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Lag0017704 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017704
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:7283268..7284378
RNA-Seq ExpressionLag0017704
SyntenyLag0017704
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4347816.1 hypothetical protein G4B88_012929 [Cannabis sativa]1.0e-1240.74Show/hide
Query:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK
        RL  +  LPWI  GDFN+I   +EK+ G++RS + M  F+ AL RC+LA+LG     FTW+ + +GG  + ERLDR+  N ++  LF      PF  +L 
Subjt:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK

Query:  KHQENSNN
            NS++
Subjt:  KHQENSNN

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]3.1e-1432.57Show/hide
Query:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK
        RL  +  LPWI  GDFN+I   +EK+ G++RS + M  F+ AL RC+LA+LG     FTW+ + +GG  + ERLDR+  N ++  LF      PF  +L 
Subjt:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK

Query:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG
            NS++        P  + +E V R Q  + K C  +     K      I + +   +  PLA +   +++ G
Subjt:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]3.1e-1432.57Show/hide
Query:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK
        RL  +  LPWI  GDFN+I   +EK+ G++RS + M  F+ AL RC+LA+LG     FTW+ + +GG  + ERLDR+  N ++  LF      PF  +L 
Subjt:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK

Query:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG
            NS++        P  + +E V R Q  + K C  +     K      I + +   +  PLA +   +++ G
Subjt:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG

KAF8391778.1 hypothetical protein HHK36_022012 [Tetracentron sinense]7.7e-1328.81Show/hide
Query:  MERLSGISYLPWIIEGDFNKIFFADEKRG-AERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTI
        M  LS    +PW+  GDFN+I  A+EK G  E++   M  F+ A+  C+L +LG   N FTW K+      + ERLDR +A   +  LF      PF T+
Subjt:  MERLSGISYLPWIIEGDFNKIFFADEKRG-AERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTI

Query:  LKKHQENSNNLNPPPIREPFESPVEAVRPQLLEIKLCAAWFEKDDKGGI---AWTICDS------------NRNKMQLPLAV-----ESDYVEVVGAFNR
          KH  + +  +  P+   F+     +  +    +  A W    +   I   AWT C                 K  L L +     ESD +  + A   
Subjt:  LKKHQENSNNLNPPPIREPFESPVEAVRPQLLEIKLCAAWFEKDDKGGI---AWTICDS------------NRNKMQLPLAV-----ESDYVEVVGAFNR

Query:  ELEDQSELCFFVEEIQLLSSSLGISSLSKCSRKNNSLAHDLAR
        + E+ S     +++++ L  S    S S   R+ NS+AH LAR
Subjt:  ELEDQSELCFFVEEIQLLSSSLGISSLSKCSRKNNSLAHDLAR

XP_017613541.1 PREDICTED: uncharacterized protein LOC108458646 [Gossypium arboreum]2.2e-1232.29Show/hide
Query:  LPWIIEGDFNKIFFADEKRGA-ERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLF--GNIGIDPFRT--------
        LPWI+ GDFN+I ++ EK G  +R Q  MEAFR  L    L ++G   N FTW +     T I ERLDR +AN+K+ +LF  GNI   P+ T        
Subjt:  LPWIIEGDFNKIFFADEKRGA-ERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLF--GNIGIDPFRT--------

Query:  -ILKKHQENSNNLNPPPIREPFESPVEAVRPQLL-EIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVGAFNRELEDQSELC
              +E  + +    I       +E  + +L  E +    W    DK    +  C S R +      +ESD         RE+ D +E+C
Subjt:  -ILKKHQENSNNLNPPPIREPFESPVEAVRPQLL-EIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVGAFNRELEDQSELC

TrEMBL top hitse value%identityAlignment
A0A2N9I5P9 Uncharacterized protein1.2e-1141.28Show/hide
Query:  LPWIIEGDFNKIFFADEKRGAE-RSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILKKHQENSN
        LPW++ GDFN+I   DEK G E RS   M AFR AL  C+L +LG     FTW  R   G  +  RLDR +AND + SLF    +     +   H     
Subjt:  LPWIIEGDFNKIFFADEKRGAE-RSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILKKHQENSN

Query:  NLNPPPIRE
        + NPP I++
Subjt:  NLNPPPIRE

A0A6P4MF11 uncharacterized protein LOC1084586461.1e-1232.29Show/hide
Query:  LPWIIEGDFNKIFFADEKRGA-ERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLF--GNIGIDPFRT--------
        LPWI+ GDFN+I ++ EK G  +R Q  MEAFR  L    L ++G   N FTW +     T I ERLDR +AN+K+ +LF  GNI   P+ T        
Subjt:  LPWIIEGDFNKIFFADEKRGA-ERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLF--GNIGIDPFRT--------

Query:  -ILKKHQENSNNLNPPPIREPFESPVEAVRPQLL-EIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVGAFNRELEDQSELC
              +E  + +    I       +E  + +L  E +    W    DK    +  C S R +      +ESD         RE+ D +E+C
Subjt:  -ILKKHQENSNNLNPPPIREPFESPVEAVRPQLL-EIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVGAFNRELEDQSELC

A0A7J6DPD3 CCHC-type domain-containing protein4.9e-1340.74Show/hide
Query:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK
        RL  +  LPWI  GDFN+I   +EK+ G++RS + M  F+ AL RC+LA+LG     FTW+ + +GG  + ERLDR+  N ++  LF      PF  +L 
Subjt:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK

Query:  KHQENSNN
            NS++
Subjt:  KHQENSNN

A0A7J6GGL8 CCHC-type domain-containing protein1.5e-1432.57Show/hide
Query:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK
        RL  +  LPWI  GDFN+I   +EK+ G++RS + M  F+ AL RC+LA+LG     FTW+ + +GG  + ERLDR+  N ++  LF      PF  +L 
Subjt:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK

Query:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG
            NS++        P  + +E V R Q  + K C  +     K      I + +   +  PLA +   +++ G
Subjt:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG

A0A7J6GL46 CCHC-type domain-containing protein1.5e-1432.57Show/hide
Query:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK
        RL  +  LPWI  GDFN+I   +EK+ G++RS + M  F+ AL RC+LA+LG     FTW+ + +GG  + ERLDR+  N ++  LF      PF  +L 
Subjt:  RLSGISYLPWIIEGDFNKIFFADEKR-GAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILK

Query:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG
            NS++        P  + +E V R Q  + K C  +     K      I + +   +  PLA +   +++ G
Subjt:  KHQENSNNLNPPPIREPFESPVEAV-RPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGTTAAGTGGCATATCTTATCTCCCCTGGATTATCGAGGGAGATTTTAACAAGATCTTTTTTGCTGATGAAAAGAGAGGAGCGGAAAGGAGCCAAAACCTCAT
GGAGGCATTCCGTGTGGCTTTGGGTAGATGCAATTTAGCAAATCTGGGAGCCCCTAGAAACATGTTCACTTGGATGAAAAGGGTGAGAGGGGGTACGACCATTGCAGAAA
GACTGGACCGTTTCTTGGCAAACGACAAGTTTAGATCTTTGTTTGGAAATATTGGCATCGATCCATTCAGAACAATATTGAAGAAACATCAAGAAAATTCAAACAATCTC
AACCCCCCTCCAATTCGAGAACCATTCGAGTCACCCGTGGAAGCCGTCAGACCCCAACTTTTGGAAATTAAACTATGTGCCGCCTGGTTCGAGAAGGACGACAAGGGTGG
GATTGCGTGGACCATTTGTGACTCCAACAGGAATAAGATGCAACTACCTCTGGCTGTTGAATCAGATTACGTCGAGGTCGTGGGGGCTTTCAATCGCGAGCTTGAAGACC
AATCGGAGCTTTGTTTTTTTGTTGAAGAAATCCAGTTGCTCTCGTCGTCGTTGGGTATCTCGTCTCTCTCCAAGTGCTCGAGGAAGAACAACTCTTTGGCTCACGATCTG
GCTCGAGCGATAGCAAAAAATGGGAATTTCGGTTTTTTTGGTTCTCATCTTCTCTACGGGGAAGAGGACGATCAATTTAGAAGGGAAAAGTCTTTCCCCTTTTGGTTCTC
ATCATGTATTCCCTATGAGTTTGGTGTATTTAACATTTTAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGTTAAGTGGCATATCTTATCTCCCCTGGATTATCGAGGGAGATTTTAACAAGATCTTTTTTGCTGATGAAAAGAGAGGAGCGGAAAGGAGCCAAAACCTCAT
GGAGGCATTCCGTGTGGCTTTGGGTAGATGCAATTTAGCAAATCTGGGAGCCCCTAGAAACATGTTCACTTGGATGAAAAGGGTGAGAGGGGGTACGACCATTGCAGAAA
GACTGGACCGTTTCTTGGCAAACGACAAGTTTAGATCTTTGTTTGGAAATATTGGCATCGATCCATTCAGAACAATATTGAAGAAACATCAAGAAAATTCAAACAATCTC
AACCCCCCTCCAATTCGAGAACCATTCGAGTCACCCGTGGAAGCCGTCAGACCCCAACTTTTGGAAATTAAACTATGTGCCGCCTGGTTCGAGAAGGACGACAAGGGTGG
GATTGCGTGGACCATTTGTGACTCCAACAGGAATAAGATGCAACTACCTCTGGCTGTTGAATCAGATTACGTCGAGGTCGTGGGGGCTTTCAATCGCGAGCTTGAAGACC
AATCGGAGCTTTGTTTTTTTGTTGAAGAAATCCAGTTGCTCTCGTCGTCGTTGGGTATCTCGTCTCTCTCCAAGTGCTCGAGGAAGAACAACTCTTTGGCTCACGATCTG
GCTCGAGCGATAGCAAAAAATGGGAATTTCGGTTTTTTTGGTTCTCATCTTCTCTACGGGGAAGAGGACGATCAATTTAGAAGGGAAAAGTCTTTCCCCTTTTGGTTCTC
ATCATGTATTCCCTATGAGTTTGGTGTATTTAACATTTTAGTTTAA
Protein sequenceShow/hide protein sequence
MERLSGISYLPWIIEGDFNKIFFADEKRGAERSQNLMEAFRVALGRCNLANLGAPRNMFTWMKRVRGGTTIAERLDRFLANDKFRSLFGNIGIDPFRTILKKHQENSNNL
NPPPIREPFESPVEAVRPQLLEIKLCAAWFEKDDKGGIAWTICDSNRNKMQLPLAVESDYVEVVGAFNRELEDQSELCFFVEEIQLLSSSLGISSLSKCSRKNNSLAHDL
ARAIAKNGNFGFFGSHLLYGEEDDQFRREKSFPFWFSSCIPYEFGVFNILV