; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017675 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017675
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H protein
Genome locationchr5:6666417..6669245
RNA-Seq ExpressionLag0017675
SyntenyLag0017675
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RYE02783.1 reverse transcriptase-like protein, partial [Rickettsiaceae bacterium]4.9e-0529.27Show/hide
Query:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEF------QTTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEA
        L I   W +WN+RN  + G+   ++ +  +W   +++E+      +T   T   T  R      T      L INVDAA       +G+  IVR   GE 
Subjt:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEF------QTTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEA

Query:  SVAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALL
          +          P  AEA  VL+G++L + +     +I S  L +V MIDE V  +TE+  +L
Subjt:  SVAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALL

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]2.0e-0627.27Show/hide
Query:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRNTVNRGFHYHGTRLVTNK---LIINVDAACDMKSDLYGICIIVRTTNGEASVA
        LLI+G W +W NRN+ VHG       +   W+  + +EF+  N      V      H     T K     IN DA+  ++S   G+ +I+R   G A  A
Subjt:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRNTVNRGFHYHGTRLVTNK---LIINVDAACDMKSDLYGICIIVRTTNGEASVA

Query:  MHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDF
          +     S     EA+  LEG+ LA  +  S V I S    ++ ++ +     TE+ A++      G  +N   +
Subjt:  MHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDF

XP_021805254.1 cysteine-rich receptor-like protein kinase 10 [Prunus avium]8.4e-0526.14Show/hide
Query:  LTFLLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEASVA
        +T + +M AWA+WN RN  V      ++ E  E   R +D+FQ  ++     V+ G H    +     + INV       +   G  ++ R  +G    A
Subjt:  LTFLLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEASVA

Query:  MHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDF
            FP++S P  AEA    E +Q A    F+ + +    LE V  +  +  +++ + AL+ I +      N F F
Subjt:  MHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.3e-0929.48Show/hide
Query:  LLIMGAWAIWNNRNAFVHGKPI-PTEFERCEWVQRYVD---EFQTTNRTLRNTVN-RGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEAS
        L  +  W IWN+RN+ +HGK + P EF +CEW+  ++D   + Q +N + R   N R    +     +  L +N DAAC   S  +G   I+R ++    
Subjt:  LLIMGAWAIWNNRNAFVHGKPI-PTEFERCEWVQRYVD---EFQTTNRTLRNTVN-RGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEAS

Query:  VAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESV----DESTEVLALLWILNCY
         A   + P+   PL AE R +LEG++ A    F+ +++ S  L  + +I   +    DE   V+ +  +  C+
Subjt:  VAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESV----DESTEVLALLWILNCY

XP_023914149.1 uncharacterized protein LOC112025707 [Quercus suber]9.9e-0636.84Show/hide
Query:  AWAIWNNRNAF-VHGKPIPTEFERCEWVQRYVDEFQ---TTNRTLRNTVNR-GFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEASVAMHN
        AW+IWNNRN+F   GK  P +    E V RYV+EFQ    +N T+     R G  +    L      +NVD     ++   G+ ++VR  +G    AM  
Subjt:  AWAIWNNRNAF-VHGKPIPTEFERCEWVQRYVDEFQ---TTNRTLRNTVNR-GFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEASVAMHN

Query:  KFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDI
        K P+   PL AEAR   EG+ LA+ L  ++V I
Subjt:  KFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDI

TrEMBL top hitse value%identityAlignment
A0A4Q3DBE2 Reverse transcriptase-like protein (Fragment)2.4e-0529.27Show/hide
Query:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEF------QTTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEA
        L I   W +WN+RN  + G+   ++ +  +W   +++E+      +T   T   T  R      T      L INVDAA       +G+  IVR   GE 
Subjt:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEF------QTTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEA

Query:  SVAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALL
          +          P  AEA  VL+G++L + +     +I S  L +V MIDE V  +TE+  +L
Subjt:  SVAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALL

A0A5C7H0P0 Uncharacterized protein9.6e-0727.27Show/hide
Query:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRNTVNRGFHYHGTRLVTNK---LIINVDAACDMKSDLYGICIIVRTTNGEASVA
        LLI+G W +W NRN+ VHG       +   W+  + +EF+  N      V      H     T K     IN DA+  ++S   G+ +I+R   G A  A
Subjt:  LLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRNTVNRGFHYHGTRLVTNK---LIINVDAACDMKSDLYGICIIVRTTNGEASVA

Query:  MHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDF
          +     S     EA+  LEG+ LA  +  S V I S    ++ ++ +     TE+ A++      G  +N   +
Subjt:  MHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDF

A0A6J1DX30 uncharacterized protein LOC1110248743.5e-0929.48Show/hide
Query:  LLIMGAWAIWNNRNAFVHGKPI-PTEFERCEWVQRYVD---EFQTTNRTLRNTVN-RGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEAS
        L  +  W IWN+RN+ +HGK + P EF +CEW+  ++D   + Q +N + R   N R    +     +  L +N DAAC   S  +G   I+R ++    
Subjt:  LLIMGAWAIWNNRNAFVHGKPI-PTEFERCEWVQRYVD---EFQTTNRTLRNTVN-RGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEAS

Query:  VAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESV----DESTEVLALLWILNCY
         A   + P+   PL AE R +LEG++ A    F+ +++ S  L  + +I   +    DE   V+ +  +  C+
Subjt:  VAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESV----DESTEVLALLWILNCY

A0A803NGI9 Uncharacterized protein8.7e-0832.24Show/hide
Query:  LIMGAWAIWNNRNAFVHGKP--IPTEFERCEWVQ--RYVDEFQ---TTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEA
        L+   W +WN+RN F+HGKP   PT+     W +   Y   FQ   T+++++R++       H      +KL +NVDAACD+  +  G+ II+R ++G+ 
Subjt:  LIMGAWAIWNNRNAFVHGKP--IPTEFERCEWVQ--RYVDEFQ---TTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEA

Query:  SVAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIF-SYLLELVSMID
          A          P   EA+ +L G+  A R   S +++F S  L LV+ I+
Subjt:  SVAMHNKFPYLSIPLCAEARVVLEGMQLAKRLEFSEVDIF-SYLLELVSMID

A0A803NI87 Uncharacterized protein3.1e-0525.32Show/hide
Query:  WAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRN----TVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEASVAMHNKF
        W +W +RN ++HGKP+ +  +       Y   FQ  + T++N    +          R   N+L +NVDAACD+  +  G+ IIVR ++G+   A    F
Subjt:  WAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRN----TVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEASVAMHNKF

Query:  PYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDFFIS-IDAVYVISEDRDVFWMVNEFQNGTY
                 EA+ +L G+  A         + S  L LV+ I+    +ST +       + +G+L+      +S + +V V    RD     N+  +G  
Subjt:  PYLSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDFFIS-IDAVYVISEDRDVFWMVNEFQNGTY

Query:  RGCCVVVDIPSVNTVVAWGEKRPSMQEMVVDAADEGR
        +   V+ +   VN  +AW     S   +++  +D+ R
Subjt:  RGCCVVVDIPSVNTVVAWGEKRPSMQEMVVDAADEGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTATTGACTTTCCTCCTCATTATGGGAGCGTGGGCTATCTGGAATAATCGTAATGCTTTTGTGCATGGAAAGCCTATCCCAACAGAATTTGAACGGTGTGAATG
GGTGCAAAGATACGTTGATGAGTTTCAGACAACAAACAGGACGTTACGAAATACTGTGAATCGTGGATTCCATTATCATGGTACAAGGCTGGTAACGAACAAGCTAATTA
TTAATGTTGATGCAGCTTGTGATATGAAGAGTGATTTGTATGGTATTTGTATTATAGTAAGGACAACGAATGGGGAGGCTAGTGTAGCAATGCATAACAAGTTCCCATAT
TTATCAATCCCATTATGTGCGGAAGCGAGAGTAGTTTTGGAGGGGATGCAGCTTGCTAAGCGGTTGGAGTTTTCAGAGGTTGATATATTCTCATACTTGCTTGAGTTGGT
TTCCATGATTGATGAATCTGTGGACGAGTCCACAGAAGTTCTTGCTTTATTGTGGATATTAAACTGTTACGGCAATCTTTTAAATCAATTTGATTTCTTCATATCAATAG
ACGCCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAAT
ACTGTCGTCGCGTGGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGACGGAGATGGTTCGTCGGCGTGGTATGAGAG
GGGGAGAAGCGATCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGACACGGCGGAGATGGTTCGTCGGCGTGGTGTGAGAGGTAGTATGTCTTCGG
ATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTATTGACTTTCCTCCTCATTATGGGAGCGTGGGCTATCTGGAATAATCGTAATGCTTTTGTGCATGGAAAGCCTATCCCAACAGAATTTGAACGGTGTGAATG
GGTGCAAAGATACGTTGATGAGTTTCAGACAACAAACAGGACGTTACGAAATACTGTGAATCGTGGATTCCATTATCATGGTACAAGGCTGGTAACGAACAAGCTAATTA
TTAATGTTGATGCAGCTTGTGATATGAAGAGTGATTTGTATGGTATTTGTATTATAGTAAGGACAACGAATGGGGAGGCTAGTGTAGCAATGCATAACAAGTTCCCATAT
TTATCAATCCCATTATGTGCGGAAGCGAGAGTAGTTTTGGAGGGGATGCAGCTTGCTAAGCGGTTGGAGTTTTCAGAGGTTGATATATTCTCATACTTGCTTGAGTTGGT
TTCCATGATTGATGAATCTGTGGACGAGTCCACAGAAGTTCTTGCTTTATTGTGGATATTAAACTGTTACGGCAATCTTTTAAATCAATTTGATTTCTTCATATCAATAG
ACGCCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAAT
ACTGTCGTCGCGTGGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGACGGAGATGGTTCGTCGGCGTGGTATGAGAG
GGGGAGAAGCGATCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGACACGGCGGAGATGGTTCGTCGGCGTGGTGTGAGAGGTAGTATGTCTTCGG
ATTGA
Protein sequenceShow/hide protein sequence
MVVLTFLLIMGAWAIWNNRNAFVHGKPIPTEFERCEWVQRYVDEFQTTNRTLRNTVNRGFHYHGTRLVTNKLIINVDAACDMKSDLYGICIIVRTTNGEASVAMHNKFPY
LSIPLCAEARVVLEGMQLAKRLEFSEVDIFSYLLELVSMIDESVDESTEVLALLWILNCYGNLLNQFDFFISIDAVYVISEDRDVFWMVNEFQNGTYRGCCVVVDIPSVN
TVVAWGEKRPSMQEMVVDAADEGRWHDGDGSSAWYERGRSDRACKRWLSTRRMKVVDTAEMVRRRGVRGSMSSD