   +  P+ +  ++K+W  +  P+ +  +WK L N +P    L  + +     C+ C S 
Subjt:  IPLGERNPNDEIIWAESPKGIFSVKSAYHLAVNLEEAKDASNSLPTPT-SLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPLCVLCRSK

Query:  VESTQHLLWECKFSKSVWSV--------------FFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIP--MWKLWTLRNKAARQDFKPDHIQFL
         E+  HLL++C F++  W++               + NL  +  +   +G+P   WE+          ++ ++P  +W+LW  RN+   +  + +  + L
Subjt:  VESTQHLLWECKFSKSVWSV--------------FFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIP--MWKLWTLRNKAARQDFKPDHIQFL

Query:  K----DLEE-----PSESIFVD------------PPPTATFKLNADASHISATGCGGVGWTIRGSERSLILAGHK------------LYKGNWPILALKQ
        +    DLEE      +ES                PPP    K N DA+        G+GW +R  +  +   G +            L    W +L+L +
Subjt:  K----DLEE-----PSESIFVD------------PPPTATFKLNADASHISATGCGGVGWTIRGSERSLILAGHK------------LYKGNWPILALKQ

Query:  LQ
         Q
Subjt:  LQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTGGATCAGAAAAGTCATGCGGTGTATCAAATCTGTGGAGTGCTCGGTCTTGGTTAATGGCCAACCTTTCAAGTCCTTCAAACCTGAGAGAGGCATCAGGCAA
GGGGACCTGCTCTCCCCCTATCCCTTCCTCCTATGGCCTTTTATGGGGAAGAGATCTATTTATCAAAGGTTATAGATTGAGGGTGGGAAGAGGAAACCATATCTCTATTG
ACCAGGAGCCTAGGATCAACAGAAAGGGTAGCAAACGTCTCCTTTACACTCCTGAAGACCTTAAGGGCCATCGAGTTTGTAAGCTGATCACATACCATGGTTCCTGGAAT
GAAGATCTAATTCATGAAAAATTCTTACCCCAAGATGCTTCTGACATTTTATCCATCCCCCTGGGTGAAAGGAATCCTAACGATGAAATCATTTGGGCAGAGAGCCCTAA
AGGGATCTTCTCAGTTAAATCAGCCTATCACCTTGCTGTTAACCTGGAAGAAGCTAAAGATGCATCCAACTCTTTGCCAACCCCAACCTCTCTTGCCTGGAAGAAGCTTT
GGAACCTAAAGATCATCCCACGAGCCAAAATTTGTGTTTGGAAAATTCTAAAAAACATTATTCCTTCCAAACTCAATCTAATTCAAAAAGTGATGGATATTAACCCCCTT
TGTGTTTTATGCAGGAGCAAAGTCGAATCTACCCAACATCTTCTATGGGAATGTAAGTTTTCTAAAAGTGTGTGGTCGGTCTTCTTCCCTAATTTGCTTTCTCTTCTGGC
AATTTGCAAGGCAGATGGGGATCCCTATCTGTTTTGGGAAGAATTAACAAAGAGGCTAGAGGATGAAGAATTAAGCAATGCTATGATTCCTATGTGGAAATTATGGACTC
TCAGAAACAAAGCAGCTAGACAGGACTTCAAGCCAGATCATATCCAATTCCTCAAAGATTTAGAAGAGCCATCAGAGTCAATCTTCGTGGACCCCCCTCCCACAGCGACC
TTCAAGCTGAATGCAGATGCCTCCCATATCAGTGCAACAGGTTGTGGTGGTGTTGGATGGACGATCCGTGGCTCCGAAAGATCTTTGATTCTTGCAGGCCATAAATTATA
CAAAGGAAATTGGCCAATCCTAGCGCTGAAGCAATTGCAATCAAAGAAGGTCTCAAGAATTACCTCTCCCTTTTCTCTGAGGAATCGCCCCCCCTCATTGTCGAATACGA
CTCAGCTCTACTCATCAAAATCCTCAACTGGCAGGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTGGATCAGAAAAGTCATGCGGTGTATCAAATCTGTGGAGTGCTCGGTCTTGGTTAATGGCCAACCTTTCAAGTCCTTCAAACCTGAGAGAGGCATCAGGCAA
GGGGACCTGCTCTCCCCCTATCCCTTCCTCCTATGGCCTTTTATGGGGAAGAGATCTATTTATCAAAGGTTATAGATTGAGGGTGGGAAGAGGAAACCATATCTCTATTG
ACCAGGAGCCTAGGATCAACAGAAAGGGTAGCAAACGTCTCCTTTACACTCCTGAAGACCTTAAGGGCCATCGAGTTTGTAAGCTGATCACATACCATGGTTCCTGGAAT
GAAGATCTAATTCATGAAAAATTCTTACCCCAAGATGCTTCTGACATTTTATCCATCCCCCTGGGTGAAAGGAATCCTAACGATGAAATCATTTGGGCAGAGAGCCCTAA
AGGGATCTTCTCAGTTAAATCAGCCTATCACCTTGCTGTTAACCTGGAAGAAGCTAAAGATGCATCCAACTCTTTGCCAACCCCAACCTCTCTTGCCTGGAAGAAGCTTT
GGAACCTAAAGATCATCCCACGAGCCAAAATTTGTGTTTGGAAAATTCTAAAAAACATTATTCCTTCCAAACTCAATCTAATTCAAAAAGTGATGGATATTAACCCCCTT
TGTGTTTTATGCAGGAGCAAAGTCGAATCTACCCAACATCTTCTATGGGAATGTAAGTTTTCTAAAAGTGTGTGGTCGGTCTTCTTCCCTAATTTGCTTTCTCTTCTGGC
AATTTGCAAGGCAGATGGGGATCCCTATCTGTTTTGGGAAGAATTAACAAAGAGGCTAGAGGATGAAGAATTAAGCAATGCTATGATTCCTATGTGGAAATTATGGACTC
TCAGAAACAAAGCAGCTAGACAGGACTTCAAGCCAGATCATATCCAATTCCTCAAAGATTTAGAAGAGCCATCAGAGTCAATCTTCGTGGACCCCCCTCCCACAGCGACC
TTCAAGCTGAATGCAGATGCCTCCCATATCAGTGCAACAGGTTGTGGTGGTGTTGGATGGACGATCCGTGGCTCCGAAAGATCTTTGATTCTTGCAGGCCATAAATTATA
CAAAGGAAATTGGCCAATCCTAGCGCTGAAGCAATTGCAATCAAAGAAGGTCTCAAGAATTACCTCTCCCTTTTCTCTGAGGAATCGCCCCCCCTCATTGTCGAATACGA
CTCAGCTCTACTCATCAAAATCCTCAACTGGCAGGACTTAG
Protein sequenceShow/hide protein sequence
MKLGSEKSCGVSNLWSARSWLMANLSSPSNLREASGKGTCSPPIPSSYGLLWGRDLFIKGYRLRVGRGNHISIDQEPRINRKGSKRLLYTPEDLKGHRVCKLITYHGSWN
EDLIHEKFLPQDASDILSIPLGERNPNDEIIWAESPKGIFSVKSAYHLAVNLEEAKDASNSLPTPTSLAWKKLWNLKIIPRAKICVWKILKNIIPSKLNLIQKVMDINPL
CVLCRSKVESTQHLLWECKFSKSVWSVFFPNLLSLLAICKADGDPYLFWEELTKRLEDEELSNAMIPMWKLWTLRNKAARQDFKPDHIQFLKDLEEPSESIFVDPPPTAT
FKLNADASHISATGCGGVGWTIRGSERSLILAGHKLYKGNWPILALKQLQSKKVSRITSPFSLRNRPPSLSNTTQLYSSKSSTGRT