| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.8e-169 | 56.01 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
Query: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
SV EVMSLLLTQE++NESKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R NRN+ QCQ+C K G++A R
Subjt: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
Query: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
C+FRY P +N + +SP H N PQM+AM+ A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Subjt: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
Query: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L++GLY+F + PS ++ + + + + S T L
Subjt: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
Query: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
L++WHRRL HP L IVK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S +G+RYYI+FVD +SRYTWI
Subjt: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
Query: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
YFL SKSDA F KFK VE LG SIK+ Q+D G EFK F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Subjt: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| KZV26181.1 hypothetical protein F511_06348 [Dorcoceras hygrometricum] | 1.8e-136 | 46.54 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
MSE QMI C ++ +W+ + Q+F TR+ A++M+ K +LQT++KG +S+K+Y K++ Y+D L+A G + +D IL IL G+G +YES+V +++++
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
Query: GPQSVHEVMSLLLTQENRNES-KLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGR-TWNNRNRIQCQVCGKFGHTAQ
S+ EV +LLL E R E+ ++ TA PSVN+T +P +E+ + Y RGRG GR + RGGR W+N R CQ+CG GH A+
Subjt: GPQSVHEVMSLLLTQENRNES-KLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGR-TWNNRNRIQCQVCGKFGHTAQ
Query: RCYFRYAP---PGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFS
CY+R+ P S + FN+S+ +P A T + + WYPDSGA++H+T+ GNLSV +EY GG++V VGNGAGL I N G S+ +
Subjt: RCYFRYAP---PGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFS
Query: SPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVL
++R F L NLLHVP ITKNLISVS+FA DN V+FEFHP+ C VKD A+ VLL+GTLH GLYRFNL S P+ +Q+ +S + L
Subjt: SPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVL
Query: SVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYT
+ + L+ WH RL HPS+A VK VL ++S N++ FC++C LGK H LPF S T +SAP +++ SDLWGPA+IPS +G RYYI+FVD ++RYT
Subjt: SVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYT
Query: WIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
WIYFLK KS+ F+ F+ + E IKT Q+D GGEF+S ++ S GI HRF+CP+TSKQNG+VERKHRHVVDTGL+LL+H+S+P ++
Subjt: WIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| RVW44519.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.3e-121 | 43.97 | Show/hide |
Query: GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESP
G+++++Y +K++ Y D L+ G + DHIL I+ GLG +YES+++VIS+K S+ V S L+ E R K+SS++ SVN T S S
Subjt: GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESP
Query: KPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------------------SFSPHFN-
N N YPSS F G RG + RG + QCQ+C KFGHT RC++RY P N PA S S N
Subjt: KPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------------------SFSPHFN-
Query: -----QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSIT
+ + +M AM+ P+ + W+PDSGATNH+TH GNL+ G EY G +++H+GNG GL I + G S F S + N+V FL N+L VP+I
Subjt: -----QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSIT
Query: KNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSSTPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHR
KNL+SVSQFARDN V+FEFHP +C+VKD+++ +LLQG LH+GLY+FNLS +S + D T + SL +S + S ++WH+
Subjt: KNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSSTPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHR
Query: RLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALN
RL HP+ IV VL + S + C+AC LGK+H+LPF S TVY+ PLQL+VSDLWGPA I S G+ YY++FVD +SRYTW+YFLK+KS
Subjt: RLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALN
Query: VFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
FL FK E G +KTFQ+D GGEF+S + GI HR +CPHTSKQNGI+ERKHRH+V+ GL LL+ +S+PLKY
Subjt: VFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| RVW60229.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 9.8e-130 | 43.09 | Show/hide |
Query: LHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSV
L Q++ CSS +W+ + Q F +++ A++M K+++Q ++K G+++++Y +K++ Y D L+ G + DHIL I+ GLG +YES+++VIS+K S+
Subjt: LHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSV
Query: HEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQ
V S L+ E R K+SS++ SVN T S S N N YPSS F G RG + RG + QCQ+C KFGHT
Subjt: HEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQ
Query: RCYFRYAPPGPSNNPA------------------SFSPHFN------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGN
RC++RY P N PA S S N + + +M AM+ P+ + W+PDSGATNH+TH GNL+ G EY G +
Subjt: RCYFRYAPPGPSNNPA------------------SFSPHFN------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGN
Query: QVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSS
++H+GNG GL I + G S F S + N+V FL N+L VP+I KNL+SVSQFARDN V+FEFHP +C+VKD+++ +LLQG LH+GLY+FNLS +S
Subjt: QVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSS
Query: STPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIV
+ D T + SL +S + S ++WH+RL HP+ IV VL + S + C+AC LGK+H+LPF S TVY+ PLQL+V
Subjt: STPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIV
Query: SDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVER
SDLWGPA I S G+ YY++FVD +SRYTW+YFLK+KS FL FK E G +KTFQ+D GGEF+S + GI HR +CPHTSKQNGI+ER
Subjt: SDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVER
Query: KHRHVVDTGLALLSHSSMPLKY
KHRH+V+ GL LL+ +S+PLKY
Subjt: KHRHVVDTGLALLSHSSMPLKY
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.8e-169 | 56.01 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
Query: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
SV EVMSLLLTQE++NESKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R NRN+ QCQ+C K G++A R
Subjt: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
Query: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
C+FRY P +N + +SP H N PQM+AM+ A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Subjt: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
Query: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L++GLY+F + PS ++ + + + + S T L
Subjt: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
Query: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
L++WHRRL HP L IVK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S +G+RYYI+FVD +SRYTWI
Subjt: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
Query: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
YFL SKSDA F KFK VE LG SIK+ Q+D G EFK F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Subjt: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z7AWA7 Integrase catalytic domain-containing protein | 8.9e-137 | 46.54 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
MSE QMI C ++ +W+ + Q+F TR+ A++M+ K +LQT++KG +S+K+Y K++ Y+D L+A G + +D IL IL G+G +YES+V +++++
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
Query: GPQSVHEVMSLLLTQENRNES-KLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGR-TWNNRNRIQCQVCGKFGHTAQ
S+ EV +LLL E R E+ ++ TA PSVN+T +P +E+ + Y RGRG GR + RGGR W+N R CQ+CG GH A+
Subjt: GPQSVHEVMSLLLTQENRNES-KLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGR-TWNNRNRIQCQVCGKFGHTAQ
Query: RCYFRYAP---PGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFS
CY+R+ P S + FN+S+ +P A T + + WYPDSGA++H+T+ GNLSV +EY GG++V VGNGAGL I N G S+ +
Subjt: RCYFRYAP---PGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFS
Query: SPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVL
++R F L NLLHVP ITKNLISVS+FA DN V+FEFHP+ C VKD A+ VLL+GTLH GLYRFNL S P+ +Q+ +S + L
Subjt: SPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVL
Query: SVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYT
+ + L+ WH RL HPS+A VK VL ++S N++ FC++C LGK H LPF S T +SAP +++ SDLWGPA+IPS +G RYYI+FVD ++RYT
Subjt: SVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYT
Query: WIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
WIYFLK KS+ F+ F+ + E IKT Q+D GGEF+S ++ S GI HRF+CP+TSKQNG+VERKHRHVVDTGL+LL+H+S+P ++
Subjt: WIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| A0A438EA49 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.2e-122 | 43.97 | Show/hide |
Query: GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESP
G+++++Y +K++ Y D L+ G + DHIL I+ GLG +YES+++VIS+K S+ V S L+ E R K+SS++ SVN T S S
Subjt: GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESP
Query: KPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------------------SFSPHFN-
N N YPSS F G RG + RG + QCQ+C KFGHT RC++RY P N PA S S N
Subjt: KPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------------------SFSPHFN-
Query: -----QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSIT
+ + +M AM+ P+ + W+PDSGATNH+TH GNL+ G EY G +++H+GNG GL I + G S F S + N+V FL N+L VP+I
Subjt: -----QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSIT
Query: KNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSSTPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHR
KNL+SVSQFARDN V+FEFHP +C+VKD+++ +LLQG LH+GLY+FNLS +S + D T + SL +S + S ++WH+
Subjt: KNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSSTPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHR
Query: RLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALN
RL HP+ IV VL + S + C+AC LGK+H+LPF S TVY+ PLQL+VSDLWGPA I S G+ YY++FVD +SRYTW+YFLK+KS
Subjt: RLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALN
Query: VFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
FL FK E G +KTFQ+D GGEF+S + GI HR +CPHTSKQNGI+ERKHRH+V+ GL LL+ +S+PLKY
Subjt: VFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| A0A438FJP6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-130 | 43.09 | Show/hide |
Query: LHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSV
L Q++ CSS +W+ + Q F +++ A++M K+++Q ++K G+++++Y +K++ Y D L+ G + DHIL I+ GLG +YES+++VIS+K S+
Subjt: LHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSV
Query: HEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQ
V S L+ E R K+SS++ SVN T S S N N YPSS F G RG + RG + QCQ+C KFGHT
Subjt: HEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQ
Query: RCYFRYAPPGPSNNPA------------------SFSPHFN------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGN
RC++RY P N PA S S N + + +M AM+ P+ + W+PDSGATNH+TH GNL+ G EY G +
Subjt: RCYFRYAPPGPSNNPA------------------SFSPHFN------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGN
Query: QVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSS
++H+GNG GL I + G S F S + N+V FL N+L VP+I KNL+SVSQFARDN V+FEFHP +C+VKD+++ +LLQG LH+GLY+FNLS +S
Subjt: QVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSS
Query: STPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIV
+ D T + SL +S + S ++WH+RL HP+ IV VL + S + C+AC LGK+H+LPF S TVY+ PLQL+V
Subjt: STPIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIV
Query: SDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVER
SDLWGPA I S G+ YY++FVD +SRYTW+YFLK+KS FL FK E G +KTFQ+D GGEF+S + GI HR +CPHTSKQNGI+ER
Subjt: SDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVER
Query: KHRHVVDTGLALLSHSSMPLKY
KHRH+V+ GL LL+ +S+PLKY
Subjt: KHRHVVDTGLALLSHSSMPLKY
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| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-169 | 56.01 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
Query: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
SV EVMSLLLTQE++NESKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R NRN+ QCQ+C K G++A R
Subjt: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
Query: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
C+FRY P +N + +SP H N PQM+AM+ A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Subjt: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
Query: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L++GLY+F + PS ++ + + + + S T L
Subjt: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
Query: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
L++WHRRL HP L IVK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S +G+RYYI+FVD +SRYTWI
Subjt: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
Query: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
YFL SKSDA F KFK VE LG SIK+ Q+D G EFK F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Subjt: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-169 | 56.01 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKI
Query: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
SV EVMSLLLTQE++NESKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R NRN+ QCQ+C K G++A R
Subjt: GPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQR
Query: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
C+FRY P +N + +SP H N PQM+AM+ A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Subjt: CYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP
Query: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L++GLY+F + PS ++ + + + + S T L
Subjt: TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV
Query: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
L++WHRRL HP L IVK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S +G+RYYI+FVD +SRYTWI
Subjt: SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWI
Query: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
YFL SKSDA F KFK VE LG SIK+ Q+D G EFK F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Subjt: YFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.0e-14 | 21.12 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQ-KGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAK
+S+ L+ + + I L ++ ++LA + ++ +L +++ MSL +F + + L A G ++ D I +L L S Y+ +++ I
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQ-KGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAK
Query: IGPQ-SVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQ
++ V + LL QE + K ++T+ +N V N N Y ++ R + + N++ +++C CG+ GH +
Subjt: IGPQ-SVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQ
Query: RCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPT
C F Y NN + Q+ + M + + + + DSGA++HL + E + V V + + G +++
Subjt: RCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPT
Query: CANRV-----FFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPT
R+ L ++L NL+SV + ++ G+ EF S I K+ + S L++ P
Subjt: CANRV-----FFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPT
Query: V------LSVSGGSDLNVWHRRLDHPSLAIVKSVLR--LQQPQMSINN---DFQFCTACALGKTHSLPF--FPSHTVYSAPLQLIVSDLWGPAYIPSVSG
+ ++ ++ +WH R H S + + R + Q +NN + C C GK LPF T PL ++ SD+ GP ++
Subjt: V------LSVSGGSDLNVWHRRLDHPSLAIVKSVLR--LQQPQMSINN---DFQFCTACALGKTHSLPF--FPSHTVYSAPLQLIVSDLWGPAYIPSVSG
Query: YRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKS--FSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLAL
Y++ FVD F+ Y Y +K KSD ++F F E L + D+G E+ S GIS+ T PHT + NG+ ER R + + +
Subjt: YRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKS--FSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLAL
Query: LSHSSM
+S + +
Subjt: LSHSSM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-33 | 24.14 | Show/hide |
Query: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKG-GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAK
+S+D+++ +I + + IW+ L ++ ++ L + +K +L + G + + + + L+ +G ++ ED + +L+ L S Y+++ + I
Subjt: MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKG-GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAK
Query: IGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSN--RGGRTWNNRNRIQ-----CQVCGK
+ +V S LL E K P+++ + RGR RSS+N R G ++NR + C C +
Subjt: IGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSN--RGGRTWNNRNRIQ-----CQVCGK
Query: FGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPD-----INH----------DTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVH
GH + C P P S N N AAM+ D IN ++ W D+ A++H T +L G V
Subjt: FGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPD-----INH----------DTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVH
Query: VGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKD
+GN + I G T L ++ HVP + NLIS RD +E + + V+ +G LYR N +
Subjt: VGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKD
Query: TAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPS
L+++ +SV ++WH+R+ H S ++ + + + + C C GK H + F S L L+ SD+ GP I S
Subjt: TAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPS
Query: VSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKS--FSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTG
+ G +Y++TF+D SR W+Y LK+K VF KF VE G +K +SD+GGE+ S F +S+GI H T P T + NG+ ER +R +V+
Subjt: VSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKS--FSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTG
Query: LALLSHSSMPLKY
++L + +P +
Subjt: LALLSHSSMPLKY
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| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 2.1e-13 | 25.34 | Show/hide |
Query: LHVPSITKNLISVSQFARDNGVFFEFHPTLCYVK---DQASGRVLLQGTLHEGLYRFNLS--VPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLN
LH P+I +L+S+S+ A N T C+ + +++ G VL H Y + +PS I K T S+S++ P L
Subjt: LHVPSITKNLISVSQFARDNGVFFEFHPTLCYVK---DQASGRVLLQGTLHEGLYRFNLS--VPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLN
Query: VWHRRLDHPSLAIVKSVLR------LQQPQMSINNDFQF-CTACALGK-THSLPFFPSHTVYS---APLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSR
HR L H + ++ L+ L++ + +N + C C +GK T S Y P Q + +D++GP + S Y+I+F D +R
Subjt: VWHRRLDHPSLAIVKSVLR------LQQPQMSINNDFQF-CTACALGK-THSLPFFPSHTVYS---APLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSR
Query: YTWIYFL--KSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEF--KSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMP
+ W+Y L + + LNVF ++N + Q D G E+ K+ + GI+ +T S+ +G+ ER +R +++ LL S +P
Subjt: YTWIYFL--KSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEF--KSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-74 | 33.56 | Show/hide |
Query: IWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQEN
IW L +I+ + + +++T+L+ KG ++ +Y + D L+ +GKP+D ++ + +L L +Y+ ++ I+AK P ++ E+ LL E+
Subjt: IWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQEN
Query: RNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTW----------NNRNRI---QCQVCGKFGHTAQRCYFRY
+ SS T +P VS + + + N GNR ++N + W NN+++ +CQ+CG GH+A+RC
Subjt: RNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTW----------NNRNRI---QCQVCGKFGHTAQRCYFRY
Query: APPGPSNNPASFSPHFNQSNRPNQFP--QMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANR
+ F N P+ F Q A L +W DSGAT+H+T F NLS+ Y GG+ V V +G+ +PI + G +S S+ +R
Subjt: APPGPSNNPASFSPHFNQSNRPNQFP--QMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANR
Query: VFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSD
L+N+L+VP+I KNLISV + NGV EF P VKD +G LLQG + LY + + +SS P+ SL +SP S +
Subjt: VFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSD
Query: LNVWHRRLDHPSLAIVKSVL-RLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLK
+ WH RL HP+ +I+ SV+ ++ ++ F C+ C + K++ +PF S + PL+ I SD+W + I S YRYY+ FVD F+RYTW+Y LK
Subjt: LNVWHRRLDHPSLAIVKSVL-RLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLK
Query: SKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
KS F+ FK +EN I TF SD+GGEF + + +GISH + PHT + NG+ ERKHRH+V+TGL LLSH+S+P Y
Subjt: SKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-70 | 35.66 | Show/hide |
Query: DALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGN
D L+ +GKP+D ++ + +L L DY+ ++ I+AK P S+ E+ L+ +E++ + L+S+E + N+ ++ + + N + N
Subjt: DALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGN
Query: RGRGGGRSSSNRGGRTWNNRNRI---QCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTH
R S+ G R+ N + + +CQ+C GH+A+RC + +N S SP R N L + +W DSGAT+H+T
Subjt: RGRGGGRSSSNRGGRTWNNRNRI---QCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTH
Query: SFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEG
F NLS Y GG+ V + +G+ +PI + G S S PT ++R LN +L+VP+I KNLISV + N V EF P VKD +G LLQG +
Subjt: SFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEG
Query: LYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQ-PQMSINNDFQFCTACALGKTHSLPFFPSHTVY
LY + PI AV S+ +SP + WH RL HPSLAI+ SV+ P ++ ++ C+ C + K+H +PF S
Subjt: LYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQ-PQMSINNDFQFCTACALGKTHSLPFFPSHTVY
Query: SAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTS
S PL+ I SD+W + I S+ YRYY+ FVD F+RYTW+Y LK KS + F+ FK VEN I T SD+GGEF L+ +GISH + PHT
Subjt: SAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTS
Query: KQNGIVERKHRHVVDTGLALLSHSSMPLKY
+ NG+ ERKHRH+V+ GL LLSH+S+P Y
Subjt: KQNGIVERKHRHVVDTGLALLSHSSMPLKY
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.8e-04 | 25 | Show/hide |
Query: SSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLL
S+++ IW + F A+ +++ ++L+T G M + +Y+ K+++ D+L V PV + ++++L+GL ++++++VI + S + ++L
Subjt: SSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLL
Query: LTQENRNESKLSSSET----ALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRS-SSNRGGR-------TWNNRNR
+E+R + + + T + S L S PP + + N G RGRG G + RGGR T+N+ NR
Subjt: LTQENRNESKLSSSET----ALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRS-SSNRGGR-------TWNNRNR
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.2e-08 | 28.8 | Show/hide |
Query: MSEDILHQMIHCSST-KAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAK
+++ +L +I T + +W L +F A+ ++ + +L+T +S+ EY K++ D L+ V P+ ++ +L+GL Y+ +++VI K
Subjt: MSEDILHQMIHCSST-KAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAK
Query: IGPQSVHEVMSLLLTQENR--NESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRS-SSNRGGRT----WNNRN
S E S+LL +E+R N+SK S S T PS++ + P E YP + N G GRS NRGG + +NN N
Subjt: IGPQSVHEVMSLLLTQENR--NESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRS-SSNRGGRT----WNNRN
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 1.1e-06 | 25 | Show/hide |
Query: RVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHS
R +L+G H+ LY +L S+ + + L+ + + +WH RL H S ++ +++ S + +FC C GKTH
Subjt: RVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHS
Query: LPFFPSHTVYSAPLQLIVSDLWGPAYIP
+ F PL + SDLWG +P
Subjt: LPFFPSHTVYSAPLQLIVSDLWGPAYIP
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