; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017719 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017719
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:7689872..7690594
RNA-Seq ExpressionLag0017719
SyntenyLag0017719
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.1e-2153.47Show/hide
Query:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWLHYM
        LGNA+G FEDV+S      W + LRVRVR +++KPL RGIK+NLDGPM   WIP++YERLP+F   CG + H  KDCS       S S   QYG WL + 
Subjt:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWLHYM

Query:  G
        G
Subjt:  G

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.6e-2555.88Show/hide
Query:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSS-SIHQYGGWLHY
        LGNA+G+F DVD       W A LR+RV I+I KPL+RGIKIN+DGPM   WIP++YERLP+FC FCG+IGH + DC   Y  AQ  S +  +YG WL +
Subjt:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSS-SIHQYGGWLHY

Query:  MG
        +G
Subjt:  MG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-1845.3Show/hide
Query:  FFGPVTGLVQLGNGGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQA
        FF    G +       LGNA+G FE+ D  +    W + LRVRV ++I KPL+RGIK+NLDGP+  +WIP++YERLP+FC  CGL               
Subjt:  FFGPVTGLVQLGNGGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQA

Query:  QSSSSIHQYGGWLHYMG
         SS   HQYG WL Y G
Subjt:  QSSSSIHQYGGWLHYMG

XP_028117212.1 uncharacterized protein LOC114314884 [Camellia sinensis]8.2e-1442.57Show/hide
Query:  GGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIH-QYGGW
        G  LGN +G F D++  +G   W   L +R+ INI KPL+RG+K+ L G     WI ++YERLP FC  CGL+GH   DC     +      +  QYG W
Subjt:  GGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIH-QYGGW

Query:  L
        L
Subjt:  L

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]1.4e-1342.2Show/hide
Query:  GGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWL
        G  +GN +G  E+VD       W   LR+RVR+NI +PL RGI + L G     WI   YERLP FC  CG +GH  KDC     Q    +    +G WL
Subjt:  GGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWL

Query:  HY---MGRS
        H    MGR+
Subjt:  HY---MGRS

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054812.0e-2153.47Show/hide
Query:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWLHYM
        LGNA+G FEDV+S      W + LRVRVR +++KPL RGIK+NLDGPM   WIP++YERLP+F   CG + H  KDCS       S S   QYG WL + 
Subjt:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWLHYM

Query:  G
        G
Subjt:  G

A0A6J1D765 uncharacterized protein LOC1110179023.4e-1345.45Show/hide
Query:  LGNAVGSFEDVDSRNGFHFWIAR-LRVRVRINILKPLKRGIKI-NLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWL
        LG  +G  E+++  +G   W    +RVRV+I++ KPL+RGIK+ N DG   D W P+RYE+LP+FC  CG IGH  ++C Q  K   +++S  QYG WL
Subjt:  LGNAVGSFEDVDSRNGFHFWIAR-LRVRVRINILKPLKRGIKI-NLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWL

A0A6J1DU55 uncharacterized protein LOC1110231352.2e-2555.88Show/hide
Query:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSS-SIHQYGGWLHY
        LGNA+G+F DVD       W A LR+RV I+I KPL+RGIKIN+DGPM   WIP++YERLP+FC FCG+IGH + DC   Y  AQ  S +  +YG WL +
Subjt:  LGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSS-SIHQYGGWLHY

Query:  MG
        +G
Subjt:  MG

A0A6J1DX30 uncharacterized protein LOC1110248745.4e-1945.3Show/hide
Query:  FFGPVTGLVQLGNGGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQA
        FF    G +       LGNA+G FE+ D  +    W + LRVRV ++I KPL+RGIK+NLDGP+  +WIP++YERLP+FC  CGL               
Subjt:  FFGPVTGLVQLGNGGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQA

Query:  QSSSSIHQYGGWLHYMG
         SS   HQYG WL Y G
Subjt:  QSSSSIHQYGGWLHYMG

A0A6P9EID8 uncharacterized protein LOC1183488566.8e-1442.2Show/hide
Query:  GGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWL
        G  +GN +G  E+VD       W   LR+RVR+NI +PL RGI + L G     WI   YERLP FC  CG +GH  KDC     Q    +    +G WL
Subjt:  GGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGHFAKDCSQFYKQAQSSSSIHQYGGWL

Query:  HY---MGRS
        H    MGR+
Subjt:  HY---MGRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTAAGACGTTCAAGGCAGCTTGGAATGTGGACAAAGGATTACAAGTTGAATCGTTAGATTCATTTTTTGGACCTGTCACTGGATTGGTACAACTTGGAAATGGTGG
AACGTTGGGGAATGCAGTGGGTTCCTTTGAAGATGTTGATAGCAGGAACGGTTTTCACTTTTGGATTGCAAGGTTGAGAGTTCGTGTGCGAATCAATATCTTGAAGCCTC
TTAAACGTGGGATTAAAATCAATTTGGATGGCCCAATGAACGATAGTTGGATTCCGATGAGGTATGAACGTTTGCCTGAGTTTTGTTCTTTCTGTGGATTAATCGGACAT
TTTGCCAAGGATTGCAGTCAGTTTTATAAGCAAGCCCAATCCAGTAGCTCTATTCACCAATACGGGGGATGGCTTCACTACATGGGTCGGAGTGGTATGATCACAAGATC
TCTGGCTACAGATCAAAGAAATACGACGAGTCCTAGATCTGGTCTTTCAATTGATCGAAGTCCCAAATCTTCAACCGTTCTAAGAAACCTTTGTTGGGTTTTATGTCCTA
AAACTCGTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTAAGACGTTCAAGGCAGCTTGGAATGTGGACAAAGGATTACAAGTTGAATCGTTAGATTCATTTTTTGGACCTGTCACTGGATTGGTACAACTTGGAAATGGTGG
AACGTTGGGGAATGCAGTGGGTTCCTTTGAAGATGTTGATAGCAGGAACGGTTTTCACTTTTGGATTGCAAGGTTGAGAGTTCGTGTGCGAATCAATATCTTGAAGCCTC
TTAAACGTGGGATTAAAATCAATTTGGATGGCCCAATGAACGATAGTTGGATTCCGATGAGGTATGAACGTTTGCCTGAGTTTTGTTCTTTCTGTGGATTAATCGGACAT
TTTGCCAAGGATTGCAGTCAGTTTTATAAGCAAGCCCAATCCAGTAGCTCTATTCACCAATACGGGGGATGGCTTCACTACATGGGTCGGAGTGGTATGATCACAAGATC
TCTGGCTACAGATCAAAGAAATACGACGAGTCCTAGATCTGGTCTTTCAATTGATCGAAGTCCCAAATCTTCAACCGTTCTAAGAAACCTTTGTTGGGTTTTATGTCCTA
AAACTCGTAGATAG
Protein sequenceShow/hide protein sequence
MRKTFKAAWNVDKGLQVESLDSFFGPVTGLVQLGNGGTLGNAVGSFEDVDSRNGFHFWIARLRVRVRINILKPLKRGIKINLDGPMNDSWIPMRYERLPEFCSFCGLIGH
FAKDCSQFYKQAQSSSSIHQYGGWLHYMGRSGMITRSLATDQRNTTSPRSGLSIDRSPKSSTVLRNLCWVLCPKTRR