; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017673 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017673
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:6634153..6635312
RNA-Seq ExpressionLag0017673
SyntenyLag0017673
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.2e-4351.72Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G++ AIRCR F FTLTGS + WF++LK +SISSFKELARAF+ QF G   + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ

Query:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK
        +  ESL+D + RFN+E  QVEG ++  +L+    G++DE+L+ S GK    T++E  SRAQ YMS  EL++SK+
Subjt:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]4.2e-4353.11Show/hide
Query:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLT
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS A++CR F  TL+GS + WF +LK  SISSFK LA+AF+ QF+G R + +P   LLT
Subjt:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLT

Query:  VKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK
        +KQ+  ESL D + RFNEE  QVEG +    L+A    + DE L  S GK  P T++E +SRAQKYMSA E   SK+
Subjt:  VKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.6e-4249.24Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + +  AIRCR F FTLTGS + WF +LK  SISSFKELA AF+ QF+G R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ

Query:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELL-------------NSKKSGREHKRHSS
        +  ESL++ + RFNEE  QVEG ++   L+A   G++DERL+ S GK  P T+ E +SRAQKYMSA EL+             ++K+  R  KRH S
Subjt:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELL-------------NSKKSGREHKRHSS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.7e-4943.56Show/hide
Query:  EEGLIRDPKKGKELVEAHSSESLEPSTSR-----RTDLRNLIEEKRRSAKAVESEA-KAVEVEARAAEAEARAVEAEAKKDNLPWKTELLNTLKELGNPQ
        E  L+RDPKKGK   E+ + ES     S+      T  R  I + R++ K  +S A    + +     +E  +++ + K  + P  +E  ++ KE G   
Subjt:  EEGLIRDPKKGKELVEAHSSESLEPSTSR-----RTDLRNLIEEKRRSAKAVESEA-KAVEVEARAAEAEARAVEAEAKKDNLPWKTELLNTLKELGNPQ

Query:  GDLQKSKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSF
                    DLEEL+DQ    FTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS A+RCR F  TL GS + WF +LK  SISSF
Subjt:  GDLQKSKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSF

Query:  KELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLN
        K LARAF+ QF+G R + +P   LLT+KQ+  ESLRD + RFNEE  QVEG ++   L+A   G+ DE L  S GK  P T++E +SRAQ+YMSA E   
Subjt:  KELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLN

Query:  SKK
        SK+
Subjt:  SKK

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.5e-4850.46Show/hide
Query:  LNTLKELGNPQGDLQK--SKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKY
        LN  K +  P+   ++   K+ G  DLEEL+ Q    FTEE+M+ +VP KFK+PT KP+DG  +PV HL+AY+ WMD +GVS+AIRCR F  TL GS + 
Subjt:  LNTLKELGNPQGDLQK--SKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKY

Query:  WFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVS
        WF +LK  SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESL D + RFNEE  Q+EG ++   L+A   G+ DE L  S  K  P T++E +S
Subjt:  WFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVS

Query:  RAQKYMSAKELLNSKK
        RAQ+YMSA E   SK+
Subjt:  RAQKYMSAKELLNSKK

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.6e-4351.72Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G++ AIRCR F FTLTGS + WF++LK +SISSFKELARAF+ QF G   + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ

Query:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK
        +  ESL+D + RFN+E  QVEG ++  +L+    G++DE+L+ S GK    T++E  SRAQ YMS  EL++SK+
Subjt:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK

A0A6J1D7D2 uncharacterized protein LOC1110183072.1e-4353.11Show/hide
Query:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLT
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS A++CR F  TL+GS + WF +LK  SISSFK LA+AF+ QF+G R + +P   LLT
Subjt:  EEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLT

Query:  VKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK
        +KQ+  ESL D + RFNEE  QVEG +    L+A    + DE L  S GK  P T++E +SRAQKYMSA E   SK+
Subjt:  VKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLNSKK

A0A6J1DWY0 uncharacterized protein LOC1110252933.3e-4943.56Show/hide
Query:  EEGLIRDPKKGKELVEAHSSESLEPSTSR-----RTDLRNLIEEKRRSAKAVESEA-KAVEVEARAAEAEARAVEAEAKKDNLPWKTELLNTLKELGNPQ
        E  L+RDPKKGK   E+ + ES     S+      T  R  I + R++ K  +S A    + +     +E  +++ + K  + P  +E  ++ KE G   
Subjt:  EEGLIRDPKKGKELVEAHSSESLEPSTSR-----RTDLRNLIEEKRRSAKAVESEA-KAVEVEARAAEAEARAVEAEAKKDNLPWKTELLNTLKELGNPQ

Query:  GDLQKSKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSF
                    DLEEL+DQ    FTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS A+RCR F  TL GS + WF +LK  SISSF
Subjt:  GDLQKSKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSF

Query:  KELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLN
        K LARAF+ QF+G R + +P   LLT+KQ+  ESLRD + RFNEE  QVEG ++   L+A   G+ DE L  S GK  P T++E +SRAQ+YMSA E   
Subjt:  KELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELLN

Query:  SKK
        SK+
Subjt:  SKK

A0A6J1DZ49 uncharacterized protein LOC1110248517.8e-4349.24Show/hide
Query:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + +  AIRCR F FTLTGS + WF +LK  SISSFKELA AF+ QF+G R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQ

Query:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELL-------------NSKKSGREHKRHSS
        +  ESL++ + RFNEE  QVEG ++   L+A   G++DERL+ S GK  P T+ E +SRAQKYMSA EL+             ++K+  R  KRH S
Subjt:  QPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAKELL-------------NSKKSGREHKRHSS

A0A6J1E1E7 uncharacterized protein LOC1110255487.3e-4950.46Show/hide
Query:  LNTLKELGNPQGDLQK--SKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKY
        LN  K +  P+   ++   K+ G  DLEEL+ Q    FTEE+M+ +VP KFK+PT KP+DG  +PV HL+AY+ WMD +GVS+AIRCR F  TL GS + 
Subjt:  LNTLKELGNPQGDLQK--SKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAFFFTLTGSNKY

Query:  WFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVS
        WF +LK  SISSFK LARAF+ QF+G R + +P   LLT+KQ+  ESL D + RFNEE  Q+EG ++   L+A   G+ DE L  S  K  P T++E +S
Subjt:  WFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVS

Query:  RAQKYMSAKELLNSKK
        RAQ+YMSA E   SK+
Subjt:  RAQKYMSAKELLNSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGGCCGAGGAGCCGAGGCCGACGAGAGGAAGTTGACGCCAAAATCGCCGCCCTTGAGGATAAGGTGAGGGGCATGGATCGAAGTTTGTCCAGGATACTTCA
AATCTTGGATAAACCTGGTCCTAGCACCAAACTCCATGAGGAGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAACTAGTCGAGGCGCACAGTTCTGAGAGCCTAGAAC
CAAGTACCAGCCGTAGAACAGACCTGAGAAACCTAATTGAAGAGAAGCGTAGAAGTGCCAAAGCTGTCGAGTCCGAGGCCAAAGCTGTCGAAGTTGAAGCCAGGGCTGCC
GAGGCCGAGGCCAGAGCAGTCGAGGCCGAGGCTAAGAAGGACAATCTCCCTTGGAAAACTGAGCTTCTGAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTACA
GAAGTCAAAGGACCTTGGAGAACAAGACTTGGAAGAACTGATCGATCAAGTCGCCCCGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAAGTAC
CTACATTCAAACCGTATGATGGCAAAAAAGACCCCGTGCAGCATCTAAACGCCTACAAAAACTGGATGGATTTTCACGGCGTCTCAAATGCAATCAGATGTCGAGCATTC
TTTTTCACTCTGACAGGATCAAACAAGTACTGGTTTGAAAGGTTGAAAAGTAGATCCATAAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTTGCGCAGTTTATGGGAGC
CAGAGAACAGTGCAAGCCTAATATCAACCTCTTAACCGTCAAACAACAGCCAGGTGAGAGCTTGCGCGATTGTATAACACGTTTTAATGAGGAAGTACGACAGGTTGAGG
GATATAGTGAGGAAGCAATCCTAGTAGCCATCACAGTGGGACTAGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTTTCC
CGGGCGCAGAAATACATGAGCGCAAAGGAGTTGCTCAATTCAAAGAAGTCAGGACGAGAGCACAAGAGACATTCTTCAGTCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGGCCGAGGAGCCGAGGCCGACGAGAGGAAGTTGACGCCAAAATCGCCGCCCTTGAGGATAAGGTGAGGGGCATGGATCGAAGTTTGTCCAGGATACTTCA
AATCTTGGATAAACCTGGTCCTAGCACCAAACTCCATGAGGAGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAACTAGTCGAGGCGCACAGTTCTGAGAGCCTAGAAC
CAAGTACCAGCCGTAGAACAGACCTGAGAAACCTAATTGAAGAGAAGCGTAGAAGTGCCAAAGCTGTCGAGTCCGAGGCCAAAGCTGTCGAAGTTGAAGCCAGGGCTGCC
GAGGCCGAGGCCAGAGCAGTCGAGGCCGAGGCTAAGAAGGACAATCTCCCTTGGAAAACTGAGCTTCTGAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTACA
GAAGTCAAAGGACCTTGGAGAACAAGACTTGGAAGAACTGATCGATCAAGTCGCCCCGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAAGTAC
CTACATTCAAACCGTATGATGGCAAAAAAGACCCCGTGCAGCATCTAAACGCCTACAAAAACTGGATGGATTTTCACGGCGTCTCAAATGCAATCAGATGTCGAGCATTC
TTTTTCACTCTGACAGGATCAAACAAGTACTGGTTTGAAAGGTTGAAAAGTAGATCCATAAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTTGCGCAGTTTATGGGAGC
CAGAGAACAGTGCAAGCCTAATATCAACCTCTTAACCGTCAAACAACAGCCAGGTGAGAGCTTGCGCGATTGTATAACACGTTTTAATGAGGAAGTACGACAGGTTGAGG
GATATAGTGAGGAAGCAATCCTAGTAGCCATCACAGTGGGACTAGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTTTCC
CGGGCGCAGAAATACATGAGCGCAAAGGAGTTGCTCAATTCAAAGAAGTCAGGACGAGAGCACAAGAGACATTCTTCAGTCGATTAG
Protein sequenceShow/hide protein sequence
MEKRPRSRGRREEVDAKIAALEDKVRGMDRSLSRILQILDKPGPSTKLHEEGLIRDPKKGKELVEAHSSESLEPSTSRRTDLRNLIEEKRRSAKAVESEAKAVEVEARAA
EAEARAVEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGEQDLEELIDQVAPSFTEEVMKAEVPQKFKVPTFKPYDGKKDPVQHLNAYKNWMDFHGVSNAIRCRAF
FFTLTGSNKYWFERLKSRSISSFKELARAFLAQFMGAREQCKPNINLLTVKQQPGESLRDCITRFNEEVRQVEGYSEEAILVAITVGLEDERLLNSIGKSQPRTYAEFVS
RAQKYMSAKELLNSKKSGREHKRHSSVD